Oncorhynchus keta (chum salmon): 118381489
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Entry
118381489 CDS
T09424
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118381489
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
118381489
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
118381489
NCBI-ProteinID:
XP_035624327
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Position
4:complement(73581438..73583555)
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AA seq
380 aa
AA seq
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MSAFVLNMEERERRGDKQQKCPESEKKERESTSACASDATEHTAEEEDDIAAKLDVTSDK
FDPLLALYSTTVPLPYPNVKCFNNIAEYESFLKGGRGRAKPENVEKKQRKARKGVADPER
IEKLKRLMVNNPIVGEDGEEGTSGTARRCRIQKAAKNVLTRMPLHTGSPLGEMHRCVQER
IRVKVHIRTFKGLRGVCSGFIVAFDKFWNMAMVDVDETYREPLLGEALYHEKALTVTRLF
DKLKLQESAALREYEEKKKQIDKKKAEPFHPPPETQTRDCRRGDPNRGDPRRRGDPRAVD
PRLARATVGPPVGDDPGALGATGKTHGSNVKGQESGTEGPKRRGSQKKEVSQPYGRVHTR
HVNQLFIRGENVLLVNLQPL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttgttttgaacatggaggagagggaaagaagaggagataaacaacaaaaa
tgtccagaatcagaaaagaaagagagagaatcaacaagtgcatgtgcttcagatgcaacc
gaacatacggcagaagaagaagatgatatcgcggcaaagttggacgtcacctccgataaa
tttgatccactcctggcgctatactcgactacagtgcctcttccatatccaaacgtgaaa
tgcttcaacaacatagccgagtatgagagctttctaaaggggggacggggccgcgccaag
cctgagaacgtggagaaaaaacagaggaaagccaggaaaggtgtagcagatcctgagagg
atagagaaactgaagaggttgatggtgaacaacccgatagtgggagaagatggagaggag
gggaccagcggcactgcccgccgttgtagaatacagaaggctgccaagaatgtcctgacc
aggatgcctctccatacaggaagtcctctgggggagatgcaccgctgcgtgcaggagagg
atcagagtgaaagttcacatcagaaccttcaaggggctccgtggagtgtgttctggcttc
atagtggccttcgacaagttctggaacatggcaatggtagatgtagatgagacctacagg
gaacctctgctgggtgaagctctctaccatgagaaggccctcactgtcacacggctcttt
gacaagctgaaactccaggagagtgcggcgctgagagaatatgaggagaagaagaagcag
atagacaagaagaaagctgaacccttccatcccccgcctgagacccaaaccagagactgc
agacgaggtgaccccaatagaggggaccccagaaggagaggagaccctagggcagtggat
ccccgacttgcaagggccacagttgggcccccagtgggcgatgaccccggagccctaggg
gccacaggtaagacccatgggtcaaatgttaaaggtcaggagtcagggactgaggggccg
aagagaagagggtcccagaagaaagaagtgtcccagccctacgggagggttcatacgcgc
cacgtcaaccagctcttcatacggggagagaacgtgcttctagtcaacctacaaccactc
tga
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