Oncorhynchus keta (chum salmon): 118381288
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Entry
118381288 CDS
T09424
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 isoform X1
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118381288
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118381288
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118381288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
HA2_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
118381288
NCBI-ProteinID:
XP_052369964
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MADRSTMSEQDKHLMEKEICSDSETADCVEETFVFGEDLELNRFDGLPFSSRYYKLLQER
QSLPVWKAREEFLDILVNNRLVIVSGTTKTGKSTQIPQWCAEFCLSAQYQHGVAVSTQIH
SQQAVSLALRVADEMDVNIGHEVGYTMPLETCCSTDTVLRFCTDALLLREMMSDPMLEHY
GAIVIDQAHERTVSTDILLGLLQDILVHRPDLRVVILTVSSMTDRLLAHYGSNVPVVSLE
ALCPAEVVYSNCSSKDYFYSALRLVLEIHRTKEEGDVVLFLASAQEVVCARAILQREGTR
LGADLGELVPVVLCPGHGRTPPLLGEGMGSRGTVTTSCRRVFLSTSQGEDMFWAVDSVNF
VIDVGLEKRHVYHPRLRATSEVLRSISRYQADIRKQLIGPTGTDIRKQLIGPTGTDIRKQ
LTGPTGTDIRKQLIGPTGTDIRKQLTGPTGTDIRKQLIGPTGTDIRKQLIGPTGKCFCLY
PKERVLPVETSPQILDANLTFTILFLKRMEIAGLRHCDFITRPDPEGLMQSLEELDYLAA
LDDDGNLSEIGIIISELPLDAQMAKALLASCEFDCVNEVVTIAAMLSAPSCFLEPPVGRT
QEVQQCHRKFRHPEGDHFTLINIYNAFKYSQRETYFGVEKWCQDYHLNHRALQTADAIRS
ELTDILKRIELPISETSFGTKTNTLNIKRALLAGFFMQIARDVDGSGNYFMLTNRHMAQV
HPASSYGAKAHQLGFPEWVLFHEYTLSGNHGIRTVSEISPAVFIQTAPQYFYYNLPPSES
KDLLQHILDRDGSGRKDKQQTLTINSEAAQSYDRCVLQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggatagatcgaccatgtccgagcaggacaagcatttgatggagaaagagatttgt
tcggattcggaaaccgctgactgcgtggaagaaacgtttgtcttcggagaggatctggag
ctgaaccgatttgatggattgcctttctcctctcgttattataaactactgcaagagaga
cagtctctacctgtttggaaagctagagaggaatttttggatatcctggtgaacaatcga
cttgttatagtatctggtacaactaaaactgggaaaagtacacagatcccccagtggtgt
gcagagttctgcctgtcggcccagtaccagcacggcgtggctgtgtctacccagatccac
tcacagcaggcggtgagcctggccctcagggtggccgatgagatggacgtcaacatcgga
catgaagtgggctacaccatgcccctggagacctgctgttctactgacactgtgctcagg
ttctgtacagatgccctgctactgagggagatgatgtctgaccccatgttggagcactat
ggggccatcgtcatcgaccaggcccatgagagaaccgtcagcacagacatactgctggga
ctgctccaggacatcctggtccatagaccagacctgagggtggtgatcctgactgtgtcc
tccatgacagacaggctcctggcccactacggtagtaacgtccctgtggtcagtctggaa
gccctctgtccagctgaggtggtctacagtaactgtagtagtaaagactacttctactct
gctctgagactggtactggagatccaccgcaccaaggaggagggagatgtggtgctgttc
ttggcctcagctcaggaggttgtctgtgcccgtgctatcctccagagagagggaaccaga
ctgggggcagaccttggggagctggtgcccgtggtcttgtgccctgggcatggtcggaca
ccccctctcctgggggaggggatggggagtaggggaaccgttacgaccagttgccggagg
gttttcctctccacaagccagggagaggacatgttctgggctgtggactctgttaacttt
gtcatcgacgtaggactggagaaaagacatgtgtatcatcccaggttaagggccacctct
gaagtactacgatccatcagcagataccaggctgatatcaggaagcagctgattggacca
acaggtactgatatcaggaagcagctgattggaccaacaggtactgatatcaggaagcag
ctgactggaccgacaggtactgatatcaggaagcagctgattggaccgacaggtactgat
atcaggaagcagctgactggaccgacaggtactgatatcaggaagcagctgattggaccg
acaggtactgatatcaggaagcagctgattggaccgacagggaagtgtttctgcctgtac
cctaaggaaagagtactccccgtagagacatcccctcagatcctggacgccaacctcacc
ttcaccatcctcttcctcaagaggatggagatcgcagggctgagacactgtgacttcatc
accagaccagatccagagggtctgatgcagtcgctagaggagctggattacctcgcggca
ttggacgacgatgggaacctatcagagatcgggatcataatctctgagttgccattggac
gctcagatggccaaggctctgctggcgtcctgtgagtttgattgtgtgaatgaggtggtg
accatcgcagctatgctatcagcgccaagctgcttcctggagccacctgttggcaggacc
caagaggtacaacagtgtcacagaaagttccggcaccctgagggagaccacttcaccctc
atcaacatctacaacgccttcaagtacagccagagagagacatacttcggcgtagagaag
tggtgtcaggactaccatctgaaccaccgcgcccttcagacggcagacgccatcaggtca
gagttgactgacatcctgaagagaatagagctgcccatctccgagacgtccttcggaacc
aagaccaacacactcaacatcaagagagctctgctggcagggttcttcatgcagattgcc
cgtgatgtggatggttcaggaaactacttcatgctgaccaacagacacatggctcaggtc
caccctgcctccagctatggggccaaggcacatcaattgggttttccagagtgggtgctg
ttccatgagtatactctctcgggaaaccacggtatccggacagtctctgaaatctcccct
gcagtgttcatccagacggctcctcagtatttctattacaacctgcctcctagtgagagt
aaagacctactacagcacattctggaccgggacggatctggacgcaaagacaagcaacag
accctgacaatcaacagtgaagccgctcagtcttatgacagatgtgtgctacagtga
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integrated database retrieval system
