Oncorhynchus keta (chum salmon): 118381309
Help
Entry
118381309 CDS
T09424
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118381309
04020 Calcium signaling pathway
118381309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118381309
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118381309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
118381309
NCBI-ProteinID:
XP_052382048
LinkDB
All DBs
Position
10:complement(75796402..76010721)
Genome browser
AA seq
2074 aa
AA seq
DB search
MVILLNCVTLGMYQPCENIDCSSDRCKVLQAFDVFIYVFFAVEMVVKMMALGIFGHRCYL
GDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTL
PMLGNVLLLCFFVFFIFGVIGVQLWAGLLRNRCYPKENFTLSKDISLPRPYYMADEDDER
PFICSLAQDNGIMACTDVPARRELGRTCCLDKDDVTHRQGLGLSPEPLVNGSVSGPGLCV
NWNQYYTRCHTGHSNPHKGAINFDNIAYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIY
FILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQAHSSSTLASMTEPSAGCYE
SVFQLVCHVLRKARRRSMALCNRLLGRPKEVKGAGRRGGGEKTNVNGGGRGVGGERRGQH
RQAVHCPHHTKPDHASPGDSIALTLSPSTDGCPHCTNALSISDGAGPADSLANLEVEEGA
LEKTDGEGSKCDAGKEEVKDAAPAKVSGGCRRGCGKLWEETRLKLLGIVESKYFNRGIMI
AILINTISMGIEHHNQPEELTNVLEICNIVFTSMFAMEMILKITASGCFNYLRNPYNVFD
GVIVIISVCEIIGQSDGGLSILRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCML
LMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNTVLY
NGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSEEDSSPSNFDES
EKLNDSLKLSDPKICTLTPNGHLELTTLTPVMTPRGSYPTDRLTYALGSRKSSVMSLGKA
NLEQRRSFSLHHGRSSLHHHWGRPPPPQSAWNRRSSWNSLGCPSRGVGGMGAGVVGGSLR
VRSPHSHIHSLYHSAEHEFLLSPALRLPPHHAPPLPLLSRRNAIRHRDRRALSLELPNML
QVPGGPPSHPNPRMRSVSGGGSSGSGGMVVEHHDCNGKAPSPVMGHQTAQLLTEVFPQLN
LAKDRSDLDEEIDYSLCFRIQKMMEVYRPDWCEKREDWSVYLFSPQNKFRLLCQSIIAHK
LFDYVVLSFIFLNCITVALERPKILQSSLERLFLTVSNYVFTAIFVAEMTVKVVSKGLYL
GEKAYLKSSWNVLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGL
KLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCLGLEVKNITNKSDCLQA
NYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPSINNNPWMLLYFI
SFLLIVSFFVLNMFVGVVVENFHKCRQNQEVEEAKRREEKRQRRMEKKRRKAQKLPYYTN
YSHGRLMIHTLCTSHYLDLFITFIICINVITMSLEHYSQPQSLETSLKYCNYFFTTTFVV
ESVLKLIGFGFRRFFKDRWNQLDLSIVLLSVMGIILEEIDYNASLPINPTIIRIMRVLRI
ARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNADYPC
EGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPGPSDYPCHAGLQFISPMYF
VSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELELAQGQLQLPTCCMGGLG
TGLVVAGASGAPGGGGGLEGGTRQGQGVGLMTGAVVDHSGVTPPHRGGERHEGHRRHHRR
KLYSPAQVCAQESQWLDSVSLLIKDSFEGEMLMIDNLSGSVFHHYSSTSSPVWKDYKGNL
QEIRLAEVEQASLMSEQFSDKSSSLALPDDLSLDDHSDYQLLVRDGKEERGSSDSHSSEE
LRGIQAGCGGRWGHGGTRPHSRGPEDGVGFLLEVGAQPQFQSQSLQFLHHNRDGDGHHSD
QVGSVGCRGSSSPLFHLPVEFFHPATATAVPHPSTGRGRPRGREASRLPSPASWSSLRSP
GANNSVLDSPGATSRVLDSQGAKSKVLDSSGANSRILVSQHLSHSDSSLATGSSEGSLQT
TLEEGLSFSVSPSRRLGTLPWLCLSSALSPPSPR
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atggtgatattactcaactgtgtgaccctgggcatgtaccaaccctgtgagaacatagac
tgctcttcagaccgctgtaaggtactacaggccttcgatgtgttcatctatgtcttcttt
gccgtggaaatggtggtgaagatgatggccctcggaatctttggccatcgctgttacctg
ggtgacacgtggaaccgtctggatttcttcatcgtcatggcagggatggtagaatactcc
ttggacctccagaacatcaacctctcagccatcaggacagtcagggtcctcagacccctc
aaagccatcaacagagttccaagtatgcgtatcctggtgaatctcctcctggacactctc
cccatgcttgggaatgtcctgctactctgtttcttcgtcttcttcatcttcggcgtcatt
ggagtgcagctgtgggcggggctactgaggaaccgctgctaccccaaggaaaacttcacc
ctttctaaggacatctccctgcctcgcccttactacatggcagacgaggatgatgagcga
cccttcatctgctctctcgcccaggacaacggcatcatggcgtgcaccgacgtcccggcc
cgccgagaactaggacgtacctgctgcctggacaaggacgatgtgacacacagacagggt
ttggggctgagtcctgaacccctggttaatgggtcagtgagtgggcctggactgtgtgtc
aactggaaccagtattacacacgctgtcacacgggccacagcaacccacataaaggagcc
atcaacttcgacaatatcgcctacgcttggatcgtcatctttcaggtgatcaccctggaa
ggctgggtagagatcatgtactatgtaatggatgctcactccttctacaacttcatctac
tttatactgctcatcatcattggttctttcttcatgatcaacctgtgcctagtggtgatc
gccacccagttcagtgagaccaagcagcgggagcaccagctgatgcaggagcagagagcc
caggcccactcttcctctactctagccagcatgactgagccctcggcaggctgctatgag
tccgtcttccagctggtctgccacgtcctccgcaaggcccgcaggaggtccatggcgctc
tgtaaccgactgttggggaggcccaaggaggtgaaaggagcagggagaagaggaggagga
gagaagaccaacgtgaatggaggaggaagaggagtaggtggagagaggagagggcagcac
agacaggcggtccactgtccccatcacaccaagccggaccacgcctccccaggagactcc
atcgccctcaccctctccccctccaccgacggctgccctcattgcaccaacgccctgtca
atcagcgacggggcgggacctgccgacagcctggccaatttggaggtggaggaaggagct
ttggagaagacggatggggagggcagcaaatgcgatgccgggaaggaggaagtgaaagac
gcggctcccgctaaggtttctgggggatgtaggcgggggtgtgggaagctgtgggaggag
acgaggttgaagttgttggggatcgtggagagcaagtacttcaatagaggaattatgatc
gctatcctcatcaataccatcagtatgggcatcgaacaccacaaccagcctgaggaacta
accaacgtgttggagatctgtaacatagtattcactagtatgtttgccatggagatgatt
ctgaagataacagcgtccggatgtttcaactatctgagaaacccctacaatgtgttcgac
ggtgtcatcgtcattatcagtgtgtgtgagatcatcggccagtctgacggaggtctgtcc
atattgaggaccttcagactccttcgtgtcctgaagctagtcaggttcatgccggcgctg
cgcagacagcttgtggtcctgatgaagactatggacaatgtggccaccttctgtatgctg
ttgatgctgttcatctttatattcagtatcttggggatgcatatttttggctgcaagttc
agcctgaagacagaggcaggagacactgttccagacaggaagaactttgactctctactc
tgggccatcgtcactgtgtttcagatcctcacccaggaagactggaacacggtgctgtat
aatggaatggctgccacctctcctctagctgctctgtacttcgtagctcttatgacgttt
gggaactacgtcctcttcaaccttctggtggccatcttggtagagggatttcaggctgag
ggagatgctaatcgctcctattcagaggaggacagttccccctctaactttgacgagagt
gagaagcttaatgattctctcaaactgtctgatcctaagatctgcactttgacccctaac
gggcacctggagttgaccacgttgaccccggtgatgacccccagggggtcgtaccccact
gacaggctgacttatgccctggggtcacggaagagcagcgttatgagtctgggcaaggcc
aacctggagcagaggagatcattctctctgcaccacggccgcagttccctgcaccaccat
tggggtcgccctccccctcctcagagtgcatggaaccgcaggtccagctggaacagcctg
ggttgtccctcccggggggtaggggggatgggagcaggtgtggtgggaggaagcctccgt
gtccgaagcccccactcccacatccactccctttaccactcagccgaacacgagttcctc
ctctcccccgctctccgcctcccccctcaccacgctccccctctccccctcctctcccga
cgcaatgccatccggcaccgggaccgccgcgctctctccctggagctgccaaacatgctc
caggtccccgggggacctccgtctcaccccaaccccaggatgaggagtgtttctggggga
gggagcagtggcagtgggggtatggtagtggagcaccatgattgtaatggaaaggctcct
agtcctgttatgggtcaccagactgcccaactcctaacggaggtcttccctcagctgaac
ctcgccaaggacagatcggacctggatgaggagatagactatagtctgtgtttccgtatc
cagaagatgatggaggtgtacaggcctgactggtgtgagaaaagagaggactggtctgtc
tacctcttctcaccacagaacaagttcagactgctatgtcagtccattatagcccacaag
ctctttgactacgtggttttatccttcatctttctcaactgtatcactgtagctctggag
agacccaagatactgcagagcagcttggaaagacttttcctcaccgtctccaactatgtc
ttcacagccatatttgtggctgagatgaccgtcaaggtggtctctaagggtctgtacctg
ggtgagaaggcctatctgaaaagcagctggaacgttctggatggtttcctggtctttgtg
tcgttgattgacattgttgtgtccatggcgggcggggctaagatcctgggggtgctgaga
gtgctcaggctgctcaggacactacgccctctcagggtgatcagtagagctccaggcctg
aagcttgtggtagagactctcatcacgtctctgaagcctataggaaacatcgtcctcatc
tgctgcgctttctttatcatcttcggcatcctcggagtgcagctgttcaaggggaagttt
tactactgcctgggtctagaggtgaagaacatcaccaacaagtctgactgtctccaggcc
aactacagatgggttcaccacaaatacaactttgataacctgggacaggctctgatgtct
ctgtttgtgctggcatctaaagacggctgggtcaacatcatgtaccatggtctggatgct
gtgggcatagaccaacagccgtctattaacaacaatccgtggatgctcctgtacttcatt
tccttcctcctcatcgtcagtttcttcgtcctcaacatgtttgtgggcgtggtggtggag
aacttccacaagtgcagacagaaccaggaagtggaggaggccaaaaggagggaggagaaa
cgacagagacgcatggagaagaagaggaggaaggcccagaagctaccctactataccaac
tatagtcatggtcgtctgatgatccacactctgtgtaccagccactacctggacctcttc
atcaccttcatcatctgtatcaatgtcattactatgtccctggagcactacagccaacca
cagtcattggagacgagtctgaagtattgtaactatttcttcaccacaacctttgtggtg
gaatctgtcctcaagctcatcggcttcgggttccgacgctttttcaaggacaggtggaac
cagctggacctgtccatagtgttgttgtcagtgatgggcatcattctggaggagattgac
tacaatgcttctctacccatcaacccgaccatcatcagaatcatgagggtgctgcggata
gcacgagttctcaagctattgaagatggctacaggaatgagagctcttctagatacagtg
gttcaggctctacctcaggtggggaacctgggcctgctgtttatgttgctgttcttcatc
tacgctgctctgggggtggaactgtttggagagctggtgtgtaatgctgactacccgtgt
gagggcatgagtcggcacgccaccttcgagaactttggcatggcctttctcaccctcttc
caggtctccaccggagacaactggaacggcatcatgaaggacaccctgcgtgagtgccct
ccaggacccagtgactacccgtgccacgctggactccagttcatctctcccatgtacttt
gtctctttcgtcctcaccgcccagttcgtactcatcaacgtggtggtggctgtgctcatg
aagcacctggacgactcaaacaaagaggcccaggaggatgctgagatggatgcagagatt
gagctggagctagcccagggacaactccaactacccacctgctgcatgggggggctgggc
actgggctggtcgtggctggagcctctggagcgcctggtggaggtggagggttggaagga
ggaaccaggcagggtcagggggtagggctgatgacaggggccgtagtggatcacagtgga
gtgacccctccccatagaggaggagaaagacacgagggacacagacggcatcacaggcgg
aagctgtactcacctgcacaggtttgtgcacaggagagtcagtggttggacagtgtatct
ctgctgataaaggactcatttgaaggagagatgctgatgattgacaacctctctggatct
gtcttccatcactactcctctacctcttctcctgtctggaaggactacaaggggaatctg
caagagatccgattggctgaggtggagcaggcgtctctgatgtcagagcagttttctgac
aagtcgtcatcactggcccttcctgatgatcttagtctggacgaccacagtgactaccag
ctcctggtcagggacggcaaggaggagagagggagcagtgactcccacagttctgaggaa
ttgagggggattcaggctgggtgtggagggcgttgggggcacggaggtactcgaccccac
agcagaggccctgaagatggggtaggattcctgctagaggtgggtgcccagccccagttc
cagagccagtctctccagttcctccaccacaacagagatggtgatggccatcacagtgac
caggttggcagtgtcggatgtagaggttcctcctctcctctcttccatctccctgtggag
ttctttcaccccgccacagccacagcggtcccccacccatccacaggacggggtagaccc
agggggagagaggcatccaggctgccatccccagcctcctggtcctctttgcgctcccca
ggggccaataacagtgtcctagactccccaggggccaccagcagagtcctagactcccaa
ggggccaaaagcaaggtcctagactcctcaggggccaacagtaggatcctagtttcccag
cacctgtcccacagtgactcgtccttggccacaggcagctccgagggaagcctccagacc
accctggaggaaggtctcagctttagcgtctccccctcgaggagacttgggactctcccc
tggctctgcctctcctctgccctctcccctccctcacctcggtga
DBGET
integrated database retrieval system
