Oncorhynchus keta (chum salmon): 118382503
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Entry
118382503 CDS
T09424
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118382503 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118382503 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118382503 (zgc:136908)
03009 Ribosome biogenesis [BR:
oke03009
]
118382503 (zgc:136908)
04131 Membrane trafficking [BR:
oke04131
]
118382503 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118382503 (zgc:136908)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118382503 (zgc:136908)
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
118382503 (zgc:136908)
Membrane trafficking [BR:
oke04131
]
SNARE
SNARE associated proteins
Others
118382503 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118382503 (zgc:136908)
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118382503 (zgc:136908)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_22
AAA_33
AAA_2
TIP49
AAA_14
RNA_helicase
NPHP3_N
AAA_28
nSTAND3
ATPase
AAA_17
Mg_chelatase
Vps4_C
Parvo_NS1
ATPase_2
AAA_18
AAA_7
ABC_tran
ResIII
DUF815
IstB_IS21
AAA_24
NB-ARC
SLFN-g3_helicase
Viral_helicase1
NACHT
nSTAND_NTPase5
Zot
Motif
Other DBs
NCBI-GeneID:
118382503
NCBI-ProteinID:
XP_052384336
LinkDB
All DBs
Position
10:complement(80277007..80320521)
Genome browser
AA seq
802 aa
AA seq
DB search
MPAPGGTDPKGEDFSTAILKQKHRPNRLVVDEAHNEDNSIVSLSQAKTEELQLFRGDTVV
LRGRKRRETVCIVLTDDTCPDERVRMNRITRNNLRVRLGDVISVHACPDVKYGVRIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPAPHCIVSP
DTVIHCEGQPINREDEEESLTDVGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP
AIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRTHVIVMAATNRPNSIDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSDDVDLERVSMDAHGHVGSDLAALCSEA
ALQAIRKKMTLIDLEDDTIDAELLNSLAVTNDDFRWALGQSNPSALRETVVEVPNVNWED
IGGLGEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSNKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDTASRTAILN
ANLRKSPIARDVDLAYLSGITQGFSGADLTEICQRACKLAIREAIEAEIKAERQRQTHPG
TAMDEDCDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSGSQ
SGGQGSGAGGQFRDEVEDDLYQ
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccctggaggaacagatcctaagggggaggatttctccactgctatcctgaag
cagaaacacagacccaatagactggtggtggatgaagcccacaatgaagacaacagcatc
gtcagcctctcacaggcgaagacagaggagctgcagttgttccgtggcgacacggtggtc
ctgcgggggaggaagcggcgtgagacggtgtgtatcgtgttgacagacgacacctgtcca
gacgaacgcgtccgcatgaaccgcatcacacgcaacaacctgagggtacgcctcggtgat
gtcatcagtgtccatgcatgcccagatgtgaagtacggcgtgcgtatccatgtcctgccg
atagatgacaccatcgaagggttaacgggaaacctgttcgacgtcttcctgaaaccctat
ttcttggaagcatatcggcctgtacacaaaggcgacatcttcctggtgcgagggggcatg
cgggctgtggagttcaaggtggtggagacagaccccgccccccactgcattgtctccccg
gataccgtcatccactgcgagggacagccaatcaacagagaggacgaggaggagagtctg
actgacgtaggctatgatgacattggaggttgtcgtaaacagttagctcaaatcaaagaa
atggtggagcttcccctcagacatcctggactattcaaggctataggagtcaagcctccc
aggggtattctgctgtatggacctccaggtacagggaagacactggtcgcccgggccgtc
gccaacgagactggagcattcttcttcctcatcaatggtcctgagatcatgagtaagatg
gccggggagtcagagagcaacctgaggaaagccttcgaggaggcagagaaaaactctccc
gccattatcttcatagatgaactggattctatcgcgcctaagagagagaagacccatggg
gaggtggagaggcgtatcgtatcacagctcctcaccctgatggatggactgaagcagaga
actcacgttatcgtcatggcagccaccaacagacccaacagcatcgaccctgccctgaga
cgcttcggcaggtttgacagagagatcgacattggcatcccagactccactggtagactg
gagatactgcagattcacaccaagaacatgaagctatctgacgacgtggacctggagagg
gtttccatggatgcgcatggccatgtgggttcagacctggcagctctgtgttctgaggcg
gctctgcaggccatcaggaagaagatgaccctgattgacctggaggacgacaccattgat
gctgaactgctcaactcactggcagttaccaacgatgacttcaggtgggcgttggggcag
agtaacccgtcagctctgagggagacagtagtggaggttcctaatgttaactgggaggat
ataggaggactgggagaggtcaagagagaactgcaggaactagtacagtaccccgtggag
tacccagataagttcctgaagttcggtatgaccccgtcacgaggagtgttattctatgga
cccccaggctgtggaaagaccctgctagccaaggcgattgctaatgagtgccaggccaac
ttcatctccatcaagggacctgagctgctcaccatgtggttcggcgagtcagaggctaat
gtcagggacgtcttcgacaaggccagacaggcggccccctgtatcctgttctttgacgag
ctggactccattgccaagtccagagggggcggagccggggacgcagggggcgcggccgac
agggtcatcaaccagatcctcacggagatggacggaatgtccaacaagaagaacgtcttt
attataggagctaccaacagacctgatataatagactctgctatcctccgtccagggagg
ctggatcagctcatctacatccctctaccagacacagcctcccgtaccgccatcctcaac
gcaaacctacgcaagtcccccatcgccagagatgtagacctggcctacctgtctggtatc
acccagggttttagtggggcagacctgacagagatctgccagagggcctgtaagctggcc
atcagagaggccatagaggctgagatcaaagcagagcgccagagacagacccacccaggc
accgccatggatgaggactgtgaccctgttccagagatcaggaaggatcactttgaagag
gccatgaggttcgcccggcgctccgtcagcgacaacgatatcaggaagtatgagatgttc
gcccagacactacagcagagcagaggctttgggaacttcaggttcccctctggctctcag
tccggaggtcaagggtcgggggcaggggggcagttcagagacgaggtagaggacgacctc
taccagtga
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integrated database retrieval system
