Oncorhynchus keta (chum salmon): 118381797
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Entry
118381797 CDS
T09424
Name
(RefSeq) glial fibrillary acidic protein-like
KO
K05640
glial fibrillary acidic protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118381797
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118381797
Membrane trafficking [BR:
oke04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118381797
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
118381797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Myosin_tail_1
TPR_MLP1_2
GAS
DUF7491
DUF1664
TolA_bind_tri
DUF4515
CENP-F_leu_zip
Fib_alpha
BLOC1_2
YwqH-like
NET2A
DUF4200
T2SSF
VPS11_C
Motif
Other DBs
NCBI-GeneID:
118381797
NCBI-ProteinID:
XP_052347505
LinkDB
All DBs
Position
32:complement(33701179..33708202)
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AA seq
457 aa
AA seq
DB search
MESQRVLSSYRKRFGPQGAGSVGGGVRLSSLSSSRFSLHGTPRHLTHSSTISRLSLGSAG
GALLLGTPGNRLDFSADSLLKAQYRETRTNEKVEMMGLNDRFASFIEKVRFLEQQNTVLV
TELTQLRGKEPSRLGDIFQEELRELRRQVDGLSAGKARLEIERDNMAADVATLKQRLQDE
MVLRQDAESNLNAFRQDVDEASLNRVQLERKIDTLQDEIAFLKKIHEEELRELQEQLMAQ
QVHVDVDVSKPDLTAALRDIRVQYESVASSNIQETEEWYRSKFADLTDAATRNADALRLA
KQEGNEYRRQLQAMTCDVEALRGTNESLEQQLREMEDRFSVETAGYQDTVGHLEEEIQTL
KEGMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITVPMQSFSNLQFRETSMDTKF
SPEAHVKRSIIVRTVETRDGEIIKESTAERKEIPDSP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcagagagtcctgtcatcttacaggaagcgtttcgggccccagggggccggc
agcgtgggtgggggggtgcggctcagcagtctctcctccagccgcttctccctccatggg
acaccccgccacctgacccactccagcaccatttcccgtctctccctggggtcggctgga
ggggccctgctcctggggacccctgggaaccggctggacttctcggctgactcactcctc
aaggcccagtaccgtgagacgcgcaccaacgagaaggtggagatgatgggtctgaacgac
cgcttcgccagctttatagagaaggtgcgcttcctggagcagcagaacacggtgctggtg
acggagctgacccaactgagggggaaggagcccagccgtctgggggacatcttccaggag
gagctgagggagctgcgcaggcaggtggacggactcagcgctgggaaggcccggctggag
atagagagggacaacatggctgctgacgtggccacactcaaacagagactgcaagatgag
atggttcttagacaggatgcagagagcaacttgaacgcctttagacaggatgtggatgag
gcatctctgaaccgtgtccagttggagaggaagatagacacgctgcaggatgagattgcc
ttcctcaagaagatccacgaggaggagctgcgtgagctgcaggagcagctgatggcccag
caggtccatgtggatgtggacgtgtccaagccagacctgaccgctgctctgagggacatc
cgggtccagtatgagtccgtggcctcctcgaacattcaggagacggaggagtggtaccgc
tccaagtttgccgacttgaccgacgcagcgactcggaatgcagacgccttgcgattggcc
aaacaggagggcaacgagtaccgccggcaactccaggccatgacctgtgatgtggaggcg
ctccgtggaacaaacgagtctctggagcagcagctgcgtgagatggaggaccgtttctcc
gtggagacggctggttaccaggatacagtgggtcatctggaggaggagatccagactctg
aaggaggggatggccagacacctgcaggagtaccaggacctgctcaacgtcaaactggcc
ctggacatagagatcgctacctacaggaagctgctggagggagaggagagcaggatcact
gttccaatgcagagcttctccaacctgcagttcagagagaccagtatggacactaagttc
tctccagaggcccatgtcaagaggagcatcatagtgcggactgtggagactagagacggg
gagatcattaaggagtctacggctgagaggaaggagattcctgacagtccttaa
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