Oncorhynchus keta (chum salmon): 118382141
Help
Entry
118382141 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04217
Necroptosis
oke04622
RIG-I-like receptor signaling pathway
oke04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118382141
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118382141
04625 C-type lectin receptor signaling pathway
118382141
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118382141
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118382141
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118382141
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C67
118382141
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118382141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
118382141
NCBI-ProteinID:
XP_052358526
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PSKGKRSIRVLDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVILVEEEMDFHPLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFTPRGSSSDKSSSGQSKPKSKGLGLQCGSRSKSELYYTLNGSSVD
HPVQAKSKCTWYIDEVGEDPAKSLTDTPPDFNETTPPTRAPPSASLSNDNKFHSLPFSLS
RKTGPNGSMSHGPLSLSVQSVMGEQMGEQMPEPPLPSPPSPRPPSPPSSRGGGGVPGLEV
GSLVEVKENPPLCGVIRWVGLPPGLPEPLAGLELEEECVGCTDGTFQGTRYFNCAPKKAL
FVKLKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKK
GIQGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVDYYRETQELLRTEIVNPLRIHG
YVCATKVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDC
YFYQIFMDKKDKVGVPTSQQLIEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPS
LELDITDLLEDTPRECRICGGLALYECRECYEDGDITAGKIKQFCEKCNTQVHLHPRRKA
HRHGKLSVPKELQEGVWRQGSFPRQRMELFAVLCIETSHYVAFIKYGHQDSAWLFFDSMA
DRDGGQNGFNIPQVSPCPEVGAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTM
SLYK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcccccccagaagaccttgaggatc
ccccggggcagcctgggacaggcctgccaggagaggaacagcctggggcgcacgctgccc
cccagcaaaggcaagaggagcatacgcgtcctcgaccagaccaacgtggtgctgagcctg
gatgagcgggacgtcctggagctggatgagaagctagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagcccaggctggagcgggccagggac
atcgactgtggctccaaggtgcgcgtgcagctgcgttcgggggatgaacctttgcccggg
gtagtccgatttaaaggatctctcctcccagacagggctctctccggggtctggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccagggccga
cagctgttccgctgtgaagatgagtgcggggtgttcgtggccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcatcctggtggag
gaggagatggatttccatccgctggagatcaactccagggtccttgtccagaccagagag
gggccggagaggggaaccataatcttctgtgacctgctgcctgggaacgagagcctgggg
tactatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgatggg
aagctgctgtgtaatttcgccagtctggaacacacccgtctagtccccatctgtgacgta
atgccagaatactccatgcaggaccagaggctgcagaagcacagttttacccccagaggc
agcagcagtgacaagtcctcctctggccaaagtaaaccaaagagcaaaggcttaggtctt
cagtgtgggagtagaagcaagtcagaattgtattatactttaaatggcagctctgttgac
cacccagtccaggccaaatccaaatgcacatggtacattgatgaagtaggggaagaccct
gccaagtccctcacagacacgccccctgacttcaatgaaaccacacctcctaccagggcc
ccaccctctgcttccttgtccaatgacaacaagttccactccctgcccttcagcctgagc
cgtaagactgggcccaatggcagcatgagtcatggacccctctcgctctccgtgcagtca
gtgatgggagagcagatgggagagcagatgccagagcccccattgcccagccctccctcc
ccgaggcccccctcaccccccagctctcgcgggggtgggggagtgcctggtctggaggtg
gggtccctagtggaggtgaaggagaacccgcccctgtgtggggtcatccgctgggtgggg
ctgcccccgggactaccagagccactggctggcctggagctggaggaagagtgtgttggc
tgtacagacggcacctttcaaggtacccgttacttcaactgcgcgcccaagaaggccctg
tttgtgaagctgaaatgctgccggccggactcccgtttcccctccctacaccactcctcc
aaccccattgagagatgcaactctatcgctttcgggggttatctgagtgaggtggtgcat
gagaacactcctccacgcactgagaatgacggtctagacatcatggtgggcaagaagaaa
ggtatccagggacactacaactcctgctacctggactccacactcttctgcctgttttcc
ttcagctcagtcctggacacagttctgctgaggccgagatccaagactgacgtagattat
taccgagagacacaggagctgctacgcacagagatagtcaaccccctgcgcatacatggc
tatgtgtgtgccactaaagtgatgaagctcagaaggatactggagaaggtagaagctgcc
tcagggttcacatctgaagaaaaagatcctgaggagttcctcaatattctgttccatcac
atattgagggtagaccccttactcaagctgaggtcagcaggtcagaaggttcaggactgc
tacttctaccagatcttcatggataagaaggacaaagtgggcgtgccaacgagccagcag
ctcatagagtggtccttcatcaacagtgacctcaagtttgctgaggctccttcctgcctt
atcatccaaatgcctcgctttgggaaggacttcaagatgttcaacaagatcttcccctca
ctagagttagacatcacagacttacttgaagacactcccagggagtgtcgaatctgcggg
ggtctggctctgtatgaatgcagggagtgctatgaggacggtgacatcactgccgggaag
ataaaacagttctgtgaaaagtgcaatacacaggttcacctccacccgaggaggaaggcc
catcgccacggcaagttgtccgtccccaaggaactgcaagagggtgtgtggcggcagggt
agcttccctcgccagaggatggagctgttcgctgtgctctgcatcgagaccagtcactac
gtagcgttcatcaagtacggccaccaagactctgcatggctcttcttcgacagtatggcc
gaccgcgacggagggcagaatggcttcaacatcccccaggtgtctccatgtccggaggtg
ggggcctatctgaagatgacccctgaggagctgcacgccctggaccccaagagcatccag
ggccaggcccgccgtctgctgtgtgacgcctacatgtgcatgtaccagagccccaccatg
agcctgtacaagtag
DBGET
integrated database retrieval system
