Oncorhynchus keta (chum salmon): 118381607
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Entry
118381607 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oke04054
]
118381607
Pattern recognition receptors [BR:
oke04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118381607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
NOD2_WH
LRR_6
PRY
SPRY
zf-C3HC4_4
zf-C3HC4
LRR_4
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
Prok-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
118381607
NCBI-ProteinID:
XP_052370421
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MEKRGQCSKMSLSGELDTEANSGWSPLSEDQSRCAVCEQVLTDPVSITCGHRFCRRCITR
HWEQSAPSGHYDCPRCRKRSRTRPVLLQRAEPNDEARGSENMDVSLQRAIVNHKDSLKRR
YECVIEGLVNAGSQTPLNRIYTELYITEGESEGVSDEHEVWQLETACRTPTSRDTAIHCN
DLFKPLAGQERSIRTVLTKGIAGIGKTVSVQTFVLDWAEGKANQDVEIIFVLPFRELNLI
KDRQYSLLRLLHAFHPELDIVNAETLAACKATFIFDGLDESRIPLDFQCNKMMSDVTRTS
SVDVLLTNLIKGNLLPSALLWITSRPAATNQIPSECVDQVTEVRGFNDRQKEEYFRKRFR
DDDDEDLANRIISHIKTSRSLHVMCHVPVFCWISATVLEHMSRTDERREMPKTLTEMFTH
FVLIHTSPKNQKCHGKDQMDQQELLESDKEALLKLGKLAFEHLEKGNLVFYEEDLKECGI
DVTEASVYSGVCTQVFKEESVLFQRVVYCFVHLSVQEFLSAVYVYHCYTTKNMDELKPFL
QATRVTSEEITLHELLKSTANKALESKTGHLDLVVRFLHGMSLAANQKLLRGLVTQTESS
PESVKKTIRSLKTMQNTNMSPERCINLFHCLIEMKTHSVQQEIEKYLRSEKRSKNLPLTY
CSALAYMLQISDEVLEAFDLKKYKTSQEGRRRLLPAVRVCRKALLADCQLIEASCELLVS
SLSSNPSNLRELDMSNNDLLDSGVKLXSAGLGDSPCKLETLSLSGCKLTEASCEVLASAL
SSSSHLRELDLSNNDLLDSGVKLLLAGRRDSPCKLETLRLAFCEVTEEGCASLASALKSN
PSHLRELDLSYNHPGDSGVRLLSAGLEDPHCRLEKLNVEHGGQYTIKHGLRKYGCVLSLD
PNTASRNLSLSEENRTVTWRTEEQPYADHLERFQDFDQVLCTEGLSGRCYWEVEWSGRGA
HIGVTYKGINRSGRGDDSGLGPSDKTWCLVCCDDHYMAWINSKLTTIPSPSSSPPSNRVG
LYLDWPAGTMSFYKVCSDTLTHLHTFYTTFTEPLYPGLFVWCHSSVSLCQVVAPVSETQR
HVSL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaggggtcagtgctctaaaatgagtctctcgggggaacttgacacggaagct
aacagtggatggtctcctctgtcagaggatcagtccaggtgtgcagtgtgtgagcaggtg
ctgacagatccagtctctatcacctgtggacaccggttctgcagacggtgcatcaccaga
cactgggagcagtctgctccgtcaggacactacgactgtcctcggtgtagaaagaggtcc
aggacacgtccagttctactgcaacgggctgaacccaacgatgaagcgagaggctctgaa
aacatggatgtcagcctgcagagagctatagtaaaccataaagacagtctgaagagaagg
tatgaatgtgtgatagaaggcctggtaaatgcagggagtcaaacccccctcaacaggatt
tacacagagctgtacatcacagagggagagagtgaaggggttagcgatgaacatgaggtg
tggcagctagagacggcatgcaggacaccgacctcacgtgacacggcaatccactgcaat
gacctcttcaaacccttagctggccaggagagaagcatcagaactgtgctgaccaagggc
atcgctggcatcggaaaaacagtctctgtgcagacgttcgtcctcgactgggctgaaggg
aaggcaaaccaagatgtggagatcatatttgtgcttcctttccgggagctgaacttgatc
aaagatcgccagtacagtcttctgagacttctccatgccttccacccagaactcgatata
gtcaatgcagagacactcgctgcctgtaaagctacgttcatctttgacgggttggatgaa
agcagaattccattggattttcagtgcaacaaaatgatgtctgatgtcacacggacatcg
tctgtagatgttctgctgacaaacctcatcaaggggaatctgcttccctcggctctcctc
tggataacctcccgaccagcagcaaccaatcagatcccctctgagtgtgtcgaccaggtg
acagaggtacgagggttcaacgaccgacagaaggaggagtacttcaggaaaagattccgt
gatgatgatgatgaggacctggccaacagaatcatctcccacattaagacatcaaggagc
ctccacgtcatgtgtcacgtgccagttttctgttggatttctgcaacagtccttgaacac
atgtcgaggacagacgagagacgagagatgcccaagactctgactgagatgttcacacac
ttcgtgctcattcacaccagcccgaagaaccagaagtgtcatggaaaagaccaaatggac
caacaggagctcctggagtctgataaggaagctcttctgaagctggggaagctggcgttt
gaacatctggagaagggtaatctcgtgttctatgaagaagatctgaaagagtgtggcatt
gatgtcacagaagcctcggtgtactctggcgtgtgcacacaagtctttaaagaagagtct
gtgttgtttcagagagtggtgtactgctttgttcatctgagcgttcaggagtttctctcc
gctgtctacgtgtaccattgttacacaaccaagaacatggatgaactgaagcccttcctc
caggcgactagagtcacgtctgaagagataaccttacatgagctgctgaagagtaccgcg
aataaagccttggagagtaagactggacatctggaccttgtcgtccgcttccttcacggc
atgtcactggcagccaatcagaaactcctacgaggtctggtgacacagacggaaagcagt
ccagagagcgtcaagaaaacgatccgatccctgaagacgatgcagaataccaacatgtcc
cccgagaggtgcatcaatctcttccactgtctgatagagatgaaaacccattcagtacag
caggaaatcgaaaaatacttgaggtcagagaaaagatccaaaaacctgccacttacgtac
tgttcagcgttggcctacatgctgcagatatcagacgaggttctggaggcgtttgacctg
aagaaatacaagacctcccaggagggtcgtaggagactgctgccagctgtgagagtctgc
aggaaggctctacttgctgactgtcaactcatagaagcatcgtgtgaactgttagtctcc
tctctcagctcaaacccctcaaacctgagagagctggacatgagtaacaatgacctgctg
gattcaggagtgaagctgnggtctgctggactgggggattcaccatgtaaactggagact
ctgagtctctctggctgtaaactcacagaagcatcctgtgaagtgttggcctcagctctc
agttcctcctcacacctgagagagctggatctgagtaacaatgacctgctggattcagga
gtgaagctgctcttagctggacggagagattcaccatgtaaactggagactctgaggttg
gcattctgtgaagtcacagaggaaggctgtgcttctctggcctcagctctgaagtcaaac
ccttcacacctgagagagctggatctgagttacaatcacccaggagactcgggagtcaga
ctgctctctgctggactggaggatccacactgcagactggagaaactcaatgtggaacat
ggaggacagtacacaattaaacacgggcttagaaaatatggctgtgtgctctcgctggac
ccgaacacagcaagcagaaacctctctctgtctgaggagaacagaacggtgacatggagg
acagaggagcagccgtatgctgatcacctggagagatttcaggatttcgaccaggtgctg
tgtacagagggtctgtcagggcgctgttactgggaggtagagtggagtgggagaggagct
catatcggtgtgacgtataaaggaatcaataggtcaggaaggggtgatgacagtgggctt
ggacctagtgacaaaacctggtgtctggtctgttgtgatgaccattacatggcctggatc
aatagtaaactcactaccataccttccccctcctcctcccccccgtccaacagagtagga
ctgtatctggactggccggccggcacgatgtctttctacaaggtctgttctgatacactg
actcacctgcacacgttctacaccacatttaccgagcccctctacccagggctgtttgtt
tggtgtcactcctcagtgtccctgtgtcaggtggtggcccctgtgtcagaaacacaacgt
catgtttccctctaa
DBGET
integrated database retrieval system
