KEGG   Oncorhynchus keta (chum salmon): 118381991
Entry
118381991         CDS       T09424                                 
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03082  ATP-dependent chromatin remodeling
oke03083  Polycomb repressive complex
oke04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118381991 (rbb4l)
   03083 Polycomb repressive complex
    118381991 (rbb4l)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    118381991 (rbb4l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oke03036]
    118381991 (rbb4l)
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     118381991 (rbb4l)
  Histone modification proteins
   HAT complexes
    HATB complex
     118381991 (rbb4l)
   HDAC complexes
    Sin3A-HDAC complex
     118381991 (rbb4l)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     118381991 (rbb4l)
    PRC2.2
     118381991 (rbb4l)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     118381991 (rbb4l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    118381991 (rbb4l)
  Chromatin remodeling factors
   NuRD complex
    118381991 (rbb4l)
   NuRF complex
    118381991 (rbb4l)
   NuRF complex (fruit fly)
    118381991 (rbb4l)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st MIOS_WD40 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 118381991
NCBI-ProteinID: XP_052359128
LinkDB
Position
Unknown
AA seq 426 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPDGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQGS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcggataaagaagtgtacgacgatgcagttgaggagcgggtgatcaatgaagaatac
aaaatctggaagaagaatactcctttcctctatgacctggtgatgacccacgcgctggag
tggcccagtctcactgtgcagtggctacctgacgtcaacaggccggatggaaaggactat
gcggtccacagactggtactgggaactcacacgtcagatgagcagaatcacctggtgatc
gccagcgtacaggtccccaacgatgacgcccagtttgatgcttcccactacgacagtgaa
aaaggagcagaatttggaggttttggatcagtgagtggaaagatagagattgagatcaag
ataaaccacgagggtgaagtgaaccgggccaggtacatgcctcagaacccctgcatcatt
gctaccaagacccccacctcagacgtactggtctttgactacaccaagcacccttccaaa
ccagaccccagtggtgagtgcagcccagacctgcgcctgcggggccaccagaaggagggc
tacggcctgtcctggaaccccaacctcagtggcaacctgctcagtgcttctgatgaccac
acgatctgcctgtgggacatcggtgctggtcctaaggaggggaagatagtggatgctaag
accatcttcaccggccacactgcagtggtggaggacgtgtcctggcacctgctccacgaa
tcactgtttggctctgtggctgacgaccagaaactgatgatctgggacacacggtccaac
aacacgtccaagcccagccatgcagtggacgcccacactgcagaggtcaactgtctgtcc
ttcaacccctacagcgagttcatcctggccaccggctctgcagacaagactgttgctctc
tgggatctgcgtaacctcaaactgaagctccactcgtttgaatcgcacaaggatgaaatc
ttccaggtacaatggtcccctcacaacgaaaccattctggcttccagtggaacagatagg
aggctcaacgtatgggatctcagtaaaatcggagaggaacagtctgctgaagatgcagag
gacggacctccagaactcctgttcatccatggaggacacacagcgaagatttctgatttc
acatggaaccccaatgagccatgggtcatctgctccgtctccgaggataacatcatgcag
gtttggcaaatggctgagaacatctataatgatgaggagcctgacacccctgcttcagag
ctggagggtcaagggtcgtaa

DBGET integrated database retrieval system