Oncorhynchus keta (chum salmon): 118381991
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Entry
118381991 CDS
T09424
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
KO
K10752
histone-binding protein RBBP4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
oke03083
Polycomb repressive complex
oke04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118381991 (rbb4l)
03083 Polycomb repressive complex
118381991 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118381991 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118381991 (rbb4l)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
118381991 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
118381991 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
118381991 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
118381991 (rbb4l)
PRC2.2
118381991 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
118381991 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118381991 (rbb4l)
Chromatin remodeling factors
NuRD complex
118381991 (rbb4l)
NuRF complex
118381991 (rbb4l)
NuRF complex (fruit fly)
118381991 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
MIOS_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
118381991
NCBI-ProteinID:
XP_052359128
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPDGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQGS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaagtgtacgacgatgcagttgaggagcgggtgatcaatgaagaatac
aaaatctggaagaagaatactcctttcctctatgacctggtgatgacccacgcgctggag
tggcccagtctcactgtgcagtggctacctgacgtcaacaggccggatggaaaggactat
gcggtccacagactggtactgggaactcacacgtcagatgagcagaatcacctggtgatc
gccagcgtacaggtccccaacgatgacgcccagtttgatgcttcccactacgacagtgaa
aaaggagcagaatttggaggttttggatcagtgagtggaaagatagagattgagatcaag
ataaaccacgagggtgaagtgaaccgggccaggtacatgcctcagaacccctgcatcatt
gctaccaagacccccacctcagacgtactggtctttgactacaccaagcacccttccaaa
ccagaccccagtggtgagtgcagcccagacctgcgcctgcggggccaccagaaggagggc
tacggcctgtcctggaaccccaacctcagtggcaacctgctcagtgcttctgatgaccac
acgatctgcctgtgggacatcggtgctggtcctaaggaggggaagatagtggatgctaag
accatcttcaccggccacactgcagtggtggaggacgtgtcctggcacctgctccacgaa
tcactgtttggctctgtggctgacgaccagaaactgatgatctgggacacacggtccaac
aacacgtccaagcccagccatgcagtggacgcccacactgcagaggtcaactgtctgtcc
ttcaacccctacagcgagttcatcctggccaccggctctgcagacaagactgttgctctc
tgggatctgcgtaacctcaaactgaagctccactcgtttgaatcgcacaaggatgaaatc
ttccaggtacaatggtcccctcacaacgaaaccattctggcttccagtggaacagatagg
aggctcaacgtatgggatctcagtaaaatcggagaggaacagtctgctgaagatgcagag
gacggacctccagaactcctgttcatccatggaggacacacagcgaagatttctgatttc
acatggaaccccaatgagccatgggtcatctgctccgtctccgaggataacatcatgcag
gtttggcaaatggctgagaacatctataatgatgaggagcctgacacccctgcttcagag
ctggagggtcaagggtcgtaa
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integrated database retrieval system