Oncorhynchus keta (chum salmon): 118382847
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Entry
118382847 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118382847
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118382847
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118382847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_DUS3L
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118382847
NCBI-ProteinID:
XP_052366454
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MAEAAATAAPAIPGAWTKHVTCRYFMHGLCKEGINWRYSHDLNTSQPAAAMICKFFQKGN
CVFGDRCRDLVLRDLVLRDLVLRDLVLRDLVLRDLVLRDLVLRDLVLRDLVLRDLVLRDL
VLRDLVLRDLVLRDLVLRDLVLRDLVLRDLLLSSSPSPLALSSSPSPLPLSSSPPPSSDP
VKSEGSGMSPLMEREKDVAGDDKELRKTLCPYAAMGECRYGLNCAYLHGDVCDMCGLQVL
HPSNDAQRSEHTKACIEAHEKDMELSFAIQRSKDMQCGVCMEVVFDKANPSERRFGILSN
CCHCYCLKCIRKWRSAKTFESKIIKSCPECRITSNFVIPSEYWVEDKEDKQKLIQKYKDG
MGTKACRYFDQGRGTCPFGSNCFYKHAFPDGRLEEPQRRSAGCNGRNRNSRRTPLWDLFE
ERENSSDSLDNEDEEMVTFELSEMLLMLLATGTDDIDVTDSEDEWDLFHEELDDIYEIYL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagctacagcggctccagcaataccaggagcctggaccaaacacgtc
acctgcaggtatttcatgcacgggctttgcaaagaaggcatcaactggcgatattcccat
gatctcaacaccagtcaaccagctgcagctatgatttgcaagttctttcagaaaggaaac
tgtgtgttcggcgaccggtgcagagatttggtgctgagagatttggtgctgagagatttg
gtgctgagagatttggtgctgagagatttggtgctgagagatttggtgctgagagatttg
gtgctgagagatttggtgctgagagatttggtgctgagagatttggtgctgagagatttg
gtgctgagagatttggtgctgagagatttggtgctgagagatttggtgctgagagatttg
gtgctgagagatttggtgctgagagatttgctcctctcctcttccccctcccctctcgcc
ctctcctcttccccctcccctctccccctctcctcttccccccctccctcgtcagacccg
gtgaagtctgaagggtcggggatgagtcctctgatggagcgagagaaagacgtggcggga
gacgataaggagttgaggaagactctgtgtccctacgccgccatgggggagtgtcgctac
ggacttaactgtgcctatctccacggcgacgtgtgtgacatgtgcggtctgcaggtgctc
cacccctccaacgacgcacagcgatcagaacacaccaaggcttgcatcgaggcccatgag
aaggacatggagctgtcgtttgccatccagcgcagtaaggacatgcagtgtggcgtgtgt
atggaggtggtgtttgacaaggccaaccccagtgagagacgcttcggcatcctgtccaac
tgctgccactgctactgcctcaagtgcatccgcaagtggaggagcgccaagacgttcgag
agcaagatcatcaagtcctgtccagagtgtcggataacgtccaacttcgtcatccccagt
gagtactgggtggaggacaaggaagacaagcagaaactgatacagaaatacaaggatggc
atggggactaaagcctgtcgttacttcgaccagggtcggggcacctgcccgtttggctcc
aactgcttctacaaacacgccttccctgatgggcggctggaggagccccagaggagatca
gcagggtgcaatggcaggaacaggaactcgaggaggacacccctgtgggacctgtttgaa
gagcgggagaacagcagcgactctttggacaacgaggacgaggagatggtgacctttgaa
ctgagcgagatgctcctcatgctcctcgccacgggaaccgacgatattgacgtcacggac
tcggaggacgaatgggacttgtttcacgaagagctggacgatatctacgagatttaccta
tag
DBGET
integrated database retrieval system
