Oncorhynchus keta (chum salmon): 118381947
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Entry
118381947 CDS
T09424
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-15
KO
K16499
protocadherin delta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118381947 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118381947 (si:ch73-233f7.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
118381947
NCBI-ProteinID:
XP_035624723
EnsemblRapid:
ENSOKEG00005020172
LinkDB
All DBs
Position
4:complement(49070391..49078188)
Genome browser
AA seq
1025 aa
AA seq
DB search
MIFLGSFEMEHRLTSTRWTPLTGLVVCLLVCACVVDLVLAQIRYSIPEELDHGAFVGNIA
EDLGLDVAKLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPTCFLHLQVV
IENPLELYRVEVEILDVNDNSPSFPWSEFNLEITESAAPGSRFPLESAQDQDVGTNSLRS
YQLSSNEHFVLNIQTRNDGSKFAELVLGTPLDREQQKTHEMVLTAVDGGSPERSGTARIT
ITVLDANDNVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGANGEVSYAFSGHAPLKV
RELFSVDQYTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDVLDVNDNAPE
VILTSVSTPVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVT
SEFLDREAVSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPSYTVYVTENNA
PGAFICSVTAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLR
NFQIRVQAQDAGFPPLSSNVTVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGHL
VAKITALDADAGQNSRLSYQVLQATDPGLVSVALYTGEIRTIRRFVDKDATRQRVVILVK
DNGQPPLSATVSILLSVVDNVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAI
IVLAAVKCYKDRETISGYNLPPFACCCCGGFQPEPPPEVFKKSNLNLQISTGAKVPTNCM
EVNGNGTLSQAYCYKVCLTPESAKSDFMFLKPCSPISTPRNNEAKGADNLAWSAHHRSSS
VNNHSGATTPNELKQPNTDWTLTKNQNSSLKSCNSINMDGTLMRKAMHADPENYMTPMTG
QYWTWGTHMRDYKMSPPATGPPPRSWTPRCTPPPQQQPQPQQPPLPPHPHPHPHPHPPPD
YQHNVYIPGTPSALCTLRPAATHHRSELDVHNSFSTFGKKRRFIHNYEPQTDAAAAVINN
DLYND
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgattttcttgggaagctttgagatggagcacaggctcacgagcacacggtggacaccg
ttaaccgggctggtggtgtgcctgctggtgtgcgcgtgtgtggtggacctggttctggca
cagattcggtactccatccccgaggagttggaccacggggcttttgtcggtaacatcgct
gaggacctcggtttggatgtggccaaactgtctgcccgtcgcttccggatagtctccggt
gccaagaaacagtacttagaggtgaatctggagaacggtattttatttgttaacgagaag
atcgaccgcgaggagctgtgtgaacggagcccgacctgcttcttacatttgcaagtggtg
atcgagaatccgttagaactgtacagagtggaggtggagattttggatgtaaacgacaac
tctcccagcttcccgtggagcgagttcaatctggagattacagagtcagcggcgcccggg
tcccggttcccgttggagagcgcgcaggaccaggacgtgggcaccaactcgctccgatcc
taccagctgagctccaacgagcactttgtactaaacatccagacacgtaatgacggaagc
aagtttgccgagctcgtgctggggaccccgctggacagggagcagcagaagacgcacgag
atggtgctcacagccgtggacggggggtcgccagagcgttcgggcacggctcgcatcacc
atcacggtgctggatgccaacgacaacgtgccggttttcgaccggtctgtttaccgggcg
agcctggtagaaaacgcaccgagagggactttagtgctgaagctaaatgccaccgatttg
gacgagggtgcgaacggagaggtctcatacgcgttcagtgggcacgcaccgctcaaagtg
cgcgagctgttcagcgtggaccagtatacgggtgagatccgagtgaaggggattgtggac
tatgagaaagcgagtgtttatgagctgtatgtgcaggctaaagacaggggtccctcggca
gtggccgtgcacagtaaggtactggtggatgtcttagatgtgaatgacaacgcgccggaa
gtcatcctcacctccgtgtctacacctgtccaggaagacgcgccaccgggcacggtgata
gccgttataagtgtcatggaccgggactcgggagagaacgggaatgtggactgccagatc
cccagcaacgtcccctttcagctccactcctcctttaagaactactacactctggtgact
agtgagtttctcgacagggaagccgtctccgagtacaacatcaccctcacggcccgagac
ctgggctccccgtctctctccacgaggaaaaccatcctcgtccaagtgtctgatattaat
gacaaccccccgcgcttcgcccagccatcatacacagtttacgtgaccgagaataacgcc
ccgggcgcattcatttgctcagtcactgctttcgaccctgattctaatcagaacgcctat
ctgtcctactcgattctagagggtcagatccaaggcatgcccgtgtccacttacgtctcc
atcaactcggacaacggaaacatttatgcgctgcggtcctttgactacgaacagctaagg
aactttcagatacgtgtgcaggcgcaggacgccggtttccctccgctcagcagcaatgtc
acggtaaatgtgttcgttttggaccagaatgataatgctccggttatcgtgtccccattg
cccaagaacgggaccgtggcgacagaggtagtcccgaggtcagtggatgcggggcactta
gtcgccaagatcactgcgctggatgcggacgcaggacagaactcgcgcctctcctaccag
gtgctccaggctacggacccggggctggttagtgtcgccctctacacgggagaaataagg
acgattcgccggttcgtggataaggacgctacgaggcagagagtcgtcatcttggtcaag
gacaacgggcagccgcctctctccgccaccgtctctatcctcctctccgtggttgacaat
gtgccggagtccctgtctgatttcggcgacctcactctgagcccccagcccccctccaac
ctcgccctctacttgatcgtgtcactgagcaccatctcgctaatcttcctggtggctatt
atcgtcctggctgcggtcaagtgttacaaggacagagagaccatcagtgggtataacctc
ccccccttcgcctgctgctgttgcgggggcttccaaccagagccgcccccggaggtgttc
aagaaatctaacctaaacctgcagatctccaccggggcgaaggtgcccaccaactgcatg
gaggtcaatggcaacggtactctgtcccaagcctactgttataaagtatgtctgaccccc
gagtcagctaagagcgactttatgttcttgaagccgtgcagccccattagcaccccgagg
aacaacgaggcaaagggggctgataacttggcttggagcgcgcaccaccggagctcatcg
gtgaataaccattccggagccaccactccaaatgagctcaagcaaccaaacacagactgg
accctcacaaagaaccagaactcctctttgaaaagctgtaactctatcaacatggatggc
actctgatgaggaaggccatgcatgcagacccagagaactatatgacacccatgactggc
cagtactggacctggggcacccacatgagggactacaagatgtctcctcctgccactggg
cctcctcctcgctcttggaccccccggtgcacccctccaccccagcaacagccccaaccc
cagcagcctcctctcccgccacacccccaccctcatcctcacccccacccacctccagac
taccagcataacgtgtacatcccgggcacgccgtcggctctgtgcaccctgaggccagca
gccacccaccaccgcagcgagctggacgtccacaactccttctctacctttggcaagaag
agacgcttcatccacaactacgagccccagacagacgcagcagcagctgtcatcaacaat
gacctgtataatgattaa
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