Oncorhynchus keta (chum salmon): 118382455
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Entry
118382455 CDS
T09424
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118382455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118382455
03036 Chromosome and associated proteins [BR:
oke03036
]
118382455
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118382455
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118382455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118382455
NCBI-ProteinID:
XP_052374021
LinkDB
All DBs
Position
4:86354582..86460468
Genome browser
AA seq
2494 aa
AA seq
DB search
MSKASAESIDQVMEEEVGQLPITDQMEEEEEEAGSSTETEKPSSSHTKRKPSVAAKEVGG
NESDTSDESGQDDGASDGTLVVRPPAGTDNKEDKSRGAMTLRVDLSRRKTGQMSKASAES
TDQVMEEEVGQLPITDQMEEEEEAGSSTETEKPSSSHTKRKPSVAAKEVGGNESDTSDES
GQDDGASDGTLVVRPPAGTDNKEDKSRGAMKLRVDLSLRKTGQMSKASAESTDQVIEEEA
GQLPITDQMEEEAGSSTETEKPSSSHTKRKPSVAAKEVGGNESDTSDESGQDDGASDGTL
VVRPPAGTDNKEDKSRGAMKLRVDLSRRKTDTTLQERIDCTACGQQVNHFQRHSVFEHPM
LHVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRK
ELSMITDEDSKWSCYICSPQPLSDIASNCSNILTKLESFWRTGRKKEREEKEGKEKERKE
VKGHSKGKGHHHHGKAVVNGKEHSDGSGTLTFSYKTLKVPKELVKRTKKLIETTTGLNNT
FIHFIQQAEEEQGAGGGGSGTRHRHLKAFRSVLADLKKAHAALEKDLESQFTSQDQGMQN
GDAVSNTDGHDGHDQIDNGQEAEEDKMADTEDGEEDGGVSEDTEMEGSPTPTPQDHSETG
SQAKDQTVVKMEEEEDGTEEEADRDKDIVSVGPSVPDELFQMVKSLADSTGLTPGNDATE
LTAASQSENPAARSTRKSHDTQKEKAMPKVKNLILKLTPVPVVTTRASRSKSKDGEKERS
KDGGKERSKDGGKDGGKERSKDGGKERSKDGGKDGGKERSKDGGKERSKDGGKERSKDGG
KERSKDGGKERSKDGGKERSKDGGKERSKDGGKERSKDGGKERSKDGSKDGGKERSKDGG
KERSKDGGKERSKDGGKERERSKDGGKEVEGDGASEEDSRCSSRTKTTPLRKSPEGKNKM
SVSQENIDSEGEQKSPSKLKKRTKGSAEKERGNAEEKERKESKASMVTSDPSKQDVDSDS
DEVPDILVQTAAAEHSSDEDVQQDADSNQGNKRVKKCLFKVSKKEEEEEQVGEEEEEEQV
GEEQEQVGEEQVGEEQVGEEEEEEQVGEEEGESDKEKTDKKPAAKRKLKADDSDNSESDS
DEDAKKKKKSSTASDKKTSKKKQKVSDGSSNSDLEKEMKGLRKLVTGKRRSSRVKKEREE
KENKGGDRRRSYELKRKARSRGAKQQDSSSDDDDEEEAEGGGSGEESGDQQKIKPIVEET
VVAGRETFHQSSGEEGNHDSSQMAVDDDDDDPENRIAKKMLLAQIKANYSSGAEESSDED
GEENEQGKGGEEEEEEEEEDDGDGEEEEEGDSGSDMDVKKSGGRRHRLLRHKLTLSEGES
GEEKEKPASKGKKETKRTRRKVGSDDSADLDSEESASSSESGVSEEISEEEEEESEEESE
EGSSRRRTTRSSKKKKKKKEERSYAQKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDTPK
GQRKKIRKILKDDKLRTETRDALKEEEERRRRIAEREQLREKLRETLHVPPDQVLVVEEA
SAVACPITTKLVLDEDEETKEPMVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKTNKNS
GSGCILAHCMGLGKTLQVVTLLHTLLLCDKLDFSTALIVCPLNTVLNWLNEFEKWQYGFK
DEESLEVTELATVKRPQERASALQQWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQK
TLVDPGPDFVICDEGHILKNEASAISKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIK
ENLLGSVKEFRNRFVNPIQNGQAADSTDQDVRIMKKRAHILYEMLNGCVQRRDYSALTKF
LPPKHEYVVSVRVTPIQCTLYRHYLEHLTGAGNVVEGGRGRAGTKLFQDFQMLSRIWTHP
WCLQLDYISKENKGYFDEDSMDEFIASETEESSMSMTSEDEKQKKKKKRGKARKKDSDSD
SDALEVIKEWNTSSRGGDPSSRNRAEPQEEVRPASSPGTRSPDWHKEFVTEADSEILEHS
GKMVLLFEILRMAEEVEDKVLVFSQSLISLDLIEDFLELAGRAKEEEKQFPYKGEGKWFR
NIDYYRLDGSTNALNRKKWAEEFNDTSNVRGRLFLISTRAGSLGINLIGANRVIIFDASW
NPSYDIQSIFRLYRFGQLKTCYVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHF
TMNELTELYAFEPDLLDDPTGKKSKRTTPMLPKDPFLAELLHSNKEQIVGYHEHDSLLDH
KEEEALSEEDRKAAWAEYEAEKKGLSLRVNHGAYGGQMDMGGANSYFPFNVAALASMSNP
QLEELINQGRQKVMEATNALKFLPRESLEDTIGRVWKENPALTESQVQAMALGRQASVEM
ELKRREAVYRDVLNKQQTLMMYVQKVITNRKVREQQMAMANQAQLMSQMNGMLGAGGMSQ
MELLGLYQQLGALQGHPTHPSMGGKNPGPSKGNL
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggcctcagctgaatctatagaccaagtgatggaggaggaagtaggtcagctt
ccgattacagaccagatggaggaggaggaggaggaggctgggagctcaacagagactgag
aagccctcctcttctcacaccaagaggaagccttctgttgcagccaaggaagttgggggg
aatgagtcagacacctcggacgagagtggacaggacgatggcgcctcagatgggacgttg
gttgtgcggcctcctgctgggactgacaacaaggaggacaagagcagaggagccatgacg
ctccgagtggacctctcacggagaaagacaggtcaaatgagtaaggcctcagctgaatct
acagaccaagtgatggaggaggaagtaggtcagcttccgattacagaccagatggaggag
gaggaggaggctgggagctcaacagagactgagaagccctcctcttctcacaccaagagg
aagccttctgttgcagccaaggaagttggagggaatgagtcagacacctcggacgagagt
ggacaggacgatggcgcctcagatgggacgttggttgtgcggcctcctgctgggactgac
aacaaggaggacaagagcagaggagccatgaagctccgagtggacctctcactgagaaag
acaggtcaaatgagtaaggcctcagctgaatctacagaccaagtgattgaggaggaagca
ggtcagcttccgattacagaccagatggaggaggaggctgggagctcaacagagactgag
aagccctcctcttctcacaccaagaggaagccttctgttgcagccaaggaagttggaggg
aatgagtcagacacctcggacgagagtggacaggacgatggcgcctcagatgggacgttg
gttgtgcggcctcctgctgggactgacaacaaggaggacaagagcagaggagccatgaag
ctccgagtggacctctcacggagaaagacagataccactttgcaggagaggatagactgc
accgcctgtggacagcaggtcaaccacttccagcgccactcggtgtttgagcacccgatg
ctccatgtgctcctctgcaagtcgtgttataagtattacaccagcgatgacatcaataaa
gacgaggacggcatggacgaacagtgcaggtggtgtgctgaaggtggaaacctgatctgc
tgtgactactgccacaacgccttctgtaagaagtgcatcctgcgtaacctggggcgcaag
gagctgtccatgatcaccgacgaggacagtaaatggtcctgctatatctgcagccctcag
cctctctcagacatcgcctccaactgctccaacatcttgaccaagctggagagcttctgg
cgcacgggacgcaagaaagagagggaggagaaagaggggaaggagaaagagaggaaggag
gtgaaagggcacagtaagggtaaaggtcaccaccaccatggtaaagctgtggtgaacggt
aaggaacattcggacgggtcagggaccctcaccttctcctataagaccctgaaggtcccc
aaggagctggtgaagaggaccaagaagctgattgagacgaccacagggctcaacaacacc
ttcatccatttcatccagcaggccgaggaggagcagggagcaggaggaggtggcagcggg
accagacacagacacctcaaggccttcaggtctgttctggctgatctgaagaaggcccat
gctgctctagagaaagacttggagtcacagttcacttcccaggaccaggggatgcagaat
ggggatgctgtttccaacactgatggccatgacggccacgatcagatagacaatgggcaa
gaggcagaagaggacaaaatggccgacactgaggatggggaggaggatgggggtgtgtca
gaggacacagagatggaggggagccccacccccacgcctcaggaccactcagagacaggc
agccaggctaaagaccagacagtggtgaaaatggaggaggaggaggatggaacagaggag
gaagctgaccgggataaagacatcgtgtccgtcgggccatccgtccctgacgagctcttc
cagatggtcaagagtttagcggactccaccgggttaacgcccggtaacgacgccacggaa
ctcacagcggctagccaatcggagaaccccgctgctcgttcaaccaggaagtcacatgac
acccagaaggagaaggccatgcccaaggttaagaacctcatcttgaagctgacgcctgtt
cccgtggttaccacacgcgcctccaggtctaagagtaaggatggagagaaggagaggagt
aaggatggagggaaggagaggagtaaggatggaggtaaggatggagggaaggagaggagt
aaggatggagggaaggagaggagtaaggatggaggtaaggatggagggaaggagaggagt
aaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaaggatggaggg
aaggagaggagtaaggatggagggaaggagaggagtaaggatggagggaaggagaggagt
aaggatggagggaaggagaggagtaaggatggagggaaggagaggagtaaggatggaggg
aaggagaggagtaaggatggaagtaaggatggagggaaggagaggagtaaggatggaggg
aaggagaggagtaaggatggagggaaggagaggagtaaggatggagggaaggagagggag
aggagtaaggatggagggaaggaggtggagggagatggggcttccgaggaggacagccga
tgctccagtcgcacaaagaccacacccctcaggaagtcaccggaggggaaaaacaagatg
tccgtctctcaggagaacatcgactcagaaggcgagcagaagagccccagcaagctgaag
aagagaaccaagggcagcgccgagaaagaacgggggaacgcggaggagaaggagcggaaa
gagagcaaggcctccatggtaacctctgacccttctaaacaggacgtggactcagattct
gatgaggttccagacatcctggttcagactgcagcggcggaacacagctcggacgaagat
gtgcagcaggacgccgacagtaaccagggcaacaagcgcgtcaagaagtgcctgttcaaa
gtgagcaagaaagaggaggaggaggagcaggtgggagaggaggaggaggaggagcaggtg
ggagaggagcaggagcaggtgggagaggagcaggtgggagaggagcaggtgggagaggag
gaggaggaggagcaggtgggagaggaggagggagagagtgacaaggagaagactgacaag
aagccggcggccaaacgcaaactgaaagccgacgactccgacaactcagagtctgactcc
gatgaagacgcaaagaagaaaaagaagtcctccacggcttctgacaagaagacatccaag
aagaagcagaaggtctcggacggctcctccaactcggacctggagaaggagatgaaggga
ctccgcaaactggtgacggggaaacggaggagcagccgtgtgaagaaggaaagagaggag
aaggagaacaagggcggagatcggaggcggtcgtacgaactgaaacgcaaagccagaagt
agaggagccaagcagcaagattcatcgtctgatgacgacgacgaggaggaggcggaggga
ggagggtctggagaggagagtggagaccagcagaagattaaacccatcgtggaggagacg
gtggtagcagggagggaaaccttccaccagtcctcaggagaagaaggtaaccatgactct
tctcagatggcggttgatgatgacgatgatgatccagaaaacaggattgccaagaagatg
ctgctggcccagatcaaggccaactactcttcaggagcagaggagagctctgacgaggac
ggagaagagaacgaacaggggaagggaggagaggaggaggaggaggaggaagaggaggat
gatggtgatggtgaggaggaggaggaaggggactctggctctgacatggatgtgaagaag
agtggggggcgtcggcaccggctgctccgccacaaactgacgctgagcgagggagagtca
ggagaggagaaagagaaaccagccagcaaggggaagaaggagaccaagaggaccaggcgg
aaagtgggcagtgatgactcagcagacttagactctgaggaatcggctagcagcagtgag
tcaggagttagtgaggagatcagtgaggaggaggaggaggagtcagaggaggagtcagag
gagggcagcagtcgcaggaggaccacgcgctcctccaagaagaagaagaagaagaaggag
gagaggagctacgcccagaagaagaaacgccgtcgcatcaaggttcaggactcttcatct
gacgagaagagcgggtcaggagaggacggctcggggaaggaggatggagacactcctaaa
ggacagaggaagaagatcagaaaaatcctcaaggacgacaagctgaggacggagacgagg
gatgccctgaaggaggaggaggagaggaggagacgcatcgctgagagggagcagctcagg
gagaaactcagagagactctacatgtccctcccgaccaggtactcgtggtggaggaggcg
tccgccgtggcttgtccaatcacaaccaagctggtgctggatgaagacgaggagaccaag
gagcccatggtgcaggttcaccgcaatctggtcacgaagctcaaaccacaccaggtcgac
ggggtccagttcatgtgggactgctgttgtgagtcggtgaagaaaaccaacaagaactct
ggttctggatgtatcctggctcactgtatgggtctgggaaaaacactgcaggtggtaacc
ctcctccacacactactgctgtgtgacaagttagacttctccacggctctgatcgtctgt
cctctcaacaccgttctcaactggctcaatgagtttgagaagtggcagtacggcttcaag
gacgaggagagtttagaggtgacggagctggccacggtgaagcgtcctcaggagagagcg
tctgctctgcagcagtggcaggaggatggaggaatcatgatcattggctatgagatgtac
cgtaacctcacacagggtagaaacatcaagagcaagaaactcaaagagaccttccagaag
actctggttgacccaggcccagactttgtgatctgtgatgagggccacatcttgaagaac
gaggcgtcggccatctctaaagccatgaactccatcaagacccgacggagagtggtgctc
accggcactccactgcagaacaacctcatagagtaccactgcatggtgaacttcatcaag
gagaacctgctggggtcagtgaaggagttcaggaaccgcttcgtcaaccccatccagaac
gggcaggcagcggactccacagaccaggatgtacgcatcatgaagaagagggcccacatc
ctctacgagatgctcaatggatgtgttcagagaagagactactctgccctgaccaagttc
ctgcctcctaaacatgagtacgttgtgtccgtcagagtcacgcccatccagtgtactcta
taccgacactacctggagcacttaacaggtgcggggaacgtggtggaggggggtcggggc
cgagccgggaccaaactgttccaggacttccagatgctcagcagaatctggacccatccc
tggtgcctgcagctggactacatcagcaaggaaaacaaggggtactttgacgaggacagc
atggacgagttcatcgcctcggagaccgaggagtcttccatgagcatgacctctgaagac
gagaaacagaaaaagaagaagaagcgggggaaggccaggaagaaggacagtgactcagac
agtgatgctctcgaggtgattaaggagtggaacaccagttcccgaggaggagacccctcc
agccgcaaccgggcggagccacaggaggaagtgcgcccagcttccagccctggcaccagg
agtcctgactggcacaaggagtttgttacggaggccgactctgagatcctggagcattct
gggaagatggtgctgctgtttgagatcctccgtatggccgaggaggtggaggacaaagtt
ctggtgttcagtcagtctctgatctctctggacctgattgaagacttcctggagctggct
ggccgagccaaagaggaggagaaacagtttccctacaaaggtgaggggaagtggttccgg
aacatagactactaccgcttggacggctccaccaatgccctgaaccgtaagaagtgggca
gaggagttcaatgacaccagcaacgtcagaggtcggttgttcctgatctcgaccagggct
ggttctctgggcatcaacctgataggagctaacagggtcatcatcttcgacgcgtcctgg
aatccgtcgtacgacatccagagtatcttcaggctctaccgcttcggacagctcaagacc
tgctacgtctaccgattcctggctcagggtactatggaagagaagatctatgaccgccag
gtggctaaacagtctctgtccttccgagtggtggatcaacagcagatagagagacatttc
accatgaatgagctgacggagctctacgcctttgaacctgaccttctggatgatcccact
ggcaagaagagcaagaggaccacgcctatgctgccaaaggaccccttcctagctgagctg
ctccacagcaataaggagcagattgtgggctatcatgaacatgactccctcctggatcac
aaggaagaggaggctctcagcgaggaggaccgcaaagcagcctgggccgagtacgaggcg
gagaagaagggtctgtctctgcgtgtgaaccatggagcgtacggaggacagatggacatg
ggaggagctaacagctacttccccttcaacgttgccgcactggcctctatgtccaaccct
cagctggaggagttgatcaaccagggccgtcagaaggtgatggaggccaccaacgctctc
aaattcctccccagagaatctctagaggacaccatcgggagagtgtggaaggagaaccca
gccctcacggagtcccaggtccaggccatggctctggggagacaggccagtgtagagatg
gagctcaaacgaagagaagctgtctacagagacgtcctcaataagcaacagactctaatg
atgtacgttcagaaggtgatcaccaacaggaaggtgagagagcagcagatggccatggcc
aaccaggcccagctgatgagccagatgaacggcatgctgggagctggagggatgagccag
atggaactcttggggttgtaccaacagctgggggcgctacagggtcatcccacccacccc
tccatgggcggcaagaaccccggtccctccaagggcaacctgtaa
DBGET
integrated database retrieval system
