Oncorhynchus keta (chum salmon): 118381731
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Entry
118381731 CDS
T09424
Symbol
coil
Name
(RefSeq) LOW QUALITY PROTEIN: coilin
KO
K13150
coilin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118381731 (coil)
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
118381731 (coil)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coilin_N
Tudor_Coilin
Motif
Other DBs
NCBI-GeneID:
118381731
NCBI-ProteinID:
XP_052369329
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Position
Unknown
AA seq
622 aa
AA seq
DB search
MAASNTNVIRVRLYFDYPPPSVSDCRMCWVLVDLNKCRVVADIASVIREKFDFSRRSILS
LFIEDCYLPHTESIYVVRDNDSIRVKVDXPNPFNGSHSNTSVVKSKKRRRAAEEEEPTQN
RVSEEWKKKKKKRKESQEADSNQAVVEERRKEDKKKQKKKKKDKKVATKTTASSTGPSPT
SSTGPSPTSSTGPSPTVVKADKNTKKAPSAKAVSVNGKATAKTPNGESDDSSDSSESSSE
EEAPSTIPMQKLPSKSHSASSTPPVTSKATPVVKPRVPIKKPRPPPSSSDSDSSDSSGDD
ASSKATTDKPPVKNQTPLSKPAATPPTTIPTGSGAGPRDKTTPSRPSLPSSGPRTSVSPG
QRANAPGPGSTPAVQKAHRRPESPGSSSSSSSSEEEIQLVIKQPGLGMGIVPAMAAQPTW
RGRGSPRGAERGGGRGQSWVGGGRGVRGDWDRGVLGGRGGRGEDSGAGGGDNAGFYFNYE
GGQRQQTPQPPSYQKDSLINSSVVFQNPSESVPKRDYSEMPLLAAPPQDGQKIAFKLLEL
TENYTPEVSEYKEGKIIHFDHSTKQIELELLSAYQAPVEPGKFDLVYQNADGSESVEYAV
SRGSRVTERWDSLLEPRLVVGN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccaataccaatgtgatacgggtgcgattgtattttgattacccgccgccc
tcggtatccgactgtcgcatgtgctgggtcctcgtcgatctgaacaaatgccgcgtggta
gcagacatagccagcgtgatcagggaaaagttcgacttcagtcgcaggagcattttgagt
ctgttcatcgaagactgctacctgccgcacacagagagcatctacgtcgtccgagataac
gacagcatcagagtgaaggtggacnaccctaaccctttcaatggaagtcattcgaacaca
tctgttgtgaagtccaagaagaggaggagagctgccgaggaggaggagcccacacagaac
cgagtgagtgaagagtggaagaagaagaagaagaagagaaaggagagtcaggaggccgat
tccaaccaggctgtagttgaagagaggaggaaagaagacaagaagaaacagaagaagaaa
aagaaagataagaaggtggcgaccaaaaccactgcctcgtccacaggaccctctcccacc
tcgtccacaggaccctctcccacctcgtccacaggaccctctcccaccgtagtcaaagcg
gacaaaaacaccaagaaggctccatcggccaaagcagtatctgttaacggtaaagccaca
gcaaagaccccgaatggggaatcggacgactcttctgattccagtgaaagcagtagtgag
gaggaggccccgagtacaatccccatgcagaaactaccctccaaatcacactctgctagc
tctacaccccctgtcacatctaaagccacccctgtagttaaaccccgagtccccattaag
aaaccacgcccacctccctcatcatctgattcggactcctcagactcatcgggtgacgat
gcctctagcaaagccaccacagacaaacctcccgttaaaaaccaaactcctctgtccaaa
cctgctgccactcctcctaccaccatacccaccggctccggagctggtcctagagacaaa
accaccccctccaggcccagcctcccttcctcaggtcccaggacctctgtatcccctggc
cagagagctaatgctccagggccaggctctaccccagcagtgcagaaggcccacaggagg
cctgagagcccaggctctagtagtagtagtagtagtagtgaggaggagatccagctggtt
atcaaacaaccgggcctggggatggggatagtccctgctatggcagcacaacccacctgg
agaggcaggggaagccctaggggtgcggagagaggtgggggtagaggccagagttgggtt
ggtggaggtaggggtgttagaggggactgggacaggggggttctcgggggtagaggaggg
agaggggaagatagcggggcagggggaggagataatgcagggttttatttcaactatgaa
ggtggacagcgacagcagactcctcagccaccatcgtaccagaaggactccctgattaac
agctctgtggtgttccagaacccatcagagagtgtccccaagagggactacagtgagatg
cccctcctagctgctccccctcaggacggacagaagatcgccttcaagctgctggagctg
acagagaactacacaccagaggtgtctgagtataaagaggggaaaatcattcattttgac
cacagcaccaaacagattgagctcgaactgctctctgcttatcaagcgccggtggagccg
gggaagtttgacctggtgtatcagaatgcggacggatccgagagtgtggagtacgctgtg
tcccggggctccagggtgactgaacgttgggactcactgctggaacccaggctagttgtt
gggaattag
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