Oncorhynchus keta (chum salmon): 118382482
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Entry
118382482 CDS
T09424
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118382482
04020 Calcium signaling pathway
118382482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118382482
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118382482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
Motif
Other DBs
NCBI-GeneID:
118382482
NCBI-ProteinID:
XP_052375970
LinkDB
All DBs
Position
5:28339291..28506549
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AA seq
2142 aa
AA seq
DB search
MCQMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFF
VFFIFGIIGVQLWAGLLRNRCYLEENFTLSSGLTLPAPYYQPEEDDERPFICSLAQDNGI
MSCGDVPARREGGRTCCLDREDAYHRQSLGLIPEPLVNSSASAVGLCINWNQYYTRCHTG
HNNPHKGAINFDNIVYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFIFLIIIGSFFM
INLCLVVIATQFSETKQREHQLMQEQRAQCLSSSTLASLHEPGDCYEELFQLVCHMLRKA
RRRSVALYNQLRGRPLPPPPTRGRGRGGGRGAGSANGGERNHLRQPRQSPCPHQNKLDPV
HSSQPLGNSIALAVPQNTEDCPQCAAALSLREGAGAVGDSANGEEEEGAVEETDREENHL
EEKVEEGEGVKKKRKRRSCFGHCKDMWDEMRKKLWGIVESKYFNRGIMIAILINTISMGI
EHHNQPEELTNVLEISNIVFTSMFTLEMILKLTAFGFFAYLRNPYNIFDGIIVIISVCEI
IGQSDGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSIL
GMHIFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTSPCAA
LYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSEDDRSSCNFDENSDKLKDSLHLS
DPKICTLTPNGHLDLSPTPTGLYTADRLTFALGSRKNSVISLGRANLEGRANLEGRALCR
GSSSLYHNWGRPASQTQAMWCRRSSWNSLGRPSRALGLGLGVGGGGSLRSRSPHATHPAE
QESLLSPPHPPPHLAHPPPLLALNFVPRRDRRALSLELPELLQVPGTPLASMLPYPRKKS
FSSGLVGAGAGGEHQDCNGKAPPAQLQLQLQLPPHPHPHPQLLTEVFPQVNTRKDREDLD
DDIDYSLCFRIQKMMEVYRPEWCETREDWSVFLFSPQNRFRRVCQSIIAYKMFDYVVLAF
IFSNCITVALERPKIMQGSLERVFLTISNYVFTAIFVAEMTLKVVSMGLYIGEQAYLKSS
WNVLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLIT
SLKPIGNIVLICCAFFIIFGILGVQLFKGKFFYCFGPDVKNITNKSDCLQANYKWVHHKY
NFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGVDQQPVINNSPWMLLYFISFLLIVSFF
VLNMFVGVVVENFHKCRQNQEVEEAKRREDKRRRRMEKKRRDAQKIPYYASYSSLRLWIH
TLCTTYYLDLFITFIICINVITMSLEHYSQPRSLDLVLKYCNYFFTSTFVLETLLKLTAF
GFRRFFKDRWNQLDLAIVLLSVMGITLEEIDYSASLPINPTIIRIMRVLRIARVLKLLKM
AKGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPCEGMSRHATF
ENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDYGPDYSCNPSLQFISPMYFVSFVLTAQ
FVLINVVVAVLMKHLDDSNKEAKEEAEMDAEIELELATGALCCMGPEGVCAGGKKGGGGG
VDRGMGVPGSSSGGNMQYHVATTHPGTLQDPNNRDPYSPAQESQWLDSVSLLIKDSFEGE
MLMIDNLSGSVFHHYSSTSSPVWKDCKSHPQLEQIRLAEIEQASLRSDQMSDKSSSPALP
DDLSLDDQSVHQLLVREGKEERGSDSQGSEEAGGGGDSLTQAQTGGSRHCRAHSSVAEEG
APLLVEVGVHQRHKTPSHHSPGGTSCSSTKAGEGSDEGGRGGGRVGAASASGSPALIRLP
AEFFHPVAAAALPAPPRAREGRPSRGLRLTSPASWSSLRSQGANSRVLCTQYPSHSDSSL
AKRSSDGSLQTTLEEGLSFSVSPPQDLVSPLPPLPLLCPPLPEDPTSCPPGQTLRPRPSP
SSGPALTLQATRGHQRSQSSGRGSISPGYTREDSIDPVPCDLEDLGIGISLSIGGCGSSQ
AGNSEHLSETLSSLSLTSLLSPASLAPSGVKKCNSTGSLNQGARRGEGRQILGLELDHQG
FLANPWGESGGGRGEEGQLGEAPDLKGKSSSQTTVGSCSKNR
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagatggtggagtactcgttggacctgcagaacatcaacctttcagccattagg
acagtcagggtcctcagacccctcaaagccatcaacagagtacccagtatgcgtatcctg
gtgaatctcctcctggacacactgcccatgctgggaaacgtcctcctgctttgtttcttc
gtcttcttcatctttggcatcatcggagtgcagctgtgggcgggattactgaggaaccga
tgctacctcgaggaaaacttcaccctttcgtcaggtctgaccctacccgctccttactac
cagccggaggaggatgacgagcgccccttcatctgctctctggcccaggataacgggatc
atgtcgtgtggtgacgtcccggcccggagggaggggggaaggacctgctgtctggacagg
gaggatgcctaccaccgccagtccctggggctcatccctgaaccactagtcaacagttca
gccagtgcagtgggtctctgtatcaactggaaccagtactatactagatgccatactgga
cataataatccacacaagggggcgatcaacttcgataacatcgtatatgcctggattgtt
atcttccaggtgatcaccctggaaggctgggtagagatcatgtactatgtaatggatgct
cactccttctacaacttcatctacttcatcttcctcatcatcattggctcgttcttcatg
atcaacctctgtctggtggtcatcgccacccagttcagtgagaccaagcagcgggagcac
cagctgatgcaggagcagcgggcccagtgcctgtcctcctctaccctggccagcctgcat
gaaccgggggactgctacgaagagctcttccagctggtctgccacatgctgcgcaaggcc
cgcaggaggtctgtagccctgtataaccaactgagaggaaggcctctgccaccaccgccc
actagagggagaggaagaggaggaggaagaggagcagggagtgcgaacggaggggaaagg
aatcacctgaggcagccacgccaatctccctgtcctcaccaaaacaagctggacccagtc
cacagctcccaacccctgggcaactccatcgccctggccgtccctcaaaacacagaggac
tgccctcagtgcgctgcggcactgtcactcagggagggggcgggagctgtgggcgactcg
gccaatggggaggaggaggagggggctgtggaggagacggacagggaggagaaccacttg
gaggagaaagtggaagagggggagggagtgaagaagaagaggaagaggaggtcgtgtttt
ggacactgtaaggacatgtgggatgagatgaggaagaaactttggggcatcgtggagagc
aaatacttcaatagaggaatcatgatcgctattctcatcaatactatcagcatggggata
gaacatcacaaccagccggaggagctgactaacgtgttggagatcagtaacattgtgttc
accagtatgttcaccctggaaatgatcctcaagctgaccgcctttggcttcttcgcctac
ctgaggaacccctacaacatctttgacggcatcatcgtcatcatcagtgtgtgtgagatc
ataggtcagtctgatggaggtctgtctgtcctgaggaccttcagactgttgagggtgatc
aagctggtgcgcttcatgccagcgctacgcagacagttggtggtgctgatgaagaccatg
gacaacgtggccaccttctgcatgctcctcatgcttttcatattcatcttcagtatcctg
gggatgcacatctttggctgtaagttcagtctgaagacagacactggagacactgttcct
gacaggaagaactttgactctctactgtgggccattgtcactgtgtttcagattctgact
caggaagactggaacatggtgctgtataatggaatggcctccacctctccctgtgctgct
ctctactttgtggctctaatgacctttggcaactacgtcctcttcaacctgctggtggcc
atcttggtagagggctttcaggctgagggggatgccaaccggtcgtactccgaagacgac
aggtcctcatgtaactttgacgagaactctgacaagctgaaggactctcttcatctctct
gaccctaagatctgcaccctaacccccaacggtcacctggacctgtccccaacgcccacg
ggtctgtacacggccgacaggctcactttcgctctgggctcacgcaaaaacagtgtcatc
tctctgggcagggctaacctggagggcagggctaacctggagggcagggctctgtgtcgg
gggagcagctccctgtaccacaactggggccgccctgcctcccagacccaggcaatgtgg
tgccggcggtccagctggaatagcctgggtcgcccctcccgagccttgggcctgggattg
ggggtaggaggagggggtagcctgcgctcccgcagcccccacgccacccacccggccgag
caggagtccctcctctccccccctcaccctcctccacacctcgcccaccctcctcccctc
ctggccctaaactttgtcccgcggcgggaccgccgagcgctgtccttggagctgccggag
ctcctccaggtcccggggacccccctggcgtcaatgctgccttaccccaggaagaagagc
ttctccagtgggttggttggtgcaggggctgggggggagcaccaggactgcaatgggaag
gccccaccagcccagctccagcttcaacttcagctaccgccacatccacatccacatcca
cagctactgacagaggtgttccctcaggtcaacacacgcaaggacagagaggacctggac
gatgacattgactatagtctgtgtttccgtatccagaagatgatggaggtgtacaggcca
gagtggtgtgagaccagagaggactggtctgtcttcctcttctctcctcagaacaggttc
aggcgggtatgccagtccatcatagcctacaagatgtttgactatgtggtgctagcgttc
atcttctccaactgcatcaccgtggctctggagagacccaagatcatgcagggcagcctg
gaaagagtcttcctaaccatctccaactacgtcttcacagccatctttgtagcagagatg
acgctcaaggtggtgtctatgggcctgtatataggggaacaggcatatctgaaaagcagc
tggaacgtgttggacggcttcctggtctttgtgtcgttgattgacattgtggtgtcaatg
gcgggcggggctaagattctgggggtgctgagagttctcagattgctccgcacactgcgc
cccctcagggtgatcagtcgagccccaggtctgaagctggtagtggagactctaataacg
tctctgaaacctataggaaacattgtccttatctgctgtgctttcttcatcatatttggt
atcctgggggtgcagctgttcaaagggaagttcttctactgctttggccccgacgtcaag
aacatcaccaacaagtctgactgtctgcaggccaactacaaatgggttcatcacaagtac
aactttgacaacctgggacaggctctgatgtccctgtttgtgctggcttcaaaggacggt
tgggtgaacatcatgtaccatggcctggatgctgttggggtggaccaacagccagtgatc
aacaacagtccatggatgctcctctacttcatctccttcctcctcatcgtcagtttcttc
gttctgaacatgtttgtgggcgtggtagtggagaacttccacaagtgccgtcagaaccag
gaagtggaagaggctaaaaggagagaggataaacgacggagacgcatggagaagaagagg
agggacgcccagaagatcccctactatgccagctacagctccctccgcctgtggatccac
actctgtgtaccacctactacctggacctcttcatcaccttcatcatctgtatcaacgtc
atcaccatgtcactggaacactacagccagccacgatctctggatctagtgttgaagtac
tgtaactatttcttcacatccacctttgtactggagaccctcctgaagctcaccgccttt
ggcttccgacgcttctttaaggacaggtggaatcagttggatctggccatcgtgttgctg
tcagtgatgggcatcactctggaggagatcgactacagcgcttctctccccatcaaccct
accatcatacgcatcatgagggtgttgaggatcgcaagagttctgaagctgctgaagatg
gctaaaggaatgagagctctgctggatacagtggtccaagccctaccacaggtggggaac
ctgggcctgctcttcatgctcctgttcttcatctatgcagcactgggggttgagctgttt
ggagaactggtgtgtaacgaggactacccatgtgaggggatgagccgccatgctaccttt
gagaactttggcatggccttcctcactctgttccaggtctccactggggacaactggaat
gggatcatgaaggacacgttgagggagtgccctccggactacgggcctgactactcctgc
aaccccagcctgcagttcatctctcccatgtactttgtgtcctttgtgttgacggcccag
ttcgtcctgattaacgtggtggtggcggtgttgatgaagcacctggacgactccaacaag
gaggccaaggaggaggcggagatggacgctgagattgagctggagctggccacgggggcc
ctatgctgcatggggccggagggagtctgtgcaggagggaaaaaaggtggaggaggagga
gtggatagagggatgggagtcccaggcagttcctccggggggaatatgcaatatcacgtg
gcaacgacgcatccaggaacactgcaagatccgaacaatcgggatccctactctcctgca
caggagagtcagtggctggacagtgtgtctctgctgattaaggactcatttgaaggagag
atgctgatgattgacaacctctctggatctgtcttccatcactactcttctacctcttct
cctgtctggaaggactgtaagagccacccacaactagagcagatccggctggcagagata
gagcaggcatctctgaggtcagaccaaatgtcagacaagtcgtcgtctccggccctacct
gatgacctcagcctggacgaccagagtgtccaccagctgctggtgcgggagggaaaggag
gagaggggcagtgactcccagggctcagaggaggctggcggaggaggggactccttgacc
caggcccagacaggggggtcgaggcactgcagggcccacagttcagtagccgaggagggg
gctccactcctggtggaggtgggggtccatcagagacacaagaccccatcccaccacagc
cctggtggcacctcctgtagtagcactaaggcaggagaaggatcagatgagggaggaaga
ggaggaggaagagtaggagcggccagtgcctctggttctcctgctcttatccgtctgcca
gcggagttcttccaccccgtggcagcagcggccctgccggcgccccccagggccagagaa
gggcgcccctcacggggcctcagactcacctccccggcctcctggtcctccctgcgctcc
caaggagccaacagccgggtgctctgcacgcagtacccgtcccatagtgactcgtctctg
gccaagaggagctccgatggcagcctccagaccaccctagaggaaggactcagcttcagt
gtttcgccccctcaagacctggtgtcccccctccctcctcttcccctgctctgccccccg
ctccctgaggaccccaccagctgccccccaggccagactctgagaccgcggcccagcccc
tcgtcaggccctgccctcaccctccaggccactcggggccaccagcggagccagagcagc
ggcaggggtagcatcagccccggctacacccgggaagactccatagaccctgttccatgt
gacctggaggacctgggcatcgggatcagtttgtctatcggggggtgtggctccagccag
gcgggcaacagcgaacacttgtcggagacgctaagcagtctgtcgctcacatcgttgctc
tcacccgcctccctggcaccgtcgggggtgaagaaatgcaacagcactgggagcttgaat
cagggggcgaggaggggggaggggagacagatcctagggttggagttggaccaccagggc
ttcctggccaacccttggggagagagtgggggaggcagaggagaggagggacagttggga
gaggcaccggacctcaaggggaaaagctcaagccaaacaacagtagggtcctgtagtaaa
aacagatga
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integrated database retrieval system
