Oncorhynchus keta (chum salmon): 118382566
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Entry
118382566 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: dynactin subunit 1-like
KO
K04648
dynactin 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04814
Motor proteins
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118382566
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118382566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118382566
03036 Chromosome and associated proteins [BR:
oke03036
]
118382566
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118382566
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
118382566
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
118382566
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
118382566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
118382566
NCBI-ProteinID:
XP_052351943
LinkDB
All DBs
Position
35:complement(3289153..3555675)
Genome browser
AA seq
1292 aa
AA seq
DB search
MSSQTTRRNVYTRTTSSGSSRMSSDGGGRPAKVGSRVEVIGKGHRGTVAYIGATLFSTGK
WVGVILDESKGKNDGTVQGKRYFTCHENHGIFVRQSQIQLVDDGADTTSPDTPEPASNKV
PKHEILETLKSAKLQRGPKPKKVVHASRTSSTPAPRKTTARRPKPSRPAGTGASKAGPSG
SVSASAGEMSSSEPSTPAQTPLGAPIIPSPGGLLSPSAPPPPLPSKEEESLRGQVKDLEE
KLETLRMKRTEDKVKLKELEKHKIQLEQLQEWKTKMQEQQNDLQKQLKEAKKEAKEAQEA
KEHYMEEMADTADAIEMATLDKEMAEERAESLQQEVESLKEKLEELVMDLEILKHEIEEK
GSDGAASSYHVKQLEEQTHTHLQACVRMRDLSVSEKQEHVKXQKQTERKSTELDTLRTQR
EKLQEEMKLAERTIDELKEQVDGALGAEEMVETLTERNLDLEEKVRELRETVVDLEAINE
MNDELQENARETELELREMLDLGGGRVREAEKRVEAAQETVADYQQTIKKYRELTAHLQE
VNRELTSQQEATAEQQQQPPPEMFDFKIKFAETKAYAKAIEMELRKMEVGQANRQVSLLT
SFMPDSFLRHGGDHDCILVLLLIPRLIFKAELISKQAQEKFDLNDNCVERSGMRGTAGEQ
LSFAAGLIYSLSLLQATLHKYEQALNQCSVEVYQKIGTLYPEMGVHERSLDFLIDLLHKD
QLDETVHVAPLTKAIKYYQHLYSIHLAEQTEDCTMHLADHIRFTQSALDCMCVEVGRLRA
FLHTGQEKTDLAVLLKDLETSCSDIRQFCKKIRRRMPGTDVPGIPAALTFLQQVADILLD
CRKHLTWVVAVLQEVAAAGAQMVAHLGEQEGLSALKLEDVAFKAGEQIYGTQGSNPYGCL
RQSCCIVIATMNKMATAMQEGEIDPSAPSQTLPPVELRATALRAEITDAEGLGMKLEDRD
TVIKELKKSLKFKGEELSEASVRLSLLEKKLDSSSRDADERVEKIQTQLDETQTLLKKKE
KEFEETMDALQADIDQLESEKADLKQRLNSQSKMTMDGLRGAPASGIASIVTGMTGATMA
SMGPGMGPGMGPGMGPGSGVPVIDSPLLTQQIEAQRHSIKHLKNENNRLKAEKMRAQLSS
LPPLHVSKLPTRDGSHPEVLSSALYRKTDQLLDTLLQMSANVKVVDITGKSPVTPSAQLL
EHTARLQSLSNTLDRLKDEVSEHVVTQRPGARALSDFATFPCSSFVKVQEEKRGDMVLVG
KVMMPCSRGQEQVHRLVLSQSQLQRVHRLLLT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcagactactaggaggaatgtatacacccggaccaccagtagtggcagcagc
aggatgagttcagacgggggtggccggccggccaaggtgggttcccgggtggaggtgatt
ggaaaggggcaccgcggaactgtggcatatatcggtgcaacgctcttctccacagggaag
tgggtgggagtgatcctcgacgagtcgaaggggaagaacgatggcacagtccaggggaag
agatacttcacctgccatgagaaccatggcatcttcgtacggcagtcacagatccaactg
gttgatgatggagcagacaccacctctcctgacaccccagaaccggcctccaacaaggtc
cccaaacacgagatcctggagacactcaagtctgctaaactgcagcgaggacccaagccc
aaaaaggtggtgcacgcttctcgaacctcctcgactcctgcccccaggaagactacggcc
agaaggcccaagcccagccgtcctgcgggaaccggagcctccaaggcggggccctctggg
tctgtgtctgcctcggctggagagatgagcagcagcgagccttccaccccggcacagacc
cccctgggggcccccatcatcccctcacccggggggctcctctccccttcagccccccca
cctccactccccagcaaggaggaggagtctctgcgaggtcaggtgaaagatctggaggaa
aagttagagactctgaggatgaagaggacagaggacaaggtcaagctgaaggagctggag
aaacataagatccagctggagcagctccaggaatggaagaccaagatgcaggagcagcag
aacgacctgcagaaacaactcaaagaggccaagaaggaggcgaaggaggcccaggaggcg
aaggagcactacatggaggagatggcggacacggccgacgctatagagatggccacgctg
gacaaggagatggctgaggagcgggctgagtccctgcagcaggaggtggagtctctgaag
gagaaactggaagagctcgtcatggacctggagatcctcaaacacgagatagaggagaaa
ggttcagacggtgctgcttccagttaccatgtgaaacagctggaggagcagacacacaca
catttgcaggcctgtgtcaggatgcgtgacctgtctgtgtcggagaagcaggaacatgtg
aagnctcagaagcagacagagaggaagagcacagagctggacaccctgaggactcagaga
gagaaactccaggaggagatgaaactggccgagaggaccatcgatgaactcaaagaacag
gtggatggggcactaggagctgaggagatggtggagactctgacagagaggaatctagac
ttggaggagaaagtcagagagctgagagagaccgtcgttgatctggaagccatcaacgaa
atgaatgatgaactccaggagaacgccagagagacggagctggagctcagagagatgctg
gatctgggcggaggcagggtcagggaggcggagaaacgggtggaagctgctcaggagacc
gtagctgactatcaacagaccatcaagaagtaccgtgagctgaccgctcacctgcaggag
gtgaacagagagctgaccagccagcaggaagccacagctgagcagcagcagcagcctcca
cctgagatgtttgacttcaagatcaagtttgctgagactaaggcctatgccaaggccata
gagatggagctgaggaagatggaagtgggccaggccaacagacaggtgtctctcctcaca
tccttcatgcccgactccttcctgcgtcatggaggagaccacgactgtatcctggtgctt
ctgctcataccaagactaatcttcaaggcggagctgatcagtaagcaggcccaggagaag
tttgatctgaatgacaactgtgtggagaggagcgggatgagaggaacggctggggaacag
ctgagctttgctgcaggactgatctactctctcagtctgctacaggctacactacataaa
tacgaacaagcgctgaaccaatgcagcgtggaggtatatcagaagatcgggacgctctac
ccggagatgggcgttcacgaacgttccctggacttcctgatcgacctgctgcacaaagac
cagctggatgagacggtgcatgtggcgccactcaccaaggccatcaaatactaccagcac
ctgtacagtatccacctggcagagcagacagaagactgcaccatgcatctggctgatcac
atcaggtttacccagagtgcgttggactgtatgtgtgtggaggttggtcgtctgcgtgcg
ttcctacacacagggcaggagaagacggacctggccgtgctgctgaaggatctagagact
tcctgttctgacatcagacagttctgtaagaagatccgccgacgcatgcctggtacggac
gtacctgggatacctgctgcactcaccttcttacagcaggtggcagatattctgctggac
tgcaggaaacacctgacctgggtggtggctgtgctgcaggaggtggcggctgcaggggcg
cagatggtcgcccatctaggggagcaggagggactctccgcactcaaactagaggacgtg
gcctttaaggctggagagcagatctatggaactcaaggttctaacccctatgggtgcctg
cgccagtcctgctgcatcgtcatagcaaccatgaacaagatggccaccgccatgcaggag
ggagagatagaccccagtgccccttcccagacacttcctccggtggagctgcgtgccaca
gccctcagagcggagatcacagacgcagaaggactgggcatgaagctggaggacagagac
acagtcatcaaggagctcaagaagtcactcaagttcaagggagaggagctgagtgaggct
agcgtccggctcagtctgttggagaagaaactcgacagttcatctagagacgcagacgag
cgcgtagagaagatccagactcaactcgacgagactcagactctgctcaagaagaaagag
aaggagtttgaggagaccatggatgcgctgcaggctgatatcgaccaattggagtcggag
aaggcggatctgaagcagcgtctgaacagccaatcaaagatgaccatggacgggctgaga
ggagcgccagcgtcgggaatcgcctccattgtcacggggatgacaggagcgactatggcc
agtatgggtcccggtatgggtcccggtatgggtccgggtatgggtcctgggtcgggggtc
ccggtgatagactctcctctcctgacgcagcagattgaggctcagagacacagcatcaaa
cacctgaagaatgagaacaacagactcaaggctgagaagatgcgagcccagctgtcctcc
ctaccacctctccatgtctccaagctccccactagagacggctctcacccagaggtgctc
tctagcgccctctatcgtaagactgaccaattactggacacgttactgcagatgagtgcc
aacgtcaaagtggtggacatcactggcaaatccccagtaactcctagtgcccagctgctg
gaacacacagccagactccagtcccttagcaacactctggacagactgaaggatgaggta
tcagaacatgtggtgacccagagacctggagctcgagccttgtctgactttgccacgttc
ccctgctcctccttcgtcaaggtccaggaggagaagaggggggacatggtgctggtgggg
aaggtgatgatgccgtgttcccgtggtcaggagcaggtccaccgtctcgtcctatcacag
tctcagctccaaagagtgcaccgcctcctgctgacatag
DBGET
integrated database retrieval system
