Oncorhynchus keta (chum salmon): 118381439
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Entry
118381439 CDS
T09424
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118381439
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
ROBO family
118381439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Toxin_19
VID27_N
Motif
Other DBs
NCBI-GeneID:
118381439
NCBI-ProteinID:
XP_052364011
LinkDB
All DBs
Position
1:complement(14603801..15214939)
Genome browser
AA seq
1726 aa
AA seq
DB search
MAARLMPLLLLLLLQVLSGACMPGEGQGRYTSGWRWKGDRIHTGAATQDGASEGATSAPT
SKHEDDNSLGYTGSRLRQEDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPSPTVEWYKDG
ERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEV
ALLRDDFRQNPADVMVAAGEPAVLECMPPRGHPEPSISWKKDSANIDDRDERITIRGGKL
MITNARKGDAGKYVCVGTNMVGERESEIAELTVLERPSFMKRPGSQVVLVDQSVEFRCEA
RGDPVPTVRWRKEDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCMAENMVGRAEASATL
TVHVPPVFVVRPRNQVVAVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRV
SVSQTGDLTITDAERSDVGYYSCQALNIAGSVITKALLEVTDVVSDRPPPIVRQGPTNQT
VSVDGTVVLSCLATGNPTPTLLWRKDGVLVSTHDSRVKQLDTGALQIRYAKMGDTGIYTC
IASTPSGEASWKAYLEVQEFGVPVLPARPTDPNLIPSAPSKPEVTDVTRTSVTLSWKPNL
TGATPTSYIIEAFSHASGSSWQTLAEHVKTESYVLKGLKASAVYLFLVRAANAYGLSDPS
PITDTVKTQDIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQWTVEQQSQYIQG
YKVMYRTSPEGHQRSDWTVFEVRTPGEDSTVVPQLRKGVTYEFKVRPFFNEFQGTDSEVK
IAKTLEEAPSAAPRGVTVSESGDNGTAIVVSWQPPPEEEQNGVVQEYKIWCLGNESRYHI
NRTVDGSTFSLLIPSLAPGIRYSVEVAASTGAGPGVKSDVTFFQIDSSGRMTEGVLEPEN
TLSQQISEVVKQPAFIAGIGAACWIILMVFSIWLYRQRKKRNGLSTNYAGIRKVPSFTFT
PTVAYQRGGEAVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSMNCCTAGQGNSDS
NLATYSRPADCIANYNNQMESKQTNLMVPEGGVYGDVDLSNKINEMKTFNSPNLKDGRFV
GPGGPGGQPTPYATTQLIQSSILGNNINTDRDRGRGGVGGGEMNEKHGWKPTPVQLQKQQ
EMTSQLHQYNIMEQNKLNKDHYRGGDSPMATTILYNQAHEAHTGGSYNSSDRGSSSTSGS
QGQKKGVRTPKLPKQSAMNWADLLPPPPANPPPFRKMEEYSLSMDESYDPDMQCSLPPSR
MYLQPDELEEEEEEEEEEMERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQDELQPMLQ
DTADSIGSGHERRRHAVSPPPRPLSPSHTYGYISSPMSLDTDGMEEEGEMLEEEEEEEEG
DETDAEVAKVHHHHTHPHHPHHPHHPQQMHPRRLLLRGLEQTPASSMGDLESSVTGSMIN
GWGSASEEDNASSGRSSAVSSSDGSFFTDADFAQAVASAAEYAGLKVAKYTNPTQGQEEG
PGGRKYQMTPSGHRPGSPLSTDSNMSTANMQKRPPKKQKQHPAAGHPGLQRREAYPEDLP
PPPIPPPAGLKSPTHPSKTALETRGVMSPKAGEGRDRRGGSGGGYRQREGSDPRTSSSER
RETQDRQKNPRTGKGNKQEGGSTKARQHPGPEDILPYSRPSFPTVHSPRDIDPRSPSSMS
SRGSGGRRRGEGGAGARRNPNDMGLNTLGAFQPGDDDLEVQHLPTG
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaggctgatgcccctgctgctgctgctgctgctgcaggtgctgagtggagca
tgtatgccaggggaaggacaggggaggtacacgagtggctggaggtggaaaggtgacagg
atccacacgggcgctgccactcaggacggggccagtgaaggggccacctcggcccccacc
tcaaaacacgaggatgacaactccctgggctacacaggatcccgtctgcgtcaggaggac
tccccaccccggattgtggagcacccctctgacttgatcgtgtccaaaggggagccggcc
accctcaactgcaaggcagaggggcggcccagccccacggtggagtggtacaaggacggg
gagcgggtggaaacggaccgggacaaccctcgatctcaacgcatgctgctgcccagcggc
tccctcttcttcctacggatcgtccacggacgacgctccaaaccggatgagggctcctac
gtctgcgtcgcccgcaactacctgggagaagccgtcagtcacaacgcctcgctggaagta
gcattactacgtgatgacttcagacagaatcctgcagatgtgatggtggcagcgggcgag
cctgcagtcctagagtgtatgccccctcgcgggcatcctgaacctagcatatcctggaag
aaggacagtgccaacatcgatgacagagatgaacgaatcactatccggggaggaaagctg
atgataaccaatgccagaaaaggcgacgcagggaagtatgtgtgtgtcgggaccaatatg
gtgggagagagggagagtgagatcgctgagctcactgtgctcgagagacccagctttatg
aagcgtcccggcagccaggtggtgctggtggaccagagcgtggagttcaggtgtgaggcc
cggggtgacccagttcccaccgtccgctggaggaaagaggacggagacctgcccaaggga
agatatgagatccgtgaggaccacaccctgaagatccgtcgtctgacctctgcagacgtg
ggttcttacacctgcatggcagagaacatggtgggcagggcggaggcgtcggccaccctc
accgtccacgtgccccctgtgtttgtggtgcggcccaggaaccaggtggtggcggtgggg
aggaccgtcaccttccagtgtgaggcaacaggaaaccctcaacctgctatcttctggcag
agagagggcagccagaacctgctgttctcctaccagcccccccagccctctagccgcgtc
tctgtctcccagacgggggaccttactatcacagatgcagagcgctcagacgtgggctac
tacagctgccaggccctcaacatcgctggctctgtcatcaccaaggccctgctggaggtc
actgacgttgtgtcggatcgcccacctccaattgtccgccagggtccaaccaatcagaca
gtgtctgtggacgggacggtggtcctgagttgcctagcaacgggtaaccccacccccacc
ctcctgtggaggaaggacggtgtgttggtgtccactcatgactcccgggtcaaacagctg
gacacgggcgcactgcagatccgctacgccaagatgggtgacacaggcatctacacatgc
atcgcctccactcccagtggcgaggcctcgtggaaagcctacctggaggttcaagagttt
ggtgttccagtgctgccggccagacccactgaccccaacctgatccccagtgccccctcc
aaacctgaggtcactgacgtcacccgcacctctgtcaccctgtcttggaagcccaacctc
acaggagccacacccacctcctacatcatagaggccttcagtcatgcgtcaggcagcagc
tggcagaccctggcagaacatgtgaagactgagtcgtatgtactgaagggcctgaaggcc
agtgctgtctatctcttcctggtccgagctgctaacgcctacggcctgagtgaccccagc
cccattactgacaccgtcaaaacacaagatatcccccccaccagtcagggagtggaccac
cgtcagatccagagggagttaggagaggtggtcatccaccttcacaaccccaccatcctc
tcctcctcctctgtcagagtgcagtggacggtggagcagcagtctcagtacatccagggt
tataaggtgatgtaccgaacctctccagaggggcatcagaggagtgactggactgtgttt
gaggtgagaaccccaggggaggacagtactgtggtaccccagctcaggaagggagtcacc
tacgagttcaaagttcgccccttcttcaacgagttccagggaacagacagtgaggtcaag
atagccaagactctggaggaagctcccagtgcagcccctcgtggggttaccgtctcagag
agcggggacaatgggaccgccattgtggtgtcctggcaaccgcctccagaggaggagcag
aatggggtggtccaggagtacaagatctggtgtttggggaatgagagcagataccatatc
aaccgtacggtggacggctctaccttctccttgctgatccccagcctggctccagggatc
cgttacagtgtggaggtcgcagccagcactggggcaggcccaggggtcaagtctgatgtc
accttcttccagatagactcatcggggcgtatgacggagggtgtgttggagccagagaac
accctgtcccagcagatcagcgaggtggtgaagcagccggccttcatagcagggatagga
gcggcctgttggatcatcctcatggtgttcagtatctggctctaccgacagcgtaagaag
aggaatggcctcagcactaactacgcaggcatccgcaaggtgccatcctttaccttcact
cctacagtggcgtaccagagagggggagaggctgtcagcagtgctggaaggccaggtttg
ctgaacattggggagtctgctacccagccctggttggctgatacctggcccaactcctgc
tccaatcacaatgactgtagcatgaactgctgcaccgcaggacagggcaacagtgacagc
aatctggctacatacagccgcccagccgactgcatcgccaactataacaaccagatggag
agcaaacagaccaacctgatggtgccggagggaggagtgtacggagacgtggacctctcc
aacaagatcaatgagatgaagaccttcaacagccccaacctgaaggacggacgcttcgtt
gggccgggtggaccagggggacagcccaccccgtacgccaccacacagctcatccagtcg
tctatcctgggcaacaacatcaacacagacagagacagagggagaggaggagtaggggga
ggggagatgaacgagaaacatggctggaaacccaccccggttcagctgcagaagcaacag
gaaatgacctcacagctccaccagtataacatcatggagcagaacaagctaaacaaggac
cactatagaggaggggacagtcccatggctaccaccatcctctataaccaggcccacgag
gcccacacagggggatcctacaacagctctgaccggggcagcagcagcacctctgggagt
caaggtcaaaagaagggagtgcgcacccccaaactacccaaacagagtgcaatgaactgg
gctgaccttctgcctcctccccctgctaacccacctcccttccgcaaaatggaggagtac
tccctgtctatggacgagagctatgacccagacatgcagtgctccctgcccccctcccgc
atgtacctgcagccagacgaactggaggaggaggaagaggaggaggaggaggagatggag
aggggtcccactccacctgtcagaggggctgcctcgtcccccgccgcggtgtcctacagc
caccagtccacagccaccctcaccccctcgccccaggatgagctacaacccatgctccaa
gacactgcagacagcattggctctggacacgagcgcagacgccatgcagtgagcccccct
ccccgacccctctccccctcacacacctacggctacatctccagccccatgtccctggac
acagacggcatggaggaagagggggagatgttggaggaagaggaggaggaggaggaaggg
gacgagacagacgcggaggtggctaaggtgcaccaccaccacacccaccctcaccacccc
caccacccccaccacccccagcagatgcaccccaggaggctgctgctgcggggtctggag
cagaccccagcctccagcatgggggacctggagagctctgtgacgggatccatgatcaac
ggctggggttcggcatccgaggaggataatgcctcgtcagggcgctccagcgctgtcagc
tcctcagacggatccttcttcacagatgccgactttgcccaggcagtcgcgtctgctgca
gagtacgcaggcctgaaggtggccaagtacaccaaccccacgcaaggccaggaggaaggc
cccggaggacgaaagtatcaaatgaccccttcaggccaccgtcctggcagccccctgtcc
acagacagcaacatgagcacggccaacatgcagaagaggcctcctaagaagcagaaacag
caccctgcagcgggccacccagggcttcagcgacgagaggcctaccctgaagatctgccc
ccccctcccatcccccctccagcggggctcaagtcccccacacacccctccaagacagcc
ctggagacccggggggtgatgtcccccaaggcaggcgagggcagggacaggagagggggc
tcaggaggagggtaccggcaacgggagggatcggacccccgtaccagctcctctgagcgc
cgggagacccaggacagacagaaaaaccctcgcacagggaaagggaacaaacaggagggg
ggcagcaccaaggcacgccaacacccagggccagaggacatcctgccctacagccgcccc
tccttccccacggtccacagtccccgagacattgaccccagatcccccagctctatgtcc
tcccggggctcgggggggcggcggagaggagaggggggggcaggggcccgcaggaacccc
aacgacatgggcctcaacaccttgggagccttccagccaggagacgatgacttagaggta
caacacttgccgactggctaa
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integrated database retrieval system
