Oncorhynchus keta (chum salmon): 118382690
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Entry
118382690 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118382690
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118382690
09142 Cell motility
04820 Cytoskeleton in muscle cells
118382690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
ARA70
Motif
Other DBs
NCBI-GeneID:
118382690
NCBI-ProteinID:
XP_052359938
EnsemblRapid:
ENSOKEG00005018950
LinkDB
All DBs
Position
4:22113696..22166879
Genome browser
AA seq
2983 aa
AA seq
DB search
MKYXNVSVCVCLQIFQVAYIIIKAANSPRPGNWVLERSMDGVDYTPWQYYAISDTECLTR
YNITPRFGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADQLTPELLDFTSAR
YIRLRLQRIRTLNADLMTLSYRDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWD
PVAKKLQCVCEHNTCGESCNECCPGYHQEPWQPGTLSNGNTCEKCNCHNKAEDCYYNRTM
DDHKMSMNSHGHFHGGGVCIDCTQNTAGVNCETCADGFYRPHEVSPYSENPCVECGCDMK
GSLTPACIRDDNHAKLEKGLNPGQCLCKEGFVGERCERCAFGYRDFPLCSRCECSLEGSL
NIDPCTECICKENVMGANCDLCKQGFYNLEDRNPEGCTECFCFGVSDVCESSPWSLFQTV
DSNGWLLPTQSVSIYTAPLTDDDNNLIVPSITMIQSYRFVSTWAAPEGFLGNRLTSYGGL
LNYTVAYDVSVDNVDNSLPSQFDLIIEGNGRTLRQTPPKQLFLTPLREQLVSVELLPQGF
VDLHTGQRVDRDELMTVLADLAGLRIRGHLNASAEGALRLSTVSLDMADIRAANPVQARD
VEQCECPWGYLGTSCEFCSSGFYRVGGILFGGNCLQCECNDHATECDINGVCLDCTDNTT
GPHCNQCLPGYYGDTTEGTPEDCQRCACPLIVATNNFSPTCLLEGPGQVTCDQCQQGYTG
TKCERCANGYHGDPTVAGKECVLCECNGNVDPWEPGHCDTSSGVCLKCHSHTSGDDCERC
EDGYYGDAITAKNCQACSCHGNGSYSAMCDLLTGQCTCKPHVVGEKCDECQVGFHSLLSG
QGCRDCNCSQSGSVSTACEEEGRCQCIPGVAGDKCDRCYHGYFNYQDRGCTQCECAHTHG
NCNATTGKCICPPHTIGEKCELCEEGHWGHDTVAGCKSCDCSEAGSSATQCDLTNGQCLC
RPDFARQKCDQCTMGYRGYPECTACNCNINGTREEFCDKELGLCSCEDPGNCVCKDNVGG
GGCDECKKGSFGLSGPNPDGCSPCFCFGVSSDCEELGGMVRVPITLGSDPELLHVVSQRD
PQGSVEGVYYQAPDMLLDAREKENITLPGPYYWRLPKHYQGNKLLSYGGKLSYMVAFYAL
DGAGLANYEPQVLMRGGHLGKKVIYIDMPAPDNRVKTRQDVPLTEHKWKYFNSVSEKAVS
HSDFLAVLSNIEYITIKASYGTGLQQSRISNITMDTALEAEEGSEGLEVACLIETCECPA
GYAGLSCQECSPGYYRQPVTDLNLRGNRPLIQPCVPCQCNNHSQACDLDTGECLGCQHNT
AGEHCNVCGSGYYGNVKGSVSDCSLCACPLKENSFSPTCAMEGVMGDFHCNACKPGYEGR
YCERCSVGYYGNPSGPGGKCEACQCSTAGSLHLVCDSLKGQCECKAGVRGHLCDQCEARH
VLDGDQCVSCDDECTGVLLDDLDALESSFLSVNLTGVILSPYSTLVSLENDTREVKNLMS
WESSPAYHLNRVEEDLTNLTQDIDGLLRQATGLSADGEEVAQSTENRVTQGAKFLEYITT
IHTAIQVLAEEAAGLNRTENLEKDEANSTRLWEQVAAMLETITLVNLSQANASVSTELSA
TEALLQRVLEDLLEPQGAIESQTLNISNTLTEHHQQLEDAHALLMTARENNNHTHTLLGS
IYTNLPEYHGLKQNVSRLNQTAETQLEETQDILADAVNLAEDMSNGTSQLEGAKDQLEQW
NPMLRKHVDTLVMELRKKDALELVYKAEDHARELSKKAQGLQSSLMEVMNTTLNATSAEH
GDSNIRANVQPAEEMANLANLTATMALNMIVQPEESFTDLGSEAVQRSEKILAESLTLRN
STEGLLANISDVTDRMALLKEKLCNTSRLIPEQGALLHSLPNGTSEQVLDAKEQAALANT
SLQRALERLEELRVRLEKSSTAVAQARTSISNTNQLFSDSQSTASTAESKLKEAESRTER
LYDRLKPLKTLGENLSRNLSEIREMINQARKQAASIKVAVLADKNCVRAYTPEVSSSNFN
TLTMTVKTSEPDNLLFYMGSSSSVDFMAVEMQHGKVAYLWDVGSGHAKLEYPDIQINNNK
WHHINATRFGRHGTLSVHQLESEPLPAVKTTSPGSATILEVNKSTLIFVGGLGGQIKSSV
VKMTQFKGCMGEASLNEKNIGLWNYAEREGQCRGCFMSPQTEETSFHFDGSGYSVVEKPL
RSTSTSIVMLFKTLSPNGLLLYLASNGTRDFLSIELVEGQVRLTFELGSGPLTLTSNKAY
NTGSWYKITLQRNKRKVYMAVMAADNSSEKEIMEAESPGTASDLNRSDLDPIYIGGLPMS
RPIRRQVVARSYVGCIKNMEIARSNFDLLRDSYGVKKGCVLEPIRSVSVLREGYVELPSV
SLDPQGELLASFSTRNDTGIILAGFSKAGTRKSRQARQPFLAVMLISGRLEVHVNMAEGG
SVHKVVVKSHSGSFSDGQEHSVILQRNRKMLVVLVDEDHQEMVRLSSEKASLTLTSLYMG
GVPPAEGAGLLRTTSSFYGCIRNLALDSKLLDLSAAVRYHNVDMDSCLLEERPKRVLLPD
DTDLDAEPTPDPARTPSPAPGQLSALTPGTLTCASLDNTSSIPEAQQFGISRHSHMVLSI
NPNTVRRSFSLELSVRTYTQSGLIYYMAHANQMDYATLQLLGGHLFFTCDKGSGPATATF
PVPVNDGQWHTVKTDFNKKSVVISVDGQPSTPVPAKGNTLDVENKLYLGGLPQTYTAKKI
GNVTHSLAGCIQKVLLNSVKLNTQSPVSEQSTAHCFTAAQDGTFFNGSGYAALIKNGYKV
GSDMEVSLEFRSTVSDGVLLGVSSAKVDAIGLELANGQAVFHVNNGAGRVSATSRLGWWL
CDGLWHTLLAKKTKNALSLTVDGVTVLTDNPHPQSTSAETKDPVYVGGFPVGVKQNCLTS
RMPFRGCMRNIRLIKGHMTNILDFSTAFTLQGVSPHSCPSTAT
NT seq
8952 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattaaaatgtgtctgtctgtgtgtgtctccagattttccaggtggcctacatc
ataatcaaggcagccaactcccctcgtcccggtaactgggtgctggagcgttcaatggat
ggtgtggattacacaccctggcagtactacgccatcagcgacacagaatgtctgacccgc
tacaacatcaccccccgcttcggacccccaacctacaaacgagacgacgaggtcatctgt
acctcctactactcacgtctcgtacccctggagcacggagagatccacacgtctttgatc
aacgggcggcccagtgctgaccaactgaccccagagctgctagacttcacctcagcccgc
tacatccggctgcgcctgcagaggatccgcacgctcaacgccgacctcatgaccctcagc
taccgtgaccctaaggaggtggaccccatcgtcaccagacggtactactattccatcaag
gacatctcagtgggcgggatgtgcatctgttacggccacgcccagagctgcccctgggac
cccgttgccaagaagttgcagtgtgtgtgtgagcacaatacgtgtggggagagctgtaat
gagtgttgccccggctaccaccaggaaccgtggcaaccgggaaccctctccaacggcaac
acatgcgagaaatgtaactgccacaacaaggccgaggactgctattacaaccgaactatg
gacgaccacaagatgagcatgaactcgcatggacacttccatggcgggggtgtgtgtatc
gattgtacccagaacacggccggtgtcaactgtgagacctgcgcagatggcttctacaga
ccccacgaggtgtcgccctacagtgagaacccatgtgtggagtgtggctgtgacatgaag
gggtctttgactcctgcctgcatcagagatgacaaccacgccaagctggagaaaggtctg
aacccagggcagtgtttgtgtaaagagggctttgtgggtgagcgctgtgaacgctgtgcc
tttggctacagggacttccccctgtgttcacgctgtgagtgcagtctggaaggcagcctc
aacatcgacccctgcacagagtgcatctgcaaggagaacgtgatgggggccaactgtgac
ctgtgtaagcagggtttctacaacctggaggaccgtaaccctgagggatgcacagagtgt
ttctgcttcggtgtgtctgacgtgtgtgagagttcaccctggtctttgtttcagactgtt
gactccaatggatggctccttcctacccaaagcgtctccatctacacggcacccctcact
gatgacgacaacaacctcattgtccccagcatcaccatgatccagtcgtaccgttttgtg
tctacctgggccgctccggagggcttcctggggaacaggctgacatcatatggagggctt
ttaaactacactgtggcctatgatgtttctgtggacaatgtggataattctctgccatca
cagtttgatttgattattgaggggaacgggagaaccctgcgtcagacgccccccaagcag
ctcttcctgacgcccctgcgggagcagcttgtttccgtggagctcctaccgcagggcttc
gtagacctacacacaggccagagggttgacagggacgagctgatgaccgtattggcggac
ttggccggactgaggatcagaggccacctcaatgccagcgcagagggggcactcaggttg
agcacagtatctctggacatggcagacatcagggctgctaacccagtccaggcccgggac
gtggagcagtgtgagtgcccctggggctacttgggcacatcctgtgagttctgttcatct
ggattctatcgcgtcggtgggatcctgttcggaggtaactgtctccagtgtgagtgtaac
gaccacgctacagaatgtgacatcaacggagtctgtctggactgtacagacaataccact
gggccccactgtaaccaatgccttcccggttactatggcgacaccacagagggcacccca
gaggactgccagagatgtgcctgcccgctgatagtggcgacgaacaatttcagccccacc
tgtctcctggagggccctggacaggtgacatgtgaccagtgccagcagggctacactggg
actaagtgtgagaggtgtgctaatggttaccatggcgacccgactgtggcaggcaaggag
tgtgtgctgtgtgagtgtaacggaaacgtggacccctgggagccgggccactgtgacacc
agcagcggtgtgtgtctgaagtgtcacagccacaccagcggagacgactgtgagaggtgt
gaggacggctactatggtgacgccatcactgccaagaactgccaggcttgcagttgccat
ggaaatgggtcatactcggccatgtgtgacctgctcactggacagtgtacctgcaaaccc
cacgtagtgggagagaagtgtgacgagtgtcaggtgggcttccacagtcttctcagtgga
caggggtgcagagactgtaactgtagccaatcaggatctgtgtccacagcatgtgaggag
gaggggcggtgccaatgcatcccaggggtggcgggggacaaatgtgaccgatgttaccat
ggttacttcaactaccaggacagagggtgtacacagtgtgagtgtgcccacacccacgga
aactgtaatgcgacgacaggcaagtgtatctgccctccccacaccataggagagaagtgt
gagttgtgtgaggaaggtcactggggtcacgacactgtggcaggttgtaagtcatgtgat
tgcagtgaggcgggcagttctgccacccagtgtgacctcaccaatgggcagtgcctgtgc
cgtccggattttgccaggcagaaatgtgaccagtgcaccatgggctacaggggctaccca
gaatgcacggcgtgcaactgcaacatcaacggcaccagagaggagttctgtgataaggaa
ctgggcctgtgcagctgtgaggacccagggaactgtgtgtgcaaggacaatgtgggcgga
ggtggctgtgatgagtgtaagaagggatccttcggcctatctggtcctaacccggacggc
tgcagcccctgtttctgtttcggagtctcctcagactgcgaggagctcggtgggatggtc
cgtgtaccgatcacactggggtctgacccagagctgctgcatgtggtcagtcagcgtgac
ccccagggcagtgtggaaggggtctactaccaggccccagacatgctgctggacgccagg
gagaaagaaaacatcacactgcctggaccctactactggaggcttcccaaacactaccag
ggaaataagttgttgtcgtatggagggaagctgtcctacatggtggcgttctatgctctg
gacggggctggcctggccaactacgagcctcaggtcctgatgagggggggtcatctggga
aagaaggtcatctacatcgatatgcctgcccctgacaacagggtcaaaacacgtcaggac
gtcccactgacggagcacaagtggaagtatttcaactctgtgtcagagaaagctgtgagt
cactccgacttcttggcggtcctgagcaatatcgagtacatcaccatcaaggcctcgtat
ggtacagggttgcagcagagcagaatctccaatatcaccatggatacggccctagaggca
gaggaggggtcagagggtttggaggtggcatgtctgatagagacctgcgagtgtccagct
ggctacgctggactgtcctgccaggagtgttcccccggctactaccgccaaccagtgact
gatctgaacctgcgggggaacagacccctgatccagccctgcgtgccctgccagtgtaac
aaccacagccaggcctgtgacctggacacgggagaatgtctgggctgccagcacaacaca
gcaggcgagcactgtaacgtgtgcggctctgggtactatgggaacgtaaaaggctctgtc
agtgactgctctctgtgtgcctgccccctcaaagagaacagcttcagtccaacctgtgca
atggagggagtgatgggagacttccactgtaacgcctgcaagcctggttatgagggacgc
tactgtgagaggtgttcagtgggttactatgggaacccgtctggtccaggagggaagtgt
gaggcgtgtcagtgtagtactgcaggttctctccatctggtgtgtgactctctgaagggc
cagtgtgaatgtaaggccggtgtcaggggacatttgtgtgaccagtgcgaggcgagacac
gtcctggacggggaccagtgtgtctcgtgtgatgatgagtgtacgggggtcctcctggat
gacctggatgcattagagagctccttcctgtctgtcaacctgaccggggtcatcctgtcc
ccctacagcacactggtcagcctggagaacgacacacgagaggtcaagaatctgatgtct
tgggaaagtagcccagcatatcacctgaacagggtggaggaggacttgacaaatctcacc
caggacatagacggactgctacggcaggctacagggctgtctgctgatggagaggaagtg
gctcagtccacagagaacagggttacccagggggccaagtttctggagtacatcaccacc
attcacactgccatacaagtcctggcggaggaagctgccggtctgaacaggacagagaac
ttggagaaggacgaggctaacagcacacgtctctgggagcaggtggcggccatgttggaa
accatcacattagtcaacctatcccaggccaacgccagcgtctctacagaactcagtgct
accgaggctctcctccagagggtactggaggaccttctggagccccagggggcgatagag
tcccagaccctgaacatctctaacaccctgactgaacaccaccaacagctagaggatgcc
catgccctactgatgactgccagggaaaacaacaaccacacacacaccctgctggggagc
atctacaccaacctgccagagtaccacggtctgaagcagaatgtgagccggctgaaccag
acagcagaaacccaactagaggagactcaggacatcctggctgatgctgtcaatctagca
gaggacatgagcaacggcacctctcagctggagggggccaaggaccagctggaacagtgg
aaccccatgttgaggaagcatgtggacactctggtaatggagctgaggaagaaagatgct
ctggagctggtctacaaggctgaggaccacgcccgggaactcagcaagaaggcccagggt
ctgcagagctctctaatggaggtgatgaataccactctgaacgccaccagcgcagagcat
ggcgactctaacatcagagctaacgtccaacctgcagaggagatggctaacctagccaac
ctgactgctactatggccctcaatatgattgtccagccagaggagtctttcactgatctg
ggatctgaggctgtgcagcgtagtgagaagattctggccgagagtctaaccctgagaaac
agcactgagggtctcctggctaacatcagtgatgtgacagatagaatggccttgctgaaa
gagaaactctgtaacaccagccgtctcatcccagagcaaggcgccctgctccacagcctg
cccaacggcaccagtgagcaggtgctggacgccaaggagcaggctgccttggccaacact
tccctacagagggcgctggagcgcctggaggagcttcgggtcagactggagaagtccagc
acggctgtggcccaggccagaaccagcatctccaacaccaaccagctgttctccgactca
caatccactgccagtacagctgagtctaagctgaaggaggcagagagtcgtacagagaga
ctgtatgaccgtctcaaacccctcaagaccctgggggagaacctgagcagaaacctgtct
gagatcagagagatgatcaaccaggcccgcaaacaggctgcctctatcaaggtggcagtg
ctggcagacaaaaactgtgtgagggcctacacacctgaggtatcctccagtaacttcaac
actcttaccatgaccgtcaagaccagcgagcctgacaacctgctcttctacatgggcagc
agctccagcgtggacttcatggcggtggagatgcagcatggcaaggtggcgtatctgtgg
gacgtgggttcaggccacgccaagctggagtaccccgacatccagatcaacaacaacaag
tggcaccacatcaacgccacgcgctttgggaggcacggcacactgtcagtccaccagctg
gagtcagaacccctgcccgcggtcaagaccacctcaccaggctccgctacgatcctggaa
gtcaacaagtccaccctgatattcgttggtggcctgggaggccaaatcaagtcctctgtg
gtgaaaatgacccagtttaagggctgtatgggggaggcgtcgctcaacgagaagaacatc
gggctgtggaactacgctgagagggagggccagtgtcgcggctgcttcatgagtccgcag
acagaggagacgtccttccactttgatggcagtggttactcagtggtagagaaacccctc
cgctccacctccacctccatcgtcatgctgttcaagaccctctcccccaacggcctgctg
ctctacctggcctccaacggcacgagggacttcctgtccattgagctggtggagggccaa
gtgcgtctgacctttgaactgggctctggccctctgaccctcacctccaacaaagcctac
aacaccggcagctggtacaagatcaccctacagaggaacaaacgcaaagtttatatggcg
gtgatggcggcagacaactcatcagagaaagagatcatggaggcggagtctcctgggacc
gcctctgacctcaaccgctccgacctggacccaatctacatcgggggactgcccatgtct
cgccctatcaggagacaagtagtagcacggtcctatgtgggctgcatcaaaaacatggag
attgcccgctccaactttgacctgctccgagactcctatggtgtcaagaaaggctgtgtg
ttagagcccatccgcagtgtgtctgtactgagagagggctatgtggagttgccctctgtt
tctctcgacccccagggggagctgttggcctccttctctacccgcaatgacactggcata
atcctggcaggcttcagcaaggcaggcacccgcaaaagcagacaggctcgccagcccttc
ctggcagtcatgctgatttcggggcgcttggaggttcatgtcaacatggcagagggcggg
agcgtccacaaggttgtggtcaaatcacactctgggagtttcagtgacggacaggagcac
tcggtcatcttgcagaggaacaggaagatgctggttgtactagtggatgaggaccaccag
gagatggtacgtctgtcctcggagaaggcctctctgaccctcacctctctgtacatgggc
ggagtcccaccagcagagggcgccgggctgctccgaaccacctcctccttctacggctgc
atcaggaacctggccctggactccaagttgttggacctgtcagctgctgtgaggtaccac
aacgtggacatggacagctgtctattggaggaaaggcctaaaagggtcctcctacctgat
gacactgacctagatgccgagcccactccggaccctgccagaaccccttcaccagccccc
ggccagctcagcgcgctcacccccggcacactcacgtgtgcatcgctggacaacacctca
tccatcccagaagcccagcagtttggcatctccagacatagtcacatggtcctcagcatc
aaccccaacacagtgaggaggagtttctctctggagctgtcggtgcgtacctatacccag
agtggtttgatctactacatggcccacgccaaccagatggactacgccactctgcagctg
ctgggaggacatctgttcttcacctgtgacaagggcagcggccccgccaccgccaccttc
cctgtgcccgtcaacgacggccagtggcacacagtgaagacggacttcaataagaagagt
gtggttatcagtgtcgacggccagccgtcaactccagtgccggctaaaggaaacactctg
gatgtggagaacaagctgtatttgggaggacttccccagacctacaccgccaagaagata
ggcaatgtgacccatagtttggcaggctgcatccagaaggtgttgctgaacagtgttaag
ttgaacacccagagtccagtgtctgaacaatccactgcgcactgcttcaccgcagcccag
gacgggaccttcttcaatgggagcggatacgctgctctgataaagaatgggtacaaagtg
ggctcagatatggaggtgtctctggagttccgcagcacagtgtcagatggagtcctcctt
ggggtcagcagtgccaaggtggacgccatcgggctggagctagccaacggacaggcggtg
ttccacgtgaacaacggtgccgggcgggtgtcggccacttcgcggctgggctggtggctg
tgtgacggtctctggcacaccctgctggcaaagaagaccaagaacgctctgagtttgacc
gtggacggagtcacagtgctcaccgacaacccccacccccagtccacctcggctgagacc
aaggacccggtctacgtgggaggcttccctgtcggtgtgaaacagaactgcctgacatcc
agaatgccgttccgtggatgtatgcgtaacatccgcttgatcaagggtcacatgaccaac
atcctggacttcagtactgccttcaccctccaaggagtgtcaccccactcctgccccagc
accgccacataa
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integrated database retrieval system
