Oncorhynchus keta (chum salmon): 118382332
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Entry
118382332 CDS
T09424
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118382332
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118382332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
zf-HC5HC2H
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
118382332
NCBI-ProteinID:
XP_052369420
LinkDB
All DBs
Position
Unknown
AA seq
2400 aa
AA seq
DB search
MQSFSRERSGFHGNQPCYQQEHHELSRLESYRQHPHHGQTRQVYEAHALATATGMPPAGP
GAGPGPGSGPIPGPKDCYSQQAYPGYPQGNGGGVGGGVGGGGGSTPHDKKAYSGGSQGPP
PTPQHMQAGGYSNHMGPGGYPAQYMSEGHLQQSKWDDPAQLAQYEQEMVGRMEPGPPGSS
QYLDQNMLAHSQSQCHQPHQASAPVYTSPHHQPHPANPGQSPLMYPQSHLHYPQHPPSPL
PSSSSYMEKCSPMPHCYKGYSMPPSSQYTRQMGSHSGLKQGGYRPPPQNSYSYQQTPSRG
GYEPQPPLQGIPTPQETHPKYQHFSQPQQNYCLSELSVRSPEQYYQTCSPASSHSPARSV
GRSPSYSSTPSPLMTNPESFQYSQPPMTPGAASSSSSSSAGLQDQGLLMPPRSHPSSSPN
VAHPTPQHSYTQGVSMKERFSEKLLANPSLWSLNALTSQVENISNNVQQLLLSEAMVANK
KGAKRNSIGSSGGSSSKKEEVYKGVPGGPEGQHGGGPMQDPYSTNQHQLVPMEMQEGGYS
SSSDEQLERGYYYCGQGRSPAQAPNNTHLGLDTASSCSMTSPDDMSTRSGDSVSGLQSVA
SRDNMTPDPRSQGGHEPRQTPMKSVGDERSPVSVTIPSPMKQESQSPPDIQRLGLPLKEN
FEELAWTEKIADYEDDGVKKTSDSESDRRASDNVTDTSEKREKWPEDEKGPALYSKINKA
VTEGKSYCYDENMYHKIQNKYDRGKGDSADKSPSFSDSSHKGDLGQEMKSEAFKSESPTD
SESSVKTSPYISRGDLDQDQYLTEKEDSSENTSPTPRDEALDQRLSASEKRESREEEEED
EEGEEERNQKSISSPLSAEEREREESESLPSTEKDLNNITSPQEEPSGELCSRTEGQSLA
EPQPYSNTESAETESQAAQPDATAAAAESPESGSAICDTPPQSHSAMMVFSALSEIATPP
APSHTRDHIDHSDSNVLEPDSPQLPGKSILHSAPSWANTPPSPKKGDEDMEPGISCPSAV
TPSAKPEPVAPSAHPQAFGRKHSRGRRRLMHSGVEFRRQLSVEREGESAPSPPQKPCMPS
SKSALFSDQLDMAAHQDIITTSETPKLLVEGSRSRMCTRSFNAQDTPPKDPQPPERRKPG
RKPGSKPGPKPGPKSGLKPGPKPGLKPGPKPGSKPSLKPGPKPGLKPDSKPSPKPGLKPG
PKPGPKTVLKPGPKTGPKPGPKPGPKPTEGAPRGRPRGTGSKSKLAEQEGPIQPITAGPG
RGQKSLSINSQQGDGKQEVKAPGKDGKNMVLRSRKPPQDKLPKEKEKAQSEGILTQTLTG
ITKPNAVLQNEERMSIEPAIPVFPNQTDTSITDTSVTDSNKPDTSVTDTSKPDTSVTDTR
VTDVSVTDTSKPDTSVTDTSVTDVSVTDTSKPDTSVTDTSVTDTSKPDTSVTDPSKTNSS
ITDTSKPDTSVTDTSNPDTSKTDTSETDTIATDVSVTDTRVTDTSLSDPNVTDTSVTDTS
VSDPNVTDTSVTDTSVTDTRVTDTSVSDPNVTDTSVTDTSVTDTSVTDTSIKDNSVTDTS
VTDNSVTDISIPVAPPEKPKEPAVAVPLETAPVTPLKRKPSPLPLEPPVKKKRGPKPKPK
PQQPQPETPHSDQVNQPPLVKPKEMGVRGPKRRLKRGRHIKASLITVLAKDNPPPTMADG
DVVSEMPSVPSQCPTKTKYLPPRKGRGLKYEAMVQKINSGTGSKKHPPTPQPESTEATVD
EVTSKPVSLPVSEESEAPVAAVSAPDVSREELARDVGSSTGAQNTEQERRVQQNTGEGVQ
PEPLPSGVPDAAAASGANKPTRTKRRKWAMVESTDATVVAMETGSLIINTPRLAKQRAIK
NNHEMHLKQRRRKRKGGQPSEGPVADEEVETTTAEQQTETPTDTALTTTPALPAGPGEIT
DRPQVIATEMIQPPPSKRGRKPSSSPSKKRGRAPGEQQSSKPLRVHKKPGPKKGIKDAME
VIEAVVKAAGREARLKKKKWKKESPAVSEEKQPEPSLKQVLSKTPKSRIKHSFCPYVRMD
SSRDFTSLCTIVNRRDEEMKMVLQKPRKKSPDKIKNPVTVAKAITSSSAMLQGPLVNKAL
IDRCLTCCLCGKPANYRELGDLCGPYFPEDSIPRKILSARHIETLRENRDKISSNSSIRE
PSSSTPTSEGDPSFKKEVCKKVDMETVTKEGSSSSGGSHHHQPHPHHWRPRRAERAPAEG
GSTHRPTLRDRFRRMQKLQGERRAAEATAGGQEGGNGGGGLLQRLQGEAEAKEHWAHENC
AIWTNGIIMVAGRLYGLKEAVQTSTETSCSKCQRVGASISCCWKGCPHKYHYICAKEIGK
SPQREREERGGEGWREEEEIGKSPQREREERGGEGWREEEIGKSPQRERREEERDGERRR
NT seq
7203 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgttcagcagagagaggagcggtttccatggcaaccagccctgctaccagcag
gagcaccatgaattatcacgcctggagagctaccgacaacacccccaccacggacagacc
aggcaggtctatgaggcgcacgcgctggccaccgctacagggatgcctccagcgggacca
ggggccggacctggaccaggaagcggacccatacctggacctaaggactgttacagccag
caggcataccctggatacccccagggtaatggaggtggtgtgggtggtggtgtgggtggt
ggaggaggttcgacgcctcatgataagaaggcttacagtggggggagccaaggacctcct
cccactccccagcatatgcaggcgggcggctacagcaatcacatgggcccggggggatac
ccggcccagtatatgagtgagggccacctccagcagtctaagtgggacgacccagctcag
ctagctcagtacgagcaggagatggtaggcaggatggagccaggtccccctgggtcctcc
cagtatctggaccagaacatgctggctcactcccagagccagtgtcaccagccccaccag
gcctctgctccggtctacaccagcccacaccaccagccccatcccgcaaacccaggccag
tccccgttgatgtacccccagagccacctccactacccccaacaccccccgtcccccttg
ccatcctcctcctcctacatggagaagtgcagcccaatgccccactgttacaagggatat
agtatgccgcccagctcccagtacactaggcagatgggcagccacagtggtctgaagcag
gggggataccgcccgccaccccagaacagttacagctaccaacagactccctccaggggt
ggctacgagccccagcccccactacaaggcattcccactccccaggagacccaccccaaa
taccaacacttcagccagccccagcagaactactgtctgtccgagctgtctgtcagatcc
cctgagcagtactaccagacatgtagtcccgcctccagccactcccctgcacgctctgta
ggccgctcgccctcctacagctccaccccttcccctttgatgaccaatccagagagcttc
cagtacagccagccaccaatgaccccaggggcggcttcttcgtcctcctcttcctcagcg
ggtctgcaggaccagggcttgctgatgccgcctcgctcccacccgtcctcgtcccccaac
gtggcccacccaaccccgcagcacagctacacacagggggtttccatgaaggagcgcttc
tctgagaagctgcttgccaaccccagcctgtggagcctgaatgccctcacctctcaggtg
gagaacatctccaacaatgtgcagcagctgctgctctccgaggccatggtcgccaacaag
aagggggccaagcgcaacagcattgggagcagtggaggcagctcctccaagaaggaagag
gtttacaaaggagtgccaggaggccccgagggtcagcacggtgggggtcccatgcaggac
ccctacagcaccaaccagcaccagctcgtccccatggagatgcaggagggggggtactcc
agtagttctgacgagcagctggagagggggtactactactgcggccagggcaggagccca
gctcaggcccccaacaacacacacttgggcctggacacggcctcatcctgctccatgacc
tctccggatgacatgtccacccggtctggtgactctgtgtccggcctgcagagcgtggct
tccagggacaacatgacccctgaccccaggtcacaggggggacacgaaccccgacaaacc
cccatgaagagcgtgggggatgagaggtcccccgtgagtgtgacgattcccagccccatg
aagcaggagagccagtcccctccagacatccaacgtcttggcttgccactgaaggaaaac
tttgaggagttggcctggacagagaaaatagcagactacgaggatgatggcgtgaaaaag
acctccgacagcgagagtgaccgcagagccagcgataatgtcacagatacctctgagaag
cgggagaaatggccagaggacgagaaaggaccagcactgtatagcaagatcaacaaagca
gtgaccgagggaaagagctactgctacgacgagaacatgtaccacaagatacaaaacaaa
tatgaccgaggcaaaggggactcggcagataagtccccaagcttctcagactccagccac
aagggagacctgggccaggagatgaaatcggaggccttcaaatccgaatctcccactgac
tctgagagctcagtgaagacatccccctatatttccaggggtgaccttgaccaagatcaa
tatttaacagagaaggaagacagctcggagaacacatcccctaccccgcgggacgaggct
ttggaccagaggctctccgcctcagagaagagagagagcagagaagaagaggaggaggat
gaggagggggaggaggagagaaaccagaagtccatatcttctcctctgtctgctgaggag
agagagagagaagagagtgagagcctgccatcaactgagaaggacctcaacaatataacg
agcccacaggaggagccttctggagaactgtgcagcagaacagaaggccagagcctggct
gagcctcagccttacagtaacacagagtctgcagagacagaaagccaagcagcacaaccg
gatgcaacagcagcagcagcagaatccccagaaagtgggtcagccatttgtgacactcca
ccccagtctcactcagccatgatggttttctcagctctcagcgagatagcaacacctcca
gctccgtctcacaccagggaccatattgatcacagcgattccaacgtgctggagcctgac
tcccctcagctgccggggaagtccatactgcactcagcgccctcctgggccaacacccca
ccctcgccaaagaaaggtgatgaggacatggagccgggcatcagctgcccaagcgctgtg
accccctcagccaagccagaacccgtggccccatctgcacacccgcaggctttcggccgg
aagcacagccgaggcaggaggagactgatgcactcaggtgtggaattcaggagacagctg
agtgtggagagagagggggagagtgccccctcgccaccgcagaaaccctgcatgccctcc
agcaagagtgctctgttctccgatcagctagacatggccgctcaccaggacataatcaca
acgagcgagacacccaaactgcttgttgagggctcccgctccagaatgtgcactcgctca
ttcaacgcgcaggacactcctcctaaggatccccagccccctgaaagacggaaaccaggg
cggaaaccaggttcgaaaccaggcccaaaaccaggcccgaagtcagggttaaaaccaggg
cctaaaccaggactaaaaccagggccaaaaccaggttcaaagccaagtcttaaaccagga
ccaaaaccaggtttgaaacccgattcgaagcccagcccaaaaccaggtttaaaacctggg
cctaaaccaggcccaaaaacagttctaaaaccagggcctaaaacgggtccaaaaccagga
ccaaaacctggtccaaaaccaactgaaggagcaccccgtggtcgtcccaggggtacgggc
tctaagtcgaagttggcagaacaggaaggtcccattcaacccataacagcgggtccagga
agaggccagaagagcttgagcatcaacagtcagcaaggtgatgggaaacaggaagtgaaa
gctccaggtaaggacggaaagaacatggtcctgagatccagaaagcccccccaggataag
cttccaaaggaaaaagagaaggcgcaatctgagggaatcctgactcaaaccctgacaggt
ataacaaagcccaatgcagtgttacaaaatgaggaacgtatgagcatagagccagccatc
cctgtctttcctaaccagacagacacaagtataacagacaccagtgtaacagactccaat
aaaccagacaccagtgtaacagacaccagtaaaccagacaccagtgtaacagacacccgt
gtaacagatgtcagtgtaacagacaccagtaaaccagacaccagtgtaacagacaccagt
gtaacagacgtcagtgtaacagacaccagtaaaccagacaccagtgtaacagacaccagt
gtaacagacaccagtaaaccagacaccagtgtaacagaccccagtaaaaccaacagcagt
ataacagacaccagtaaaccagacaccagtgtaacagacaccagtaatccggacaccagt
aaaaccgacaccagtgaaaccgacaccattgcaacagacgtcagtgtaacagacaccaga
gtaacagacaccagtctatcagatcccaatgtaacagacaccagtgtaacagacaccagt
gtatcagatcccaatgtaacagacaccagtgtaacagacaccagtgtaacagacaccaga
gtaacagacaccagtgtatcagatcccaatgtaacagacaccagtgtaacagacaccagt
gtaacagacaccagcgtaacagacaccagcataaaagacaacagtgtaacagataccagt
gtaacagacaacagtgtaacagacattagtatacctgtcgctccacctgagaaacctaaa
gaaccagctgtagctgtacctcttgaaactgcacctgtaactccactcaaaagaaaaccc
agtcctctgcctctagagccgccggtgaagaaaaagcgaggtccaaaaccaaaaccaaaa
ccacaacagccccagcctgaaactccccattctgaccaggtcaaccagcctccattagtc
aaacccaaggagatgggtgtccgagggcccaagagaaggctaaagagaggcagacacatc
aaggcctctctgatcactgtgctggccaaagataaccctcctcccacaatggctgacggt
gatgtggttagtgaaatgcccagtgtcccttctcagtgtcccactaaaaccaagtacctc
cccccgcgcaaaggcaggggtctgaaatacgaggccatggttcagaaaataaactcgggc
accggttcgaagaaacacccgccaacaccacagcccgagagcacagaggcgacagtagat
gaagtgacgtcaaagcctgtgtcgctgcccgtctcggaggagagcgaggccccagtggcg
gcggtgagcgcccctgatgtgtcacgggaggagttagcaagggacgtggggagctccacg
ggggcccagaacacagaacaggagagaagggtgcagcagaacaccggggagggggtgcag
cctgagccactcccatcaggggtgccagacgctgcagcggcgagtggcgccaacaaaccc
accaggaccaagaggaggaaatgggccatggtagagagcacggacgccacggtggtcgcc
atggagacggggagcctgatcatcaacacgccgcggctggccaagcagagggccatcaaa
aacaaccacgagatgcacctgaaacagaggaggaggaagaggaaaggaggacagccttca
gaggggcctgtggctgacgaggaggtagagacaacaacagcagaacagcagacagagaca
cccactgacacagcgttaacaacaacgcccgctctaccagccggcccaggtgagatcaca
gacaggccgcaggtgatcgccacagaaatgatccagccgcctccctccaaacgagggagg
aagccctcttcatccccctccaaaaagagagggagagcaccaggtgaacagcagagcagc
aaacctctgagggttcacaaaaaacctggtcctaaaaagggaatcaaagacgccatggag
gtgattgaagcggtggtaaaggctgcagggagggaggccagactcaagaagaagaaatgg
aaaaaggaaagccctgcagtgtcagaggaaaagcagccagagccctctctcaaacaggta
ctgagtaagactcctaaaagcagaatcaaacactccttctgtccatatgtgcgtatggac
agctccagagacttcacctctctctgtaccatcgtcaacaggcgcgatgaagagatgaag
atggtgcttcagaagccccggaaaaagagcccagacaaaattaaaaacccagtcacagtt
gccaaggcgataaccagctcctcagctatgctccaggggcccttggttaacaaagcgtta
attgacaggtgtctaacgtgttgcctgtgtggaaagccagcaaattaccgtgagctgggg
gatttgtgtgggccctacttcccagaggatagcatcccccgcaaaatcctgtcagcaaga
catatagaaaccctgagggaaaaccgagataaaataagctccaacagtagcatcagggaa
ccaagcagcagcaccccaacaagcgaaggagaccccagcttcaaaaaggaagtttgtaaa
aaggtggatatggagacagtcacaaaggagggcagtagtagtagtggtgggagtcatcat
catcagccccacccccaccattggcgccccaggagggcagagagggcaccagcggagggc
ggaagcacgcaccggcccaccctacgggatcggttcaggaggatgcagaagctccagggg
gagaggagggctgcggaggccacagctggtggtcaggaagggggaaatggagggggaggc
ctccttcagagactgcagggggaggctgaggctaaggaacactgggcccatgagaactgt
gctatctggaccaatgggatcatcatggtggccgggaggctgtacggcctgaaagaggct
gttcagacctctacagaaacgagctgttccaagtgccagagagtgggcgcgtccatcagc
tgctgctggaaaggctgccctcacaaataccactacatctgcgccaaggagataggtaag
agccctcagagagagagagaggagagaggaggagagggatggagagaggaggaggagata
ggtaagagccctcagagagagagagaggagagaggaggagaggggtggagagaggaggag
ataggtaagagccctcagagagagaggagagaggaggagagggatggagagaggaggaga
tag
DBGET
integrated database retrieval system
