Oncorhynchus keta (chum salmon): 118382641
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Entry
118382641 CDS
T09424
Symbol
tspearb
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118382641 (tspearb)
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118382641 (tspearb)
Cilium and associated proteins [BR:
oke03037
]
Other cilia and associated proteins
Stereociliary proteins
118382641 (tspearb)
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
118382641 (tspearb)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
118382641
NCBI-ProteinID:
XP_052379242
LinkDB
All DBs
Position
7:complement(54934144..54980251)
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AA seq
617 aa
AA seq
DB search
MVQSRGARGLQLAGSQEALSFPASQLFTNCDHFPSEFSFVVTLKIPRLANKRNEYIFSLV
EEESDRLLIGLLVSQERLHFLFQGPTGKKRITFRAVRLADNHWHTVVVAVTGRYATLRVD
CGMALELVYEKPFPSDLCTAHSRFYVGSRRRWKGLFSGLLRQLVLLPGSDATSRVCPSSD
PRLAVLSVPQALLTMPITPTGNDIVPLYPYEAEVLITPGTQPPCAKAEEGQLWFNTLKKG
LFLCDGRLWMPLLQEKERLDYVEDYQDLYTNSETFDIEVFHIPSQGLFAATANRETKPGS
GIYKWVDGKFQVYQNIITYEARAWKYFTVGNKMFLAVANSKGQPGGEWEESVIYKWSNRK
LMFLPYQTIETHSALDWEAFSIQEQHFLAVANHRRGDNNHNIDSVIYRWNPGTKVFEVNQ
TLETSGAYDWEFFSVGPYHFLVVANTFDGISTNINSTIYIWLGGMFQPFQYIKTVGATDW
EMFQVKDRYFLAVANGQKLNERGPSHYNINSTIYELNVITQTFVKFQDIVTNSAVDWEFF
SVGEEKFLVVANSHDGSSYSLNSVIYRWQGYEGFVPIHWLPTIGCTDWEYFNTTAGSFLV
YSSATSPLSKVFRLKTY
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtccagtccaggggggcccggggcctgcagctagccggctctcaggaggccctcagc
ttccccgcttcgcagctcttcaccaactgtgaccacttcccttctgagttctccttcgtg
gtcacgctcaagatcccacgccttgccaacaagaggaacgagtacatcttctcgttggtg
gaggaggagtcagaccggctgctgattggtctacttgtctctcaggagaggctccacttt
ttgttccagggcccgacaggcaagaaacggatcacgtttagggctgtgcggctggcggac
aaccactggcacacagtggtggtggccgtcaccgggcgctatgctacactcagagtggac
tgcggtatggccctggagctggtctatgagaagcctttccccagtgatctctgcactgcc
cactccaggttctacgtcggcagcaggaggcggtggaaaggactgttctctggtctgctg
cgacaactggttctgttgcctgggtcagatgctacctcccgagtgtgtccctcttcagac
cccagactggcagtcctctctgtccctcaggccctgctcaccatgcccatcacacccact
gggaacgacatagtccccctgtatccttacgaggcagaagtgttgataaccccggggacc
cagcctccctgtgccaaggcagaggagggccagctgtggtttaacacactgaagaaaggc
ttgttcctgtgtgatggacggctgtggatgcctctgctgcaagagaaagagcgtctggac
tatgttgaagactaccaagacctttacaccaactcagagacgttcgacatcgaggtgttt
cacatcccctcccaaggactgttcgctgccacagccaatcgcgagaccaagccgggctct
ggaatctacaagtgggtggatgggaagtttcaagtgtatcagaacatcatcacctatgaa
gcacgggcatggaagtactttactgtgggcaacaagatgttcctagcagtggctaactcc
aagggccagcctggcggggagtgggaggagtcagtgatctacaagtggagcaacaggaag
ttaatgtttctaccttatcagaccatagagacacacagtgctctggactgggaggccttc
agcatacaggaacaacatttcctggctgtggccaatcacagacgaggtgacaacaatcac
aacatcgacagtgtgatttaccggtggaacccggggaccaaggtgtttgaggtgaatcag
accctcgagacttctggggcctacgactgggagttcttttccgtgggtccataccacttc
ctggtggtggccaacactttcgatggaatatccaccaacatcaactccaccatatacatc
tggctgggaggaatgttccagccgtttcaatacatcaagacggtgggagcgacggactgg
gagatgttccaggtcaaggatcggtacttcctggcggtggctaacggccagaaactgaac
gagagaggccctagtcactacaacatcaactcaaccatctacgaactgaacgtgatcaca
cagaccttcgttaagttccaggacatcgtcacaaacagtgcggtggactgggaattcttc
tcggtgggtgaagagaagttccttgttgtggccaattctcacgatggatcctcgtattct
ttaaacagtgttatatacaggtggcagggatatgaggggtttgtccctatccactggctc
ccaaccatcggctgtacggactgggaatatttcaataccacagcaggatcctttctcgtc
tattctagtgccacctctcccctgtctaaagtcttcagactgaagacatactga
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