Oncorhynchus keta (chum salmon): 118382564 Help Entry 118382564         CDS       T09424                                  Symbol actn1 Name (RefSeq) alpha-actinin-1 isoform X1   KO K05699   actinin alpha 1/4 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04510   Focal adhesion oke04520   Adherens junction oke04530   Tight junction oke04810   Regulation of actin cytoskeleton Brite KEGG Orthology (KO) [BR:oke00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     118382564 (actn1)    04520 Adherens junction     118382564 (actn1)    04530 Tight junction     118382564 (actn1)   09142 Cell motility    04810 Regulation of actin cytoskeleton     118382564 (actn1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oke04131]     118382564 (actn1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:oke04812]     118382564 (actn1)    04147 Exosome [BR:oke04147]     118382564 (actn1) Membrane trafficking [BR:oke04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     118382564 (actn1) Cytoskeleton proteins [BR:oke04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      118382564 (actn1) Exosome [BR:oke04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    118382564 (actn1)   Exosomal proteins of colorectal cancer cells    118382564 (actn1)   Exosomal proteins of bladder cancer cells    118382564 (actn1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_7 EF-hand_6 EF-hand_8 EF-hand_5 Motif Other DBs NCBI-GeneID:  118382564 NCBI-ProteinID:  XP_052341453 LinkDB All DBs Position 29:complement(1557048..1671095) Genome browser AA seq 1135 aa AA seqDB search MPTFDMDPYDGDENDYMPQEDDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIE EDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALHYITSKGVKLVSIGAEEIV DGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDG LGFCALIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEK AIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPW LENRAPENTMQAMQQKLEDFRDYRRQHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPS EGKMVSDVSNAWGGLEAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKEEML QARDFETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSLSVNSRCQ RTCDRWDALGALTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFI VHTIEEIQVSTVEEIQVSTVEEIQVSTVEEIQVSTVEEIQVSTVEEIQVSTVEEIQVSTV EEIQVSTVEEIQVSTIEEIQVSTIEEIQVSTIEEIQVSTIEEIQVSTIEEIQVSTIEEIQ VSTVEEIQVSTVEEIQVSTVEEIQVSTIEEIQVSTVEEIQVSTVEEIQVSTVEEIQVSTV EEIQVSTIEEIQVSTIEEIQVSTVEEIQVSTIEEIQVSTVEEIQVSTVEEIQVSTIEEIQ VSTIEEIQGLSTAHEQFKATLPDADKERGAILGIHSEIAKIVATYHVNMAGTNPYTTINP QDINAKWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRIS IEMHGTLEDQLTHLRQYEKNIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGW EQLLTTIARTINEIENQILTRDAKGISQDQMNEFRASFNHFDRDHSGTLGAEEFKACLIS LGFDIANDAQGEAEFSRIMSIVDPNRVGVVTFQAFIDFMSRETADTDTADQVMASFKVLA GDKNFIMADELRRELPPDQAEYCIARMAPYSGTDAVPGALDYMSFSTALYGESDL NT seq 3408 nt NT seq  +upstreamnt  +downstreamnt atgcctactttcgacatggacccgtatgacggagatgaaaacgattatatgcctcaggaa gatgactgggaccgggatatgctgttggacccggcgtgggagaagcagcagagaaagacg ttcacggcctggtgcaactcccacctgaggaaagcaggaacgcagatcgagaacatcgag gaggacttcagggacggactgaaactcatgctgctgcttgaggtcatatcaggagagcgc ttggccaaaccagagagagggaagatgagagttcacaagatctccaacgtcaacaaagct ctccactacatcaccagtaaaggagtcaagctggtgtccatcggagctgaggagatcgtc gacggcaacgctaaaatgaccctgggaatgatctggaccataatccttcgcttcgccatc caggacatctctgtggaagaaacatcagctaaagagggtcttcttctgtggtgccagagg aagactgctccttacaagaacgtcaacattcagaactttcacattagctggaaagatggg ttgggattctgtgctctcattcacagacaccgtccagagctcattgactatggcaagcta cgcaaggatgaccccatgaccaacctgaacacagcctttgacgtggcagagaagtacctg gacattcccaagatgttggacgctgaggatatcgtgggcacggcccgcccggatgagaag gccatcatgacctacgtatctagcttctaccacgccttctctggtgctcaaaaggcggag acggcggccaataggatctgcaaggtgttggctgtcaaccaggagaatgagcagctgatg gaggactacgagaagctggctagtgacctcttggagtggatccggcgcaccatcccgtgg ctggagaaccgtgctccagagaacaccatgcaggcgatgcagcagaagctggaggacttc agggactatcggcgtcaacacaaacccccaaaggtccaggagaagtgccagctggagatc aacttcaacaccctgcagaccaagctgaggctgagcaacaggcctgccttcatgccctct gaggggaagatggtgtcggacgtgtctaacgcgtggggcggcctggaggcggagaagggt tatgaggagtggctccttaacgagatacgtcggctggagagactcgaccacctggcggag aagttccgtcagaaagcagccatccacgaagcctggacggaaggtaaggaggagatgctg caggcgcgggactttgagacggcctctctgtctgagatcaaggctctgctgaagaaacac gaggccttcgagagcgacctggccgcgcaccaggaccgcgtagagcagatagctgccatc gctcaggagttaaatgagctagactactatgactccctcagtgtgaacagtcgatgccag aggacatgtgaccgatgggacgccctaggagccctgacccagaaacgcagcgaagctctg cagagaactgagaagcttctggagaccatagaccagttgtatctggagtttgccaagcga gctgctccgttcaacaactggatggagggagccatggaagatctgcaggacacgttcata gttcacaccatagaggagatacaggttagtactgtagaggagatacaggttagtactgta gaggagatacaggttagtactgtagaggagatacaggttagtaccgtagaggagatacag gttagtaccgtagaggagatacaggttagtaccgtagaggagatacaggttagtactgta gaggagatacaggttagtactgtagaggagatacaggttagtaccatagaggagatacag gttagtaccatagaggagatacaggttagtaccatagaggagatacaggttagtaccata gaggagatacaggttagtaccatagaggagatacaggttagtaccatagaggagatacag gttagtaccgtagaggagatacaggttagtactgtagaggagatacaggttagtaccgta gaggagatacaggttagtaccatagaggagatacaggttagtactgtagaggagatacag gttagtactgtagaggagatacaggttagtaccgtagaggagatacaggttagtaccgta gaggagatacaggttagtaccatagaggagatacaggttagtaccatagaggagatacag gttagtactgtagaggagatacaggttagtaccatagaggagatacaggttagtaccgta gaggagatacaggttagtaccgtagaggagatacaggttagtaccatagaggagatacag gttagtaccatagaggagatacagggtctgagtacagcccacgagcagtttaaagccact ctccctgatgcggataaggaacgcggtgccatcctgggcattcacagtgagatcgccaag atagtggccacctatcatgtgaacatggctggtaccaacccttacaccaccatcaaccct caggacatcaacgccaaatgggacaaggtgagacagctggttccccagagggaccaggct ctgatcgaagagcacgcccggcagcagaacaacgagcgtctccgcaggcagttcgccaac caagccaacgtcatcgggccctggatccagaccaagatggaggagattggtcgtatctcc atcgagatgcacggaaccctggaggatcagctgacccacctccgccaatacgagaagaac atcgtcaactacaagccaaagatcgaccaattggagggagaccaccaactgattcaggaa gctctcatcttcgacaacaagcacaccaactacaccatggagcatatccgtgtgggctgg gagcagctcttgaccaccatcgccagaaccatcaacgagatcgagaaccagattctgacg cgggacgccaagggcatcagccaggaccagatgaacgagttcagagcctccttcaaccac ttcgacagggaccactcgggcactctgggggctgaggagttcaaggcctgcctgatcagt ctgggctttgatatcgccaacgatgcacagggtgaagcggagttctctcgcatcatgagc atcgtggatcccaaccgggtgggcgtggtcacgttccaggcctttattgatttcatgtcc cgagagacggccgatactgacaccgctgaccaggtcatggcctccttcaaggtcctggct ggggacaagaacttcatcatggctgatgagcttcgtcgtgagttgcctcctgatcaggca gagtactgcatcgcccgcatggcgccctactccggcaccgacgccgtccccggcgccctg gactacatgtccttctccaccgcactctacggagagagtgacctctga

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