Oncorhynchus keta (chum salmon): 118382639
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Entry
118382639 CDS
T09424
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118382639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118382639
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118382639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
118382639
NCBI-ProteinID:
XP_052365578
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MSRHRNVRGYNYDEDLDDDDLYGQSVDDDYCISPATAAQFIYSSRQERPNVEPPLEEEEM
EEDEAIHTSPTLTHNLNPLDQGKLYSCLDLMRAVLGDAMPESILTQAALRCAFDPQRALD
AVLSVESAGLPPLDARTNNDAPLPQRANKETAVVPRANQEASAAPRPEKAKDREAGQCQL
DSEVLPKVARMTVSGKKQTMGFDVPSTEENGVVPSPSVHRGGSPDEMTMKTSPETPSKRP
ETPSKGFGGAEEPPSVPTPGRTPGKAKQQLNVRAELEKRQGGKSLLNLVVIGHVDAGKST
LMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERNRGVTMDVGMTKFET
ASKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHGLLVRS
LGVTQLAVAVNKMDQVNWQQERFKEIISKLGHFLKQAGFKDSDVFYVPTSGLSGENLTTK
SSALALTSWYSGPCLLEQIDYFKPPQRSIEKPFRLCVSSSK
NT seq
1564 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacagaaatgtccgaggctacaactatgatgaagaccttgacgatgacgat
ctgtatggacagtctgttgacgatgactactgtatctcccctgctacagcagcccagttc
atctactccagcaggcaggagagacccaacgttgagccacccctagaggaggaggagatg
gaggaagatgaggccatacacacctctcccaccctcacacacaacctcaaccccctggac
caaggcaagttgtactcgtgtctggacctgatgcgtgcggtgctgggtgatgccatgcca
gagtcgatccttacccaggctgccttgcggtgcgccttcgaccctcagagagccttggac
gccgttctctcagtcgagagcgccgggctgccgcccctggacgccaggaccaataatgac
gcaccgctgccgcagagagcaaataaggagacagcagttgtaccaagagccaatcaggaa
gcctcagctgcaccgcgaccagagaaagctaaggaccgtgaggcggggcagtgtcaactg
gactcagaagttctgcctaaagtggcccgcatgaccgtctcagggaagaaacagaccatg
ggctttgacgtgccgagtacagaggagaacggggtcgtccccagcccctccgtccatcgt
gggggtagccctgatgagatgaccatgaaaaccagccccgaaaccccctccaagcgtccg
gagacaccctctaaagggttcgggggggcagaggagcccccttccgtccccaccccagga
cgtacccctgggaaggccaagcaacagctgaacgtcagggccgagctggagaagagacaa
gggggcaagtctctactcaacctggtggttataggtcatgtggatgctgggaagagcact
ctgatgggtcacctgctgtacctgttgggaaacgtcaataaacgcaccatgcacaagtac
gaacaggagtccaaaaaggctggcaaggcctcgttcgcctacgcatgggtcctggatgag
accggggaggagaggaacaggggtgtaaccatggacgtgggaatgactaagtttgagacg
gcctctaaggtggtgactctgatggacgctcctggacacaaagacttcatccctaacatg
atcactggagcggcccaggcggacgtggcggtgttagtggtagatgccagcagaggtgag
tttgaggcagggttcgaggcgggtgggcagacgcgagagcacggccttctggtccgttcg
ttgggcgtcacgcaactcgctgttgccgtcaacaagatggaccaggtaaactggcaacag
gagcgattcaaagagatcatctctaaacttggacatttcctgaaacaggctggatttaag
gactctgatgtgttctatgtgccgaccagtggtctatcaggagagaacctgaccactaag
agttctgctctggcgctaacatcctggtactctggaccctgtctgctggaacagatcgat
tatttcaaaccaccccagaggtcgatagaaaagcccttccgactgtgtgtctcgtcttcc
aaag
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integrated database retrieval system