KEGG   Oncorhynchus keta (chum salmon): 118382639
Entry
118382639         CDS       T09424                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118382639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118382639
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     118382639
SSDB
Motif
Pfam: GTP_EFTU HBS1_N MMR_HSR1 AAA_22 DO-GTPase2
Other DBs
NCBI-GeneID: 118382639
NCBI-ProteinID: XP_052365578
LinkDB
Position
Unknown
AA seq 521 aa
MSRHRNVRGYNYDEDLDDDDLYGQSVDDDYCISPATAAQFIYSSRQERPNVEPPLEEEEM
EEDEAIHTSPTLTHNLNPLDQGKLYSCLDLMRAVLGDAMPESILTQAALRCAFDPQRALD
AVLSVESAGLPPLDARTNNDAPLPQRANKETAVVPRANQEASAAPRPEKAKDREAGQCQL
DSEVLPKVARMTVSGKKQTMGFDVPSTEENGVVPSPSVHRGGSPDEMTMKTSPETPSKRP
ETPSKGFGGAEEPPSVPTPGRTPGKAKQQLNVRAELEKRQGGKSLLNLVVIGHVDAGKST
LMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERNRGVTMDVGMTKFET
ASKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHGLLVRS
LGVTQLAVAVNKMDQVNWQQERFKEIISKLGHFLKQAGFKDSDVFYVPTSGLSGENLTTK
SSALALTSWYSGPCLLEQIDYFKPPQRSIEKPFRLCVSSSK
NT seq 1564 nt   +upstreamnt  +downstreamnt
atgtcccggcacagaaatgtccgaggctacaactatgatgaagaccttgacgatgacgat
ctgtatggacagtctgttgacgatgactactgtatctcccctgctacagcagcccagttc
atctactccagcaggcaggagagacccaacgttgagccacccctagaggaggaggagatg
gaggaagatgaggccatacacacctctcccaccctcacacacaacctcaaccccctggac
caaggcaagttgtactcgtgtctggacctgatgcgtgcggtgctgggtgatgccatgcca
gagtcgatccttacccaggctgccttgcggtgcgccttcgaccctcagagagccttggac
gccgttctctcagtcgagagcgccgggctgccgcccctggacgccaggaccaataatgac
gcaccgctgccgcagagagcaaataaggagacagcagttgtaccaagagccaatcaggaa
gcctcagctgcaccgcgaccagagaaagctaaggaccgtgaggcggggcagtgtcaactg
gactcagaagttctgcctaaagtggcccgcatgaccgtctcagggaagaaacagaccatg
ggctttgacgtgccgagtacagaggagaacggggtcgtccccagcccctccgtccatcgt
gggggtagccctgatgagatgaccatgaaaaccagccccgaaaccccctccaagcgtccg
gagacaccctctaaagggttcgggggggcagaggagcccccttccgtccccaccccagga
cgtacccctgggaaggccaagcaacagctgaacgtcagggccgagctggagaagagacaa
gggggcaagtctctactcaacctggtggttataggtcatgtggatgctgggaagagcact
ctgatgggtcacctgctgtacctgttgggaaacgtcaataaacgcaccatgcacaagtac
gaacaggagtccaaaaaggctggcaaggcctcgttcgcctacgcatgggtcctggatgag
accggggaggagaggaacaggggtgtaaccatggacgtgggaatgactaagtttgagacg
gcctctaaggtggtgactctgatggacgctcctggacacaaagacttcatccctaacatg
atcactggagcggcccaggcggacgtggcggtgttagtggtagatgccagcagaggtgag
tttgaggcagggttcgaggcgggtgggcagacgcgagagcacggccttctggtccgttcg
ttgggcgtcacgcaactcgctgttgccgtcaacaagatggaccaggtaaactggcaacag
gagcgattcaaagagatcatctctaaacttggacatttcctgaaacaggctggatttaag
gactctgatgtgttctatgtgccgaccagtggtctatcaggagagaacctgaccactaag
agttctgctctggcgctaacatcctggtactctggaccctgtctgctggaacagatcgat
tatttcaaaccaccccagaggtcgatagaaaagcccttccgactgtgtgtctcgtcttcc
aaag

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