Oncorhynchus keta (chum salmon): 118382111
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Entry
118382111 CDS
T09424
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118382111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118382111
Transporters [BR:
oke02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118382111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
Cas6_I-A
Motif
Other DBs
NCBI-GeneID:
118382111
NCBI-ProteinID:
XP_052368623
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
CWSLAWTSRVWVRYTATVLSCTFLCISRVGKLVDSSLDIQAIQLPPLQYQHERRSHDWTM
DDTSSYSGMTDVTDFTDSGTLISEDCSNIKLNTGARLYMQQFYAMFLKRALYSWRNWKVI
VAQFLVPLVFTVLALVVAKTLPGRHDSPQLRLALGRYGPTTVPVALEPGKGPLAIALAQV
YSSQLAAQEAQDVNIRDFTEYVLTKTEEEGGAFNERCVVGASFRGGTGKFAEVTAYFNNQ
GYHTAATALMMVDNTLFKMLAGPNASIMTGNMPMPRNVSESAQSQLTEGQTGFAIAINLM
YGMASLSSTFALLLVTERSLKSKHVQQVSGVYLSNFWFSALLWDLVNFFLPCMLMLVVFR
AFGVKAFVADNHLVDVLLLLLLYGWAVIPLMYLLSFLFSTAATAYTRLTIFNIISGTATF
LTVTIMTIPELYLQDLSRNLDKVFLLFPNYCLGMSFSQFYQNYQFITFCTPNPVTTAFCR
AFNITYQENYFSMSEPGVGRFLVALSLQGVVFITLLFIIEMQCVKTLRRFLTHLASRRKQ
LPLMGDAALLPEDRDVAEERKRVLECQPIVESMVGSPLILQDLSKVYSSGETVLAVDRLS
LAVGKGECFGLLGFNGAGKTTTFKMLTGDETVTSGDAYIDGYSILRDVKKVQQRIGYCPQ
FDAVLDHMTGRETLSMYARLRGIPEKYVSGCVENVLRSLLLEPHADKLCRSYSGGNKRKL
SAAVALIGGPPVIFLDEPSTGMDPVARRLLWDAVTRTRESGKAIIITSHSMEECEALCTR
LAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVRVHKEVEDSDLQLFKDFIESTFPGSLLT
DEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYNIDDYAVSQISLEQVFLSFAQFQHCSRK
NT seq
2704 nt
NT seq
+upstream
nt +downstream
nt
atgttggtctctagcctggacatccagggtttgggttcgatacactgctactgtactaag
ctgtacattcttgtgtatttccagagtggggaagctggtggattctagcctggacatcca
ggccatccagcttcccccgctgcagtaccaacacgagagacgctcccacgactggaccat
ggacgacaccagcagctacagcggcatgacggacgtcaccgacttcactgacagcggcac
gctcatctccgaggactgctctaacatcaagctcaacaccggggccagactgtacatgca
gcagttctatgccatgttcctgaagcgggcgctctatagctggaggaactggaaggtgat
tgtggcccagttcctggtgcccctggtgttcaccgtgctggccctggtggtggcaaagac
cctccccgggcgccacgactcaccgcagctgaggctggcactgggccgctacggccccac
caccgtgcccgtggccctggagcccggcaagggaccgctggcaattgccctggcacaggt
gtattcttcacaattggccgcccaggaagcccaggacgtcaatattagggacttcacgga
gtacgtgctcaccaagaccgaggaggagggcggggcattcaacgagcgctgcgtggtggg
tgcatcattcagaggcggcacggggaagtttgccgaggtcacggcctacttcaataacca
gggctaccacacggccgctacagccctgatgatggtggacaacaccctgttcaaaatgct
ggccgggcccaacgcatcgattatgactggaaacatgcccatgccccgcaacgtctccga
gagcgcccagagtcagctgacggaaggtcagacgggctttgccatcgccatcaacctgat
gtatggcatggcatccctgtccagtacctttgccctgctcctggtcacagagcgttcact
caagtccaagcacgtacagcaggtcagcggcgtctacctctccaacttctggttctctgc
actgctctgggacctggtcaacttcttcctgccctgcatgctcatgctggtggtgttccg
ggcgtttggggtcaaggccttcgtagcagacaaccacctggttgacgtgttattactcct
gctgctatatggctgggccgtcatccccctcatgtacctgctcagcttcctgttctccac
cgctgccaccgcctacacccgcctcaccatcttcaacatcatcagcggcaccgccacctt
cctcaccgtcaccatcatgaccatcccagagctatatctacaggacctgtctcgtaacct
ggacaaggtgttcctgctcttccctaactactgcctgggcatgtccttcagccagttcta
ccagaactaccagttcatcaccttctgcacccccaaccccgtgaccacggccttctgccg
tgccttcaacatcacgtaccaggagaactacttctccatgtcggagccgggggtggggcg
tttcctggtggccctgtccctgcagggtgtagtcttcatcaccctcctcttcatcatcga
gatgcagtgtgtcaaaaccctccgccgcttcctcacccacctcgccagcagacgtaaaca
gttgcctctgatgggggatgcggccctactgccggaggacagggacgtagcggaggagag
gaagagggttctggagtgtcagcccatagtagaatctatggtggggagcccactcattct
gcaggacctcagcaaggtatacagcagtggagaaacagtactggcggtagacagactctc
tctagcagtggggaaaggagagtgttttggcctgctgggtttcaatggcgcagggaagac
caccaccttcaagatgctcaccggggacgagactgtcacctctggcgatgcctacattga
cggctacagcattctgagggatgtcaagaaggtacagcagcggattggctattgcccgca
gttcgacgctgtcctggatcacatgacaggaagagaaacgctgagcatgtatgctaggct
ccgggggatacccgagaaatacgtgtcaggctgcgtggagaacgtgctacggtccttact
actggagccccatgctgacaaactgtgccgcagctacagtgggggcaataagaggaagct
gagtgcggctgtggctctgattggtggacccccggtcatcttcctggacgagccatccac
tggcatggacccggttgctaggcgactgctgtgggacgctgtgacgcgcacccgagagtc
tggaaaggccatcatcatcacctctcacagtatggaggaatgcgaggccctgtgtacccg
gctggctgtgatggtgaacggtcagtttaagtgtctgggcagtccccagcacctgaagag
taagtttggcagcggatacacactactggctaaagtacgagtgcacaaggaggtggagga
tagcgacctgcaactcttcaaggacttcattgagagcaccttcccaggaagtctactaac
agatgaacaccagggcatggtgcactaccacttaactgacaagactcttacctgggcaca
ggtgtttggcaccctagaggcagccaaagagaagtacaacatcgacgactacgctgtgag
ccagatctccttggaacaggtgttcctcagcttcgcccagttccagcactgcagcaggaa
atag
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integrated database retrieval system
