Oncorhynchus keta (chum salmon): 118382199
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Entry
118382199 CDS
T09424
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118382199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118382199
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
NGL family
118382199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Sp38
FlK
Ig_6
DUF4293
Syndecan
CMV_1a
Motif
Other DBs
NCBI-GeneID:
118382199
NCBI-ProteinID:
XP_052321934
LinkDB
All DBs
Position
17:34801015..34907531
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AA seq
645 aa
AA seq
DB search
MLNKMTSSWQQQTMRGPRWNRVLSDPLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRTTVGHNVGPTP
SAGSWETVSSTSTTTTTARTPLSTRVTEKTFTIPVTDLNGGSMTGLDEVMKTTKIIIGCF
VAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTGGPAMEGHLTLPPLEH
EHLNHYNTYKTAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaaaatgacctcttcttggcagcagcagacgatgagaggtcctaggtggaac
cgcgtcctgtccgaccctttgttcgtgctgcttctggccctccagctcctggcggtggcg
ggcctggtgcgcgcgcagacctgcccatccgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacccggcggggactacgtgatgtcccagacggcatctccaccaacacacga
tatctgaaccttcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctccagctcagcaagaaccacatccgcaacattgagattggggct
ttcaacggcctggctagtctcaacaccctggagctgttcgacaaccgcctcaccaccatc
cccaatggggcctttgagtacctctccaaactcaaggagctgtggctgaggaacaaccca
atcgagagcattccatcgtatgcgttcaacagggtgccctcactacggaggctggactta
ggggaactgaaacgcctctcgtatatctcagagggagcttttgagggactcagcaacctg
cgctacttgaacctgggcatgtgcaatctcaaggagattcccaacctcatacccctggtc
aagctggacgagctagagatgtcagggaaccagctgacggtcatcagacccggctccttc
aaagggctgatccacctgcagaagctgtggatgatgcacgcccagatccagaccattgag
aggaactcctttgatgacctgcagtcgcttgtggagctcaacctggcccacaacaacctc
actctactgccccatgatctcttcacccccctgcaccacctggagagagtccacctccac
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gtgccggccaacaccagctgctgcgcccgctgcagttccccagcaagccacaaggggcgc
tacatcggtgagctggatcagaactatttccattgttatgcaccggttatcgtagagcct
ccggctgacttgaacgtgacagagggcatggcagcggagctgaagtgcagggccagttct
ctgacctcagtcagttggattacacccaacggctccattatgacccacggtgcatacaag
atccgcatttccgtgctaaacgatggcactctcaacttcaccaacgtcaccatgcaggac
acgggcacctacacctgcatggtgagcaactcagccggcaataccacagcatctgccacg
ctcaacgtgtcatccacagagaacgtcctcagctactttaccacagtgacagtggagacc
atagagccagtgcatgacgaggggcgcaccacagttggacataatgtgggccctaccccc
tctgccggctcctgggagaccgtctcatccacctctaccaccaccaccacggcccggaca
cccctctccacccgggtcacagagaagacctttaccatccccgtcacagacctaaacggt
ggctcaatgaccggcctggatgaggtgatgaagaccaccaagatcatcataggctgcttt
gtggccatcaccctcatggccgctgtcatgctcatcatcttctacaagatgagaaagcag
caccaccagcagaatcaccatgcaccccagcgcaccatcgagatcatcaacgtggacgag
gactgtgtgacgggtgggccggccatggagggccacctgactcttcccccgctcgagcat
gagcacctcaaccattacaacacctataagactgcgtacaaccacgtctccaccatcaac
tccatacacagctcggcgcacgaacctttgttaatccgggccagctcgaaagacaatgta
caagagacccagatctaa
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