Oncorhynchus keta (chum salmon): 118381149
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Entry
118381149 CDS
T09424
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7-like isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118381149
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118381149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
118381149
NCBI-ProteinID:
XP_052319507
LinkDB
All DBs
Position
15:complement(18780133..18927134)
Genome browser
AA seq
3187 aa
AA seq
DB search
MADPGMLSLFGDDTNLFSDGLEGLGDCGFPQGQTNPIGQQEHQGYGSLSSNSLHHPSQAG
PGQPKIGHPYDPFAGYEQQQGNSPAVNGMVTPHSRYHNSPQQPGGGHHVYPRAQGDGHGQ
SFPDGGAVWGPQTGPGQGRPPFQQQQASPQAPSHQQHGPSGPQAPSHQQHDPSGPQDHGH
RMGPYMGRSDYATMQGHPCQTQTPPRINHFPPGMGQEPNHYMGHVGLQQNSSMTGHPAQQ
QQPPQQFLHRPGQGPVHTQDHMASHTSHQQHQGLAGRPHQNMGFNMHGQAASPGAVTSSG
PYPPYPQYGNLNQGLAGSAGMSPGMSLSSTSNNNSCASGPMGPDQVQCYPNTGGGPQCYP
DPQVHQQPVHPNQIPGQPMHPSQPQATPHKQPHLPTPPHGSYGSPTSMSPMKGMGTTAVT
PLPQQVQPPSAGLAPEVGGYPGVPLQAPNPVAPPQRNTTPLGVQQPQHHSQHLSHPQQHP
HMPPSQQLYQGMSPNQRGPLDQVRPPGPMAHGEHPGPQDQRLLTPQQQAPKSGLQPPPMA
FQQQVHPAQTALPPLQAQTHLAGPHHQSSPPNQPPWAPAGHQSPPTPQKVPHIQYSTSSE
MTASDRTPASGANLQPANCDKKPTEQKPKKKKAKVMVEGEKKPKKKKGCIEECGEEGKRK
VGDGPWVEVNCLTGALEESLMVKTKKKPKEPKAPKTLKTPKTPKEPKEKAKSITPKVKMP
KKPRSTKKVESAEGIGSSVKETKRMREPSVSSDVEKSPPGPSDEDDDDDGIQKRRSSRQV
KRKRYTEELEFRISDDDGDVSPAPKSPFNTSEQQEVETEGPVVEKILSIRMGKKEMESGE
KMEVEEFYVKLKSFSYLHCRWADLEELEKDKRIHQKVKRFRAKQALPTFVTEMDDEPFNP
DYVEVDRVLDVSESRDENGEPVKLYLVKWCSLPYEEITWELKADIDQAKIDEYEAVAARQ
PETKRVERPPTENWHKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGK
TIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAY
EMNYRDVQGRVIKGAYKFHAVITTFEMILTDCPELRSVSWRCVVIDEAHRLKNRNCKLLE
GLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQ
AILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGG
AWGGGGAQVPNLLNTMMELRKCCNHPYLINGAEEKILDDFRENHHAEMPQFHLQAMIQAA
GKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAI
DRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVPQLSKKEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILLRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPD
FWQKWAKKAELDMEAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPL
TKLRRPQDRAHGYPRSECFRVEKNLLVYGWGRWGDVLSRGRFKRPLQEQDVETICRALLA
YCLLHYRGDENIKRFIWDLITPSEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQL
PRAEWLASCNPDLLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVISDHADRILEGRDSS
EMDIWIPQPFHAEVPADWWDSEADKSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAK
AIAAEQRGADMMADGPEGEDEDPEYKPLRMTFKDEMEDFANSPLDDKDETVDVESGESKP
GEDVAGSRGAGRLYWPATSALTARLRRLITAYQRTHKREQLRKEAMARPDGRRRRRPREH
LFSMVTDGGAYVQEDGAFMAEGSPYMAKGGAFIPEATVLPAEGGVAFKEKRQRWTRREES
DFYRVVSTFGVIYDTDRQLFDWTQFRAFARLDKKSDESLEKYYFSFLAMCKRVCRMQVKA
NTELPDPTLIIDPITEERASRTLYRIELLRRIREQVLPNPLLGERLRLCQPSSDLPEWWA
CCRHDHDLLLGASKHGVSRTDYHILNDPALGFLEAHRKFTKGASAGVPQPPRDGALSTAS
SSSTEQATATAGAEKSLPVQEEEEGKEMKEEGDDIPCTKPEKPDEVKEEEMEAKKQEKAK
SPKKVKDEEEEKGEEEDREEKVEVTGDADGETSKEAKSEKECKAPTEETKDQDKKLDFQE
KPESPKASESPKASESPKASESPKASESPKASESPKASESPKASESPKASESPKASESPK
ASEQQGTKKEESDEKEGSPAMSPKPVAEKGPGEEKMEEDDKSEKSSQAEAGATSEQKNFD
EESNASLSTTARDETRDGFCPEEEPSAILALQERATSSFWPKDRVMINRMDNICDAVIKG
KWPANRRQFFDFPGLLPGYPGPMTSESPMPRQSLAELSMAAAAQTNFSGSEDLTLSPQVN
EDALSISLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHAAESQSQAMDLTKGILH
QHHKSSAPSPVSYSSSMVSPAALKAQMELLQAATPSRHRANCSLAEADLPTRRRRGRRKN
VEGLELLFMRGATEDSERTKASVKGLQMPPRSYRHNIPSTSARVPSVSAMEDREAGTPSN
KDLSDWLRQHPTYTMDMPTAYTPKSEETLLSSQFPKPKQKRHRCRNPNKIDINTLTGEER
VPVVNRRNGRKMGGAMAPPMKDLPRWLLENSDFAVAPDWTDIVKQSGFLPEAMFDRLLTG
PLVREEGVRRRGRRPKSEIAKATAAASAASSGGLNPLLINGLFGGMDLTSLQGLQSLQSL
QLQLMGFPGMGVADAKHPSAMLPLMLPGMAGMGVLPNMFGLGGLFASNLAAASHAAASNG
TNNEDDSDETLKRDAREGGEEQDEEKDDTGEEEESSKAIGEAAALNVAAAAMAASGMSAN
SLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTLPGFPPTALTDLQSAMAGAMGVASGAQGR
EKEPSQVALDCPAAADPETADDSDSAESLEKTAELSALEDETSALAGEADSPEDLEEGED
ALEEEEK
NT seq
9564 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccggggatgttgagcctgtttggggatgataccaacctgttctcggacggg
ctggagggcctgggggactgtggcttcccccagggccagaccaaccccataggacagcag
gagcaccagggctacgggtcgctctcctccaactcactccaccacccctcgcaggctggc
cccggacagcccaagattggccacccctacgacccctttgcaggctacgagcagcagcag
ggcaacagtcccgccgtcaacggcatggtgacaccgcactcgcgctaccacaacagcccc
caacaacccggaggggggcaccatgtctaccccagagcccaaggcgatgggcacgggcag
tccttccctgacggaggagccgtatggggcccccagactggccccgggcagggcaggcct
ccattccagcagcaacaggcatccccccaggccccctcccaccagcagcatggaccctct
gggccccaggccccctcccaccagcagcacgacccctcagggccccaggaccacggccac
cgtatgggcccctacatgggccggtccgactatgccactatgcagggccacccttgccag
acccagacgccacccaggatcaaccacttccctccaggcatgggccaggagcccaaccac
tacatgggccacgtggggctccagcagaactccagcatgacaggccacccggcacagcaa
cagcagcccccccagcagttcctccaccggcccggccagggccctgttcacacccaggac
cacatggcctcccacacctctcaccagcagcaccagggcttggccgggaggccacaccag
aacatggggttcaacatgcacggccaggcagcctctcctggtgctgtaaccagctcaggc
ccgtaccccccctacccccagtacggcaaccttaatcagggattagccggcagtgcaggg
atgagtcccggcatgagcctcagcagcaccagcaacaacaacagttgtgccagcgggcct
atggggccagaccaagtccagtgttaccccaacacaggggggggcccacagtgctacccg
gatcctcaggtacaccagcagcctgtccaccccaaccaaatccctggccagcccatgcac
ccctcccagccacaggccaccccccataagcagccccacctccccacaccacctcatgga
tcttacggctctcccacctccatgtcccccatgaagggcatgggaaccaccgcggtcaca
cctctgcctcaacaggtccaaccccctagtgcaggtcttgctcccgaggtaggggggtac
cccggagtgccactccaggcccctaaccccgtggccccccctcagagaaacaccactccc
ctgggcgtgcagcaaccgcaacatcattcccagcacctctcccacccacagcagcacccc
cacatgcccccgagccagcagctctaccagggtatgtcccccaaccaaagaggccctctc
gaccaggtgagacctccaggtcctatggcccacggtgagcatccagggccacaggaccag
cggctgctcactccccagcaacaggcacccaaatctgggctgcagcctcctcccatggcc
ttccagcagcaggtgcacccagcccagactgctttgcccccattgcaggctcagacacat
ctggccggcccccaccaccagagctccccgcccaaccagccaccttgggcgccggcagga
caccagtcgcctccaaccccccagaaagtgcctcacattcagtattctacgtcatctgag
atgacagcttctgacaggacacccgcttcgggggctaacctccagccagccaactgtgac
aagaagcccaccgagcagaaaccaaaaaagaagaaagcgaaggtgatggtggagggggaa
aagaagcccaaaaagaagaaaggatgtatagaggaatgtggcgaggaggggaaacgaaag
gtcggggacggtccctgggtggaggttaactgtctgacaggtgccctggaggaatcactt
atggtgaagacaaagaagaaaccgaaggagcctaaagcgcccaagactctgaaaacaccc
aagacccccaaagagcccaaggagaaggccaagagcattacccccaaggtcaagatgccc
aagaagcccagaagcactaagaaggtggagtcagcggagggcattggcagcagtgtgaag
gagactaagaggatgagggagccctctgtcagctccgatgtggagaagtcacccccaggc
ccctccgatgaggacgacgatgatgacggtatccagaagcgtcgttccagtcgtcaggtg
aagaggaagcgctatacagaggaactggagttcaggatctcagatgatgatggagatgtt
tcccccgctcccaagtcgcccttcaacacctctgaacagcaggaggtggagacagagggg
cctgtggtggagaagatcctgtccatacgcatggggaagaaagagatggaatctggagag
aaaatggaagtggaagaattctatgtcaaattgaagagcttctcctacctgcactgtcgc
tgggcagatctggaggagctggagaaggacaaaaggatccaccagaaggtcaagcggttc
agggccaaacaggccctccccacctttgtgacagagatggatgacgagcctttcaaccca
gactacgttgaggtggaccgggtactggacgtgtcagagagcagagatgagaacggagag
cctgtaaagctgtacctggtgaagtggtgttccctgccctatgaggagataacctgggag
ctgaaggccgacatcgaccaggccaagatcgatgagtacgaggccgtggcagcccgtcag
cccgagaccaaacgcgtggagcgacctcccaccgaaaactggcataaatccgagagttcc
agggattataaaaacgacaacgcacttagggaataccagctggagggagtgaactggctg
ctcttcaactggtacaatacacggaactgcatcctagcagatgaaatgggcctgggcaag
accatccagtccatcacattcctctatgagatctacctgaaggggatccacgggcccttc
ctggtcatcgcccccctctccaccattccaaactgggaaagggagttccgcacctggacc
gaactcaacgtgatcgtctaccacggcagccaggccagccgcaagaccatccaggcctac
gaaatgaactaccgcgacgtgcagggtcgtgtgataaagggagcgtacaaattccatgcg
gtcatcaccacatttgagatgattctgacagactgtccggagctgcgtagcgtctcgtgg
cgctgtgtggtcatcgacgaggctcaccgcctcaagaacaggaactgcaaactgctggag
ggtcttaagatgatggacatggagcacaaggtgctgctgaccgggacccccctgcagaac
acggtggaggagctcttcagtctgctcaacttcctggagcctgaacgcttcccctctgag
aacaccttcatgcaggagtttggagacctcaagactgaggagcaggtccagaagctgcag
gccatcctgaagcccatgatgctgcgacgtctcaaggaggacgtggagaagaacctggcc
cccaaggaggagaccatcatcgaggtggagctgaccaacatccagaagaagtactaccgg
gccatcctggagaagaacttctccttcctgtctaaaggtggaccgggaggaggaggtggc
gcatggggaggtggaggtgcacaggtccccaatctgctcaacaccatgatggagctgagg
aagtgctgcaaccacccctacctcatcaatggtgcagaggagaagatcctggacgacttc
cgtgagaaccaccatgccgagatgccccaattccacctacaggccatgatccaggcagcg
ggcaagctggtgctgatcgataagctgctgcccaagctgaaggccgggggacacagggtc
ctcgtcttctcccagatggtgcgctgcctggacatcctggaggactacctcatccaaaaa
cggtacccgtatgagcgtatcgatggtcgtgtgaggggtaacctccggcaggctgcaatt
gaccgcttctctcgtccggactctgaccgctttgtattcctgttgtgtacccgggccgga
ggtctgggcatcaacctgaccgctgccgacacctgcatcatctttgactctgattggaac
ccccagaatgatttacaggcgcaagccagatgccacaggattggccagagcaaggcagtg
aagatctacaggctgatcaccaggaactcctatgagagggagatgtttgacaaggccagc
ctcaagcttggcctcgacaaggctgtgctgcagtccatgagtggccgagaaaatgcagcc
aacggggttccacagctgtctaagaaggaggtggaggacctcctccgtaaaggagcctac
ggagctctgatggacgaggaggacgagggctcaaagttctgcgaagaggacattgaccag
atcctcctgagacgaacccagaccatcaccattgagtccgagggcaaggggtccaccttc
gccaaggcgagctttgtggctgctgggaacaggacagacatttccctggaggacccggac
ttctggcagaagtgggccaagaaggcggagctcgacatggaagccatcaatggacggaac
acccttgtgattgacactcccagggtgcggaagcagacacggcactacagctcaatgaag
gaggacgaattggcagagttttccgagctggaaagtgacggcgagaatgagaagcccttg
accaaactcaggcgaccccaggaccgagctcacgggtacccccgcagcgagtgcttcagg
gtggagaagaatctgctggtttatgggtggggtcgctggggagacgtcctgtcccgcggg
cgtttcaagcggcccctgcaggaacaagacgtggagaccatctgccgcgccctgctggcc
tactgccttctgcactaccgtggcgacgagaacatcaagcgcttcatctgggacctcatc
acgccctctgaggacggacagagccgcacactcaccaaccactccggtctgtctactcca
gtaccgcggggtcgtaaggggaagaaggggaaaccagccccacctgcccctccccagctc
cccagggcagagtggctggccagctgtaaccctgacctgctactgcaggaggacagctac
aagagacacctcaaacaccactgtaacaaagttctcctgagggtccgtatgctctactat
ctgcgacaggaagtcatcagtgaccacgccgacagaatcctagagggaagagactcaagt
gaaatggatatctggatccctcagcctttccacgccgaggtgcccgccgattggtgggac
agcgaggcagacaaatcgctgctcatcggtgtcttcaaacacggctatgagaagtataac
tcgatgcgtgccgaccctgcgctgtgtttcttagagcgggtgggcatgcccgacgccaag
gccatcgctgcagagcagaggggggcggacatgatggcagatggtccggagggagaggat
gaagaccccgagtacaagcctctccgcatgacctttaaagatgagatggaggactttgcg
aactcgcccctggatgacaaagacgagactgtggacgttgagagtggtgaatctaaacca
ggtgaggatgtagcaggcagcagaggggcgggtcgtctgtactggccggcgacctcggcc
ctcaccgctagactccgccgcctcatcacggcctaccagcgcacgcacaagagggagcag
ctccgcaaggaagccatggcccggcccgacggacgccgccgccgccggccccgagagcat
ctcttctccatggtcacagacggaggggcctacgtgcaggaggacggagccttcatggca
gagggaagtccttatatggccaagggcggtgcttttatacctgaggcgacggtgctcccg
gcggaaggaggggtcgccttcaaagagaagcgtcagaggtggaccaggcgtgaggaatca
gacttctaccgggttgtgtccacgtttggtgtgatctatgacacggaccgccagctcttt
gactggacccagttcagggccttcgcccggctggacaagaagagtgacgagagcctggag
aaatactacttctccttcttggccatgtgcaaacgggtgtgtcgcatgcaggtcaaggcc
aacacagagctcccagaccctaccctgatcatcgaccccatcacggaggagcgcgcctca
cgcaccctctaccgcattgagctgctgcgtcgcattcgcgagcaggtgctgcccaacccc
ctgctaggtgagcgcctgcgcctctgccagcctagctccgacctgcctgagtggtgggcc
tgctgccggcacgaccacgacctcctcctgggcgcctccaagcacggcgtgagccgcact
gactaccacatcctcaacgacccggcgctgggcttcctggaggcccacaggaagttcacc
aagggggcatcggctggggtgcctcagccgccccgcgatggagctctctctactgcttct
tcctcttctactgagcaggccacagctactgctggtgctgagaaatccttacctgtccaa
gaggaggaagaagggaaggagatgaaagaggaaggtgatgatattccatgtactaaacct
gagaaaccagacgaagtcaaggaagaagagatggaggcgaagaagcaagagaaggccaag
tctcccaagaaggtgaaggacgaggaggaagagaagggagaggaggaagacagagaggag
aaagtggaggtcaccggcgacgctgacggagagacttccaaggaggccaaatccgagaag
gagtgcaaagctcccactgaggagaccaaggaccaggacaaaaagctggacttccaggag
aaaccagagtctcctaaagcatcagagtctcctaaagcatcagagtctcctaaagcatca
gagtctcctaaagcatcagagtctcctaaagcatcagagtctcctaaagcatcagagtct
cctaaagcatcagagtctcctaaagcatcagagtctcctaaagcatcagagtctcctaaa
gcatcagaacagcagggaaccaagaaggaagagagcgatgagaaagaaggaagccctgcc
atgtctcctaaaccagtggctgagaaagggcccggtgaggagaagatggaggaagacgac
aagtctgagaagtcttctcaagctgaagcaggtgccacctcagagcagaagaactttgac
gaggagagcaacgcctcactgagcaccacagccagagatgagacccgcgacgggttctgc
cccgaggaagagccctctgccatcctggccctccaggagagagccacctcatccttctgg
cccaaggaccgtgtcatgatcaatcgcatggacaacatctgcgatgcggtcatcaagggc
aagtggcccgccaaccgacgccagttctttgacttcccgggcctgttgcctggatacccc
ggccccatgacgtctgaaagccccatgccgaggcagagcctggccgaactgtcgatggca
gcggccgctcagaccaacttcagtggcagcgaggacctcaccctctcgccccaggttaat
gaggatgctctgagcatatctttgccgaagcagcgtcgtcgcaggcggcggaaggttgag
atagaggcggagcgtgcggccaagcgcaggaacctgatggatatggtggcccagctcaga
gaatctcacgctgcagagtcccagagccaggccatggatcttaccaagggtattctgcac
cagcatcacaagtcttcagcgccgtccccggtgagctactccagcagcatggtgtcacct
gctgccctcaaggcacagatggagcttctgcaggcggccacaccctccagacacagggcc
aactgctcattggccgaggctgacctgcccaccaggaggaggcggggccgcaggaaaaat
gtggaggggctggagctgctgttcatgagaggagccacggaggattcagagaggaccaaa
gcttcagtgaaggggttgcagatgcccccacgttcctaccgccacaacattcccagcacc
tccgcccgtgtcccctctgtcagcgctatggaggacagggaggctggtaccccctctaac
aaagacctgagtgactggctcagacagcaccccacatacaccatggacatgcctactgcg
tacacaccaaagagtgaggaaactctcctctcctcccagttccccaaacccaagcaaaag
agacaccgctgccggaaccccaacaagatcgacatcaacacgctcaccggagaagagagg
gttcccgtggtcaaccggagaaatggaagaaagatgggtggagccatggcccctcccatg
aaggatcttcccagatggctcctggagaactcagattttgccgtcgctccagactggact
gacattgtcaagcaatcgggcttcctccctgaggccatgttcgaccgtctcctgactggg
cccttggtgcgtgaggagggcgtccgtcgtcggggaagacgtcccaaatcggagatcgcc
aaggcaacagcggctgcctcggctgcatcctctgggggccttaaccccctgctgataaat
ggcctgtttggaggcatggacctcaccagcttgcagggcctacagagcctccagagtctg
cagctgcagctcatgggcttccccggcatgggggtggctgacgctaaacacccctcggcc
atgctgcctctcatgctgcctggcatggctggtatgggcgttctgcccaacatgtttggc
ctgggaggcctgttcgcaagcaacctggctgcagcctcccatgctgcagcctccaatggc
accaacaacgaggacgattcggacgagacattgaagagagacgccagggagggtggagaa
gagcaggatgaggagaaggacgacactggggaggaggaagagtcgagcaaggctattggg
gaggctgcggctctgaatgtggctgctgccgctatggccgcctccggcatgtcggctaac
tccctggccttcaatcccttcctgctctccaccatggccccggggctcttttccccctac
atgttcctgccccctggcctgggaggtctcaccctgcctggcttcccccccactgccctg
accgacctgcagagtgccatggctggagccatgggtgttgcctctggagctcagggcagg
gagaaggagcccagccaggttgccctggactgccctgctgctgcagacccagagactgct
gatgacagtgactcagctgagagcctggagaagactgcagagttgtctgcgctagaagat
gagacctctgcattggcaggggaagccgactcaccggaagacctggaggaaggagaggat
gcccttgaggaggaggagaagtga
DBGET
integrated database retrieval system
