KEGG   Oncorhynchus keta (chum salmon): 118382517
Entry
118382517         CDS       T09424                                 
Symbol
ercc5
Name
(RefSeq) DNA excision repair protein ERCC-5 homolog
  KO
K10846  DNA excision repair protein ERCC-5
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    118382517 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oke03400]
    118382517 (ercc5)
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     118382517 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2
Other DBs
NCBI-GeneID: 118382517
NCBI-ProteinID: XP_052361806
LinkDB
Position
Unknown
AA seq 1040 aa
MGVHGLWKLLETTGKPINPETLEGKILAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFH
RLCKLLYFRIRPVFVFDGDAPLIKKQTLTIRRQRKEEKTMESKQTNDKLLKTFLKRQAIK
AALGERSQDHLPSLSAVRREEDMFMLPALPAQEEERERSSSEEEEEQEEEDSHHIYQGDF
YEDSNSVDINSEEFSAMPPEVKHEILKDMKEFSKRRRTMYHTPPERSGDFSQYQLAGLLQ
RNKLNVRLEGVEREMSNRSAGNAPGVELCNQGEGHSVETRRLLSEDSTHYILIKGPKKTD
NSERVPDIQPAASPWLGGPLSGRVRTGGGERPEPLWRPISEEESLEEGPSSSSKHPQDPN
PRLGDTAPISPRTLKAIQAAMDSSFSDEEEKDSSWGRGGSRAEEEEGGGSVSPRTLLAIQ
RATGEELDVGPSPNATTIGSSPVKPHPPSPQRPANRLFVISSSEEETEGKDTPPRTTLTN
EDRLGVEKGDEQQSPLPLRLPIPPADSVLLSMEEETVTRRSREEEILRRSREEENLRRNR
EEENLRRNREEEILRRNREELEQAMDNRNRAFRSAVGQGDSLGQALCLIPPSGLGLNREE
GTGRSSPVTGPLPPSQEERNTREERNGQILKMEDGKEHSEQDSDSESFVDVSEGEELKEE
ETDDSLIEVGGGTPAKAQEDMAKKEEEALSSRAIPLEEREEEPQPPTEPSPAPPAPASVP
LPNEWEDINVDELVALESSLGEQQSRLREQKQQQERIAATVTGQMCLESQELLRLFGVPF
LVAPGEAEAQCAALDRTDQTHGTITDDSDVWLFGGRHVYKNFFSQNKYLEYYQYVDLQNQ
LGVDRTKLINLAYLLGSDYTEGVPGVGYVTGMEILNEFPGPGTEPVSMFSEWWSLAQQQQ
RLTSDPRDSKVKRKLRGLRLWPGFPNPAVATAYLQPSVDLSESSFSWGRPHLDLLKEFCE
SRFGWNSRKTEETLHPVIKQLNTQQTQLRIDSFFRLEQQERQAIKSQRLRRAVTCIKRKE
REDGGREEEEEEGTGSPIQG
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgggggtacacgggctgtggaagctgcttgagaccaccgggaagcccatcaaccccgag
acgctcgagggcaagatcctggctgtcgacatcagtatctggttgaaccaggcagtgaag
ggtgtgagagacagggagggtaacagtgtccagaacgcccacctcctcaccctgttccat
cgtctttgtaaattgctctatttccgcatcagacctgtcttcgtgttcgatggagacgca
cctctgatcaagaaacagaccctgaccatcagaagacagagaaaggaggagaagactatg
gagtccaagcagaccaatgacaaactcctcaagaccttcctgaagagacaagccatcaaa
gctgctctgggagagaggagtcaggatcatctgcccagcctgtctgctgtgaggagagag
gaggacatgttcatgctgcctgccctgccagcccaggaggaggagagagagaggagcagc
tcagaggaggaggaggagcaggaggaggaggacagccatcacatctaccagggggatttc
tatgaagactctaactctgtggacatcaactctgaggagttttctgccatgcctcctgag
gtgaaacatgagatccttaaagacatgaaggaattcagcaagagacgacgcaccatgtac
cacaccccccctgagcggtcaggggacttctcccagtaccagctagcagggctgctgcag
aggaacaagctgaacgtgcgtctggagggggtggagagagagatgtccaaccgtagtgct
gggaacgccccgggggtggagctatgcaaccagggggaggggcacagcgtggagacacga
cgcctcctctcagaagactccacccactacatcctcatcaaaggtccaaagaagaccgac
aacagtgagagggtgccagacatccagcctgcggcctctccctggttgggtggtccccta
tcagggagggttaggacggggggaggggagagacctgagcccctttggagacccatctcg
gaggaggagagcctggaggagggaccctcatcatcgtctaaacatccccaggacccgaac
ccaaggctgggggatacagcacccatctccccccggacactgaaggccatccaggctgcc
atggatagcagcttctcagacgaggaggagaaggatagctcctggggtagaggagggagt
agggctgaggaggaggaggggggtggcagtgtgtctcctcgtaccctcctggccattcag
cgagccacgggagaagagttggacgtaggcccgtccccaaacgccactacgattggcagt
tctcctgttaagccccaccctcccagtccccagcgtcctgccaaccgattgttcgtcatc
agcagctcagaggaggagactgaagggaaggacacgcccccgaggacaactctgaccaat
gaggacaggcttggggtggagaagggggatgagcaacagtcgcctctcccccttcgcctc
cccattcctcctgcggacagtgtgctcctcagcatggaggaggaaaccgtcaccaggagg
agcagggaggaggagattctgaggaggagcagggaggaggagaatctgaggaggaacagg
gaggaggagaatctgaggaggaacagagaggaggagattctgaggaggaacagagaggag
ttggagcaagccatggacaacaggaacagagctttccgctctgcagtgggtcagggggac
agtttgggtcaggctctctgtcttattcccccatcaggccttggtctaaacagagaggag
gggactgggaggagcagcccagtgactgggcctttacctccatcgcaggaggagaggaac
accagggaggagaggaatggacagattctgaagatggaggacggcaaggagcacagtgag
caggacagtgattcagagagcttcgttgacgtgtctgagggggaggagctaaaggaggag
gagacggatgattcgctgatagaggttgggggcggtactccagctaaggcacaggaagac
atggccaagaaggaggaagaggctttaagtagcagagctatccctttggaagagagggag
gaggagccccagcctcccacagagcccagcccagctcctcctgccccagcgtctgttcct
ctacccaacgagtgggaagacatcaacgtggatgagctggtggcgctagagagcagtctt
ggagagcagcagtccaggctgagggaacagaagcagcagcaggaacgcatcgctgccacg
gttaccggacagatgtgtctggagagccaggagctgctgaggttgtttggcgtacccttc
ctggtggctcccggtgaggccgaggcccagtgtgcagccctggaccggaccgaccagacc
cacggaacaatcaccgatgacagcgacgtctggctgttcggaggacgacacgtctacaag
aacttcttcagccagaacaaatacctagaatactaccagtacgtagatctacagaaccaa
ctgggcgtggaccgtaccaagctgattaacctggcctacctgctgggtagtgactatacg
gagggagtcccgggggtgggctatgtgacgggcatggagatactcaacgagttccccgga
cctggcacggaaccagtcagcatgttcagtgagtggtggtccttggcccagcagcagcaa
cgtctgacctctgacccccgtgactccaaggtcaagaggaaactgagagggcttcggctg
tggccgggcttccccaaccctgccgtggcaactgcctacctgcagcccagcgtcgaccta
tcagaaagctcctttagctggggccgcccacacctcgacctcctcaaggaattctgtgag
agtcgttttggttggaacagcaggaagacagaagagactctacatcctgttatcaaacag
ctcaacacacaacagacccagctgcgtatcgactcgttcttccgtctggagcagcaggag
agacaggccatcaagagccagcgcctccgccgggccgttacctgtataaagaggaaagag
agggaggacggagggagagaagaggaagaagaagaggggactggctcccccatccaaggc
taa

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