Oncorhynchus keta (chum salmon): 118381926
Help
Entry
118381926 CDS
T09424
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118381926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118381926
Spliceosome [BR:
oke03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118381926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
118381926
NCBI-ProteinID:
XP_052365737
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRNSRGNKGAGERNRKRDLKDVFGDEVEVGARRDVPETGDGVPVKRKR
VPRFEEVEEPEVLPAPPTESPGMLTKIQIKQMMEAATRQIEERKKQLSFVPVSSQQRLPL
PTPQPDPPFASHLLPAPSAPSSGSAQSIAPSQAATFMNDAIEKARKAAELQARIQSQLAM
KPGILGAIGHTGGPHNLVALANLHAMGIAPPKVAEARESNKPAPLILDDMGRTVDASGNE
VELTHRMPTLKANIRAVKREQFRQQLKEKPGEDLESTIYFDGRVNIAPAQRAKKGFKFHE
QGRFEKIAQRIRTKAQLEKLQTEIAQAAKKTGIQASTKLALFAPKKMLGDGQVPIIEWWD
SYILPSNIDLSTETNFVAMELFGVTNLVEHPAQISPPVDTDKPGVTLGVYLTKKEQKKLR
RQTRREGQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQK
AHEEANAARKLTTEQRKEKKVKKLKEDLSLGVHISVYRIRNLHNPAKKFKVEANANQLYL
TGTVVLHRDVNMVVVEGGPKAQKKFKRLMLSRIKWEEHNSKRDDPDADDETKKNNRCSLV
WEGTAKERNYGEMKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLESTDD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaacgggaggtggaggagctacggccctgggtggaacggaccgtgaag
aaggtgctggggttctctgagcctacggtcgttactgcggccctgcactgtgtaggcaag
ggcctggacaagaggaagaccacagaccagctgcgtccattcctggatgagtctgccggt
gggttcgtggagagactatttgaggccctggaggagagccgtaattcccgtgggaacaag
ggtgctggggagaggaaccgcaagagagacctgaaggatgtgtttggtgatgaggtggag
gtgggtgcgaggcgggacgtccccgagacaggagatggtgtgccggtgaagaggaaacgt
gtcccccgcttcgaggaggtggaggaaccagaggtcctacctgcaccccctactgagagc
cctggcatgctcactaagatacagatcaaacagatgatggaggctgccaccagacagata
gaggagaggaagaaacagctgagcttcgtcccagtgtcttcccagcagaggctgcccctg
cccactccccagccagacccccccttcgcctctcatcttctccccgctccctctgccccc
tcctcgggctcggcccagtctatcgctccctcccaggcagctactttcatgaacgatgcc
atcgagaaggctaggaaggctgcagaactgcaggcccgcatccagtcgcagttagccatg
aagcctggtatactgggagccattgggcacactggaggacctcataacctggtggcgctg
gctaacctacacgccatggggatagcaccaccgaaggtggcggaggcccgtgagtcaaac
aagccggcccctctgattctggatgatatgggacggactgtggatgccagcggcaacgag
gtggagctaacacaccgcatgcccaccctcaaagctaatatccgtgcggtgaagagggag
cagttccgtcagcagttgaaggagaagcctggcgaggacctggagtccactatctacttt
gacgggcgggttaacatagcacccgcccagcgagccaagaagggcttcaagttccatgag
cagggacgctttgagaagatcgcccagaggatcagaactaaggcccagttggagaagctg
cagacagagatcgcccaggcagccaagaagactgggatccaggcctccaccaagctggcc
ctctttgcccccaagaagatgcttggggacgggcaggtgcccatcattgagtggtgggac
tcgtacatcctcccctccaacattgacctatccacagagaccaattttgtggcgatggag
ttgtttggagtcacaaacctggtggagcaccctgctcagatcagccccccagtggacaca
gacaagccaggagtgactctgggagtgtacctgactaagaaggaacagaagaagctgagg
agacagactcgcagggagggacagaaagagcttcaggagaaggtccggctggggctcatg
ccccccccagaacctaaagtgcgcatctctaacctgatgagagtgctgggtacggaggca
gtacaggatcccactaaggtagaggcccacgtcagagcacagatggccaagagacagaag
gcccacgaggaggccaatgcagcccggaagctcacaaccgagcagagaaaagagaagaag
gtgaagaagctgaaagaggacctgagtcttggagttcacatctcagtctataggatccgt
aacctccacaacccggctaagaagtttaaggtggaagctaacgccaaccaactgtacctg
acgggcaccgtggtgctacaccgagacgtcaacatggtggtggtggagggaggtcccaaa
gcccagaagaagttcaagaggctcatgttgagcagaatcaaatgggaagaacacaactcc
aagagagatgatccagatgcagacgatgagaccaagaagaacaacagatgcagcctggta
tgggagggcacggctaaggagcgtaactacggggagatgaagtttaagcagtgtcctaca
gagaacatggctagagaacactttaagaagcacggaacagaacactactgggacctggct
ctgagccagagtgtgctggagagcactgatgactga
DBGET
integrated database retrieval system
