Oncorhynchus keta (chum salmon): 118381397
Help
Entry
118381397 CDS
T09424
Symbol
ttll4
Name
(RefSeq) tubulin polyglutamylase TTLL4 isoform X1
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118381397 (ttll4)
04812 Cytoskeleton proteins [BR:
oke04812
]
118381397 (ttll4)
Enzymes [BR:
oke01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
118381397 (ttll4)
Cilium and associated proteins [BR:
oke03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
118381397 (ttll4)
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
118381397 (ttll4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
DUF7224
Motif
Other DBs
NCBI-GeneID:
118381397
NCBI-ProteinID:
XP_052348664
LinkDB
All DBs
Position
34:287420..366421
Genome browser
AA seq
1274 aa
AA seq
DB search
MASNGAEDKLNTRASCSRSSTLIIRAKSAVFHAADSPTRPFSSHEKKSLKSCASVPRVTS
DSIGQLNARVGQTQNNHLHTASGTPLQRAYNRSVPAATYLANKPQRPGSAAANLANGHSN
GHCQPTVLSKSTQISSADIISYRHNPGVLEPTVNSYRPSCNLESLNLRSRILVRKRALSP
QPAPYPTCPCPPKAERVPDSQNNAASQPAESTTTTSMPTNQSVPWTSGKLRDNSKGFMRP
TMGKVPSCPRQETTQTRDSAKPLSPQTKSASYCRSGDNGDGKTQTKFTHHPPNTVPLQDR
SSHHQDFSLDQTWRLQDPHQFESLMAADMEGHSQRLGFCAAVHGAPGAPHNTSTERIRKV
NSEVEFTEAVRKLTQSRSALTPHPRNGTVNSFTTGTPGSNVDPVQIGKAMTNSPVISVSH
SPAPAKPSVPLCLTMRDQPVSMETSSASGLDSNTTTNSSSTTASMAPLPHAGITPTQSST
QASATAISAAGITPTQSSTQASATAISTAGITLTQSYTQDSATASSGASSIPENTEMGSE
SASDTSQSQRPSVTSVTTQISAIHLTKERSVLSLQGGYSPSRSPPGLGEEQQAESPQLSS
PQSVAMQEDGDRGEEDYPDDELENDCSGDDDDEGSDCSSLNDASSTASIPVLPNITDEEL
MSPELEDEGELKPALVPSMFPLIPPTLYFSTANQRVEPLPPEQRKLLKWKMSTVTPNIVK
HTIARSHFKVTKRSHDWLGCWGHHMKSPGFKAIREYQKLNHFPGSFQIGRKDRLWRNLSK
MQAQFGKREFSFFPRSFVLPQDIKLLRKAWEDSGSRQKWIIKPPASARGIGIQVIHKWSQ
MPCKRPLLVQKYLHKPYLISGNKFDLRIYVYVTCYDPLRVYIFQDGLVRFASCKYSSSMK
SLGNKFMHLTNYSVNKRNSDYQNNDSDKACQGHKWALKALWHYLGCKGVNTTLIWEKIKD
IVMKTIIASDPYVNTLVKLHLRSPYSCHELFGFDIMLDENLKPWVLEVNISPSLHSSTAL
DVAIKGQMIRDVLNLAGFLLPQREEVLPSASSSASSLCGGTRERSRPEISTDEKVKRAFY
LSQRFADQVQSCSRLKSQGTTGKFPRQEVDFFSSILDVLTPEDVRVLAETEDELSRKGEF
ERVFPSHCSSRYLRFFKQPRYLNILLNQWETKYGQNRREGVCVLRSLCQRGVHLGTTDPA
HLWSKSTYVPKSDHPRQEPSRSSVVVSHRTRPQPDQEEYCFSQEVTTSLLGSSSLSLTTE
STASVPPRDEELEG
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaatggagctgaagacaagttgaatacaagggcctcctgctcccggtcatca
actctcattattcgagccaagtcagcagtgtttcatgctgctgacagtcccactaggccc
ttcagctcgcatgagaagaagtcccttaaatcctgtgccagtgtcccccgggtcaccagt
gactctataggtcagctgaatgcgagggtgggtcagactcagaacaaccacctccatact
gcctcagggacccctctacaacgtgcctacaaccgttctgtgcctgctgccacttaccta
gctaacaagccacagcgtcctggtagcgcagctgctaatttagctaatggtcatagtaat
ggtcactgtcaaccaactgttctctctaagagtacacagatatctagtgctgacattatc
tcatacagacataaccccggtgtgttagagccaaccgtaaatagctatcggcccagctgc
aacttggaatcactaaatttaagatcacggatcttggtccgaaaaagagccttgtcgccc
cagcctgctccctatccaacgtgcccctgtccaccaaaggcagaacgtgtcccagactcg
cagaacaacgctgcttcacagcctgctgaaagcaccaccaccaccagcatgcccaccaac
cagtcagtcccctggaccagtggcaagctgagagacaatagcaaagggtttatgaggccc
actatgggtaaagtgccttcctgtcccagacaggagactacccagacaagagactcagca
aaacctttgtctccccagaccaaatcggcctcctattgccgtagcggggacaatggggat
ggcaaaacccagactaagttcacacaccacccccccaacactgtgcctttgcaggatagg
tcatcccaccaccaggatttttcactggatcagacatggaggctccaggacccgcatcag
tttgagagcctgatggcagcagacatggagggtcactcccagaggctgggcttttgtgct
gctgtccatggggctcctggggctcctcataacacatcgacagagaggatcaggaaggtc
aactctgaggtggagtttactgaggctgtgaggaagctgacccagtcacggagcgcgctc
acccctcatcccaggaacgggactgttaatagttttactactggaacaccagggtccaac
gtggatccagtccagattggcaaagcaatgactaatagccctgtcatctctgtcagccac
agccctgctccagccaaaccctctgtaccactctgccttactatgagagaccagcctgtg
tccatggagacctccagtgcctctggcctcgacagtaacaccacaacaaacagcagtagc
acaacagcctccatggcacctctaccccatgcagggataactccaacacagtcctctacc
caggccagtgccacagctatttctgctgcagggataactccaacacagtcctctacccag
gccagtgccacagctatttctactgcagggataactctgacccagtcctatacccaggac
agtgccacagctagttctggtgctagttccatcccagagaacactgagatgggttctgag
tccgcctcagatacttctcagagtcagaggccttctgttacctcggtgaccacccagata
tcagccatacacctgaccaaggagaggagtgtcctgtctctacagggcggctacagcccc
tcccggtcccctcctggcttgggggaggaacaacaggctgagtcacctcagctctccagt
ccacagagtgttgccatgcaggaggatggagacagaggggaagaggactatcctgatgat
gagctggagaatgactgcagtggtgatgatgatgatgaagggtctgactgctcctctttg
aatgatgcctcgtccacagcctccatacccgtcctgccaaatatcacggatgaggagctg
atgagccctgaattagaggatgagggggagctgaagccagctctggtccccagcatgttc
cctctcattccccctacactgtatttcagcactgccaaccagagagtggagcccctgcca
ccagaacagaggaagctgctcaaatggaagatgagcactgtgactcccaacatagtcaaa
cacaccatcgccaggtcacactttaaagtcaccaagagaagtcatgattggcttggctgc
tggggtcaccatatgaagtctcctgggttcaaggccatcagggaataccagaagttaaac
cacttccccggctcgttccagatcggtcgtaaggaccgtctgtggaggaacctgtctaag
atgcaggctcagtttggtaagagggaattcagcttcttccctcgctccttcgttcttcct
caggacatcaagctactgagaaaagcctgggaggacagtggtagcaggcagaaatggatc
atcaagccgcctgcgtctgctcggggtattggaatccaggttattcacaagtggagtcag
atgccatgcaagagaccactcctggttcagaagtacctgcacaagccttacctcatcagt
gggaataagtttgacctgcgtatctatgtgtatgtgacctgttacgacccgctccgcgtt
tacatcttccaggacgggcttgtccgcttcgccagctgcaagtactcgtcgtctatgaaa
agccttggcaacaagttcatgcacctgaccaactacagcgtgaacaagaggaactcagac
tatcagaacaatgacagtgacaaggcctgccagggacacaagtgggctctgaaggcgctg
tggcactacctgggttgtaagggagtcaacaccacgctgatctgggagaagatcaaggac
attgtcatgaaaaccatcattgcctctgacccgtatgtcaacacactggtcaagcttcac
ctgcgttccccctacagctgtcacgagctgtttggctttgacatcatgctggatgagaac
ctcaagccttgggttctggaggtcaacatctcaccaagcctccactccagcacggctctg
gacgtggccattaagggccagatgatcagggacgtgttgaacctggcggggttccttctg
cctcagagagaagaggtgcttccctccgccagcagctctgccagcagtctgtgtggaggg
acacgggagagatccagacctgagatttcaactgatgagaaagtcaagcgggccttctac
ctgagccagcgcttcgcagatcaggtacagtcatgcagccgtctgaagagccaaggaact
actgggaagtttcccagacaggaagtcgacttcttctcctccatcctggacgttctgact
ccagaggacgtacgtgtcctggctgagacggaggacgagctgagcaggaagggggagttt
gaacgagtgttcccctcccactgctcatcacgatacctgcgcttcttcaaacaaccacgc
tacctcaacatcctgctcaaccagtgggagactaagtacggacagaacaggagagaagga
gtctgtgtgctgaggagtctgtgtcagagaggagtccatctaggaaccaccgaccctgca
catctatggtccaagtcgacctacgttcccaagtctgatcaccccaggcaggagccaagc
agatcgagtgtggtggtgagtcacagaaccaggccccagccagaccaggaggagtactgt
ttctcccaggaggtcaccacctccctcctgggctcctccagcctcagcctgaccaccgag
tctacagccagcgtgccacccagagatgaggagttggagggttaa
DBGET
integrated database retrieval system
