Oncorhynchus keta (chum salmon): 118381510
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Entry
118381510 CDS
T09424
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118381510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118381510
Membrane trafficking [BR:
oke04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
118381510
Endosome - Golgi transport
Arf GTPase associated proteins
118381510
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
118381510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
PH_11
SAM_2
PH_3
PH_6
RA
PH_8
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
118381510
NCBI-ProteinID:
XP_052324855
LinkDB
All DBs
Position
18:40027752..40177372
Genome browser
AA seq
1653 aa
AA seq
DB search
MSEADGCVSVWDWLCVLHLDQYFPVFQDAGFGTLLECQGLTQDQLETIGITLPGHRKRIL
ASLQKTLHTNTHTHPESEPDTLHTHLAAEGDQREEERAVFTDRPSPVGSERPVPAQRPVS
RGERPVPAQRPVSRGERPVPAQRLVPKERSVSREGERDGERPVPAQRPVPKERTKYRSVP
VETLDCVQTYPHPNTSPCPTTPHSSAQDSPLPPIPPRSTPNCPPLRFIPTSPKNSPTAPK
PRSEHNNLNTPITVPPPSLATNPLTLPSPRPCPAPLAIYPPARHSQQVWKGGRKPSPGSP
SSSSSSSSFERYDQSSSDQGVPPLPPKVYVVGAGPKEPHSPAPIPHRPPVLPSRTTPTQS
DAPVDEPHTDRTPPPRTEVPNTPVDTQPALPMRRIPQPRPEIRSGDSSDDYEDPDQVFPK
PQAVNMAEDPDQIYSKLQSVNMADRDVFLPVPGWGKGRYNSLCSDDELLDDDNEPISSHR
SSWQDYGLSTLQGSVYLPVRGRVLAPPPRDGPSPEPCPVLKIGWLDKNPTQGSLYYQRRW
VKLDVDYLRYFDNDKEVYSKRIIPTAAITGVTNVGEQKFEVVTANRTFLFKAESDSERNE
WVAVLQNFTRGRQEGSREMTSLVPPSFLTPGSPLTPEQQGYLELRGLRSKLYTVVSGDKV
FLYKNMEDYRLGIGITSIDMNVGNVKVTDRRSFDLTTPYRIFSFLADSEQHKEQWVEAMR
DAIGDALSNSEVANQIWAEPSNCCCADCGAAKPEWAAINLCVVVCKCCAGEHRGLGPSIS
KVRSLKMDRKVWTEELIQVFLLLGNERLNRFWAANIPPSEALSPTSCSKARRRFISSKYR
QGKYRKYHPLYGNQRELNNALCINVQCSDVLETLCLVFCGADVNCSTGQTDCPSPLSLAL
AHNQKLQAQFLSHNLNTELPRSEVTGDMEPQHYSPQHPVTHNGFLFKTASMVRPITERKA
REEFSRRWCMLNDGNFSYYESDKTSTPNGALKSTEIVCLSVNTPERHGYDHTFELYSDSE
RLYLFGTDDQDSHKEWVKSITKMFIPSNAEALLRLSFERIGRLKYKDGLNLQSPRVGWFA
LVGSSLHAYLEDSEEEEEIHLRKLQELSIQQENEVLVLVERGRTLYIEGERKLDFQGWCV
GIQKAAGSAGDSLSQQQLTEADIPVIVDRCIDYITQCGLTSEGIYRKSGVNSRVAALCEA
FRRDARNVRLKEEEHQVDDVSNTLKRFFRESGEGLFTKHASAWLSTPVIPEESKKISQYQ
LLLSRLPRVNKATLRALVNHLYCVQRFAELNQMNLHNLAIVFGPTLFQSDGKDFTAGRVV
EELIEHYTDVFEVDEQQLKRQLDEITVIIKVREKLNLNSSVPASGSAGDFICTVYLEEKK
ETAEQHVKIPGSMTAAELTCEILDRRKIQVREKDYWSCWEVSQKEETGEWTERKTTGAAG
RSARRRRLVSGQRERLLELLGGQPEGGDWFGTIRPPIASKVDVSKHGMVKFREERSILGL
GLNTGSFHDRYFILNTVSLRMYKEVRSNRSEREWQVKNLRVYLGIKKKLRPPTCWGLTVI
YKSEKQEKPEKQQWYLCCDTQTEMREWFSTFLTVQYDGNVWPADAVQTRVTRALPVDTRH
GNVALIPLRGSENEMRNSVAAFTADPLGLFRDV
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggacgggtgtgtgtcggtgtgggactggctgtgtgtgctgcatctggac
cagtatttcccagtgttccaggacgcggggtttggaacgttgttggaatgccaagggctg
acccaggatcagctggagacgattggaatcacattgcctggacaccgcaaacgcatccta
gccagcctgcaaaaaacactccacacaaacactcacacacacccagagagtgagcccgac
actctacacacacacctggctgcagagggagaccagagagaggaagagagagcagtgttc
acagacagacccagccctgtgggaagtgagagaccagtccctgcacagagaccagtgtcc
agaggagagagaccagtccctgcacagagaccagtgtccagaggagagagaccagtccct
gcacagagactagtccctaaggagagatcagtgtccagggaaggagagagggatggagag
agaccagtccctgcacagagaccagtccctaaggagagaactaagtaccgctctgtccct
gtggagacattggactgtgtccagacttaccctcatcccaacactagcccctgccctacc
accccccattctagtgcccaggactcccctttaccccccatcccacctcgcagcactcca
aactgccccccactacgcttcatccccacctcccctaagaactcccccacggcacccaaa
cccagatctgaacataacaacttaaacaccccaatcactgtacctcctcctagccttgcc
accaatcccctcaccttaccctcccccaggccctgtcctgcacctctggctatctaccca
ccagccagacactcccagcaggtgtggaagggaggaagaaagccctcccctggttccccc
tcatcctcatcctcttcctcctcatttgaacgatatgaccagtcatcatctgatcaaggc
gtgcctcccctcccccctaaagtctatgtggtgggggcgggccctaaagagcctcatagt
cctgctccaatcccacatcgacctcctgtcttgccctccagaaccacacccacacagagt
gatgctcccgtcgatgagccgcacacggaccgaactcccccgcctcggaccgaggtaccc
aatacaccagtcgacacgcagcctgctctgcccatgagaaggatcccccagccacggcct
gaaatcaggtcaggtgacagttcagatgactatgaagatccagaccaagtcttccccaag
ccccaggctgtgaacatggcagaagatccagaccaaatctactccaagctccagtctgtg
aacatggcagacagagatgtgttcctgccagtgccggggtgggggaagggacggtacaac
tctctctgcagcgacgatgaactattggatgatgacaatgagccaatcagcagccatcgg
agctcatggcaggactatggtctgagtacgctccagggtagtgtctacctgccggtcaga
ggcagggtccttgccccgccccctagagatggcccctcccctgaaccctgccctgttcta
aagattggttggctggataagaacccaacccaggggtctctgtactaccagaggagatgg
gtgaagctggatgttgactacctgagatactttgacaacgacaaggaggtatactctaag
aggatcataccaacggctgccattacgggggtgaccaacgtgggggagcagaagtttgag
gtggtcacagccaaccgaacctttctcttcaaagccgagagcgactctgagaggaatgag
tgggtggcagtgctgcagaacttcactagggggcgccaggaaggcagcagggagatgacc
tcattggtcccgccctcctttctgacccctggttcacccctgacccctgaacagcagggc
tacctggagctgaggggcctgcgctctaaactctacacagtcgtctccggagacaaggtc
ttcctctacaagaacatggaggactaccgccttggcatcggtatcacgtctatcgacatg
aatgtaggaaacgtgaaagtcactgaccgccgcagttttgatttgaccacaccctaccgc
atcttcagttttctagcagattcggaacaacataaggagcagtgggtagaagcaatgcgt
gacgcaattggagatgccctgtccaatagcgaggtggctaatcaaatctgggcggagcct
agcaactgttgctgtgccgactgtggcgccgccaaacctgagtgggctgccatcaacctg
tgtgtggtggtctgcaaatgctgtgcaggagagcatcggggtttgggccccagcatctct
aaggtgcgcagtctgaagatggacaggaaggtgtggacagaggagcttatacaggtgttc
ctgttgctaggaaacgagcgtctgaacaggttctgggcggcgaacatccctcccagcgag
gcgctgagtccgaccagctgcagcaaagcccgccgacgattcatcagctctaaatacaga
cagggcaaataccgcaaatatcaccccctctacggcaaccagagagagctcaacaatgcc
ctgtgtataaacgtgcagtgcagtgatgtgctggaaacgttgtgtctggtgttctgtgga
gctgatgtgaactgttctactggccagactgactgtccctcccccctctccctggcactc
gcacacaaccagaaactacaggcccagttcctctctcacaacctcaacacagagctgcct
cgttcggaggtgactggggacatggagcctcaacactattcaccacagcacccagtcact
cacaatggcttccttttcaagaccgcctccatggtccggcctattacggagcgcaaggcc
agggaggagttcagtcgtcgctggtgtatgttaaatgatgggaactttagttactatgag
agtgacaagacctcaacgcccaacggtgccctgaagtctacagagatagtctgtctgtct
gtcaacacaccagagagacatggctatgaccatacgtttgagctgtactctgactcagag
cgtctctatctgtttggaactgacgaccaagacagccacaaggagtgggtcaaatccatc
accaagatgtttattccatccaatgcagaggctctgttgagactgagctttgagcggatt
ggccggctgaagtacaaggacgggttgaacctacagagccctcgtgttggctggtttgcg
ctggttggctcctccctccatgcctacctggaggacagtgaggaagaggaggagatacac
ctacgcaaattacaggagctctcgatccagcaggagaatgaggtgctggttctggtggag
agaggcaggacactgtacatcgagggggagaggaagcttgacttccagggttggtgtgtg
ggcatccagaaagcagcaggcagtgcaggagactctcttagtcagcagcaactaactgag
gccgacatccctgttatagtggaccgctgcattgactatatcacacagtgcggtctgacg
tctgagggtatctaccgtaagagcggtgtgaacagtcgcgtggcggcgctgtgcgaggcg
tttcggcgtgatgcccgtaatgtgcgtctgaaggaggaggagcaccaggtggacgacgtg
tctaacacactgaaacgcttcttcagagagtctggagagggcctgttcaccaaacatgct
agtgcatggctcagcacacctgtgatcccagaggagagcaagaagatctctcagtaccag
ctgctgctgagccgcctgcccagagtcaacaaggccacgctacgagccctggtcaaccac
ctctactgtgtgcagcggtttgcagagctgaaccagatgaatctccataacctggctata
gtatttggcccaacactgttccagagcgacgggaaggacttcacagctggccgcgtcgta
gaggaactcatagagcactacacggacgtctttgaggtggatgagcagcagctgaaaagg
cagctggatgagatcacggtcatcattaaagttagagagaagttgaacctcaactccagt
gttcctgcgtcggggtcagcaggtgacttcatctgtacagtgtacctggaggagaagaag
gagacggcagagcagcatgtcaagatccctggttctatgacggcagcagagctgacctgt
gagattctggaccggcggaagatccaggtcagagagaaagactactggagctgctgggag
gtcagccagaaggaggagactggtgagtggacagagagaaagactactggagctgctggg
aggtcagccagaaggaggagactggtgagtggacagagagaaagactactggagctgctg
ggaggtcagccagaaggaggagactggtttggtacgatccgtccccccatagccagtaaa
gtggatgtgtccaagcacgggatggtgaagttccgggaggagaggagcattctgggattg
ggactgaacaccggcagcttccacgaccgctacttcatcctaaacactgtctccctcagg
atgtacaaggaagtgcggagtaatcgttcagagagggaatggcaggtgaagaatctgagg
gtctatctaggcatcaagaagaaactacgaccacccacctgttggggtctgaccgtgatc
tataaaagtgaaaaacaggagaaaccagagaagcagcaatggtatctgtgttgtgacact
cagacagagatgagggagtggttctccaccttcctcactgtccagtatgatggtaacgtg
tggccagcggatgcagtacaaacacgtgtgacccgtgcgttgccggtggatacacgtcat
ggtaacgtggcattgattccgttgcgcggcagcgagaatgagatgcggaacagcgttgca
gctttcaccgccgacccgcttggcctctttagagatgtctga
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