Oncorhynchus keta (chum salmon): 118382871
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Entry
118382871 CDS
T09424
Symbol
cyfip1
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04810
Regulation of actin cytoskeleton
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118382871 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118382871 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118382871 (cyfip1)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118382871 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
118382871 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
118382871
NCBI-ProteinID:
XP_052331714
LinkDB
All DBs
Position
22:complement(56477717..56680581)
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AA seq
1221 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPCSLMYQNEMLEEGXEYAVMLYTLRGAA
HAIPQVKCNEQPNRVEIYEKTVEVLEPEVTKLMNFMYFQRTAIDRFCGEVRRLCHAERRK
DFVSEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFLRKMSEPSSIQESQNL
SMFLANHNKITQSLQQQLEVINGHDELLADIVNLCVDYYENRMYLTPNEKHMLLKVMGFG
LYLMDGSNSNIYKMDAKKRINLTKIDRFFKQLQVVPLFGDMQIELSRYIKTSAHFEENKN
RWSCTSTGSSPQYNICEQMVQIREDHMRFISELARYSNSEVVTGSGRQEAHKTDHEYRKL
FDLALQGMQLLSQWSAHVMEVYSWKLVHPTDKYSNKECPDNAEEYERATRYNYTIEEKFA
LVEVMAMIKGLQVLMGRMESVFNHAIRHTIYSALQDFAQLTLRDPLRQAIKKKKSVVQSV
LQAIRKTICDWETGREPHNDPALRGEKDPKGGFDIKVPRRAVGPSSTQLYMVRTMLESLI
ADKSGSKKTLRSCLEGPTIMDMEKFHRESFFYTHMLNFSETLQQCCDLSQLWFREFFLEL
TMGGRIQFPIEMSMPWILTDHILETKEASMMEYVLYPLDLYNDSAHYALTKFKKQFLYDE
IEAEVNLCFDQFVYKLADQIFAYYKILAGSLLLDKRLRADCKNQGANIPWPASNRYETLL
KQRHVQLLGRSIDLNRLITQRVSAALYKSLELAINRFESEDLTSIVELEGLMNINRMTHK
LLSKFLTLDSMDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTNRFVRTVLP
FSQEFQRDKPPNAQPQYLYGSKALNLAYSSIFGFYRHFVGPPHIKAMCRLLGYQGIAVVM
EELLKVVKSLGTIMQYVKTLMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTV
CFQNLREVGNALLFCLLSEQSLSQEEVCDLLHAAPFQNILPRVHVKEGERLDAKMKRLET
KYTALHLVPLIERLGTPQQIAITREGDLLTKERLCCGLSMFEVILTRVRGFLDDPIWRGP
LPSNGVMHVDECVEFHRLWSAMQFVYCIPVGAHEFTVEQCFGDGLHWAGCMIISLLGQQR
RFDILDFSYHLLKVQKHDGKDEIIKSVPLKKMVDRIHKFQVLNDEIYAILNKYLKSGDGE
NMPVEHVRCFQPPIHQSLASN
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacggtgaccctggaggatgctctgtccaatgtggaccttctggaggagctg
cctctcccagaccagcagccctgcatcgagcctctgccctgctccctcatgtaccagaat
gagatgctggaggagggcntagagtatgctgtgatgctgtacactctgagaggagctgct
catgctatcccacaggtgaagtgtaatgagcagcccaacagagtggagatctatgagaag
acagtggaggtgctggagcctgaggtcaccaagctcatgaacttcatgtacttccagcga
acggctatagaccggttctgtggggaggtgcgtcgtctctgccacgctgagaggaggaag
gactttgtctccgaggcctacctcctgaccctggggaagttcatcaacatgttcgctgtg
ctggatgaactcaagaacatgaagtgtagcgtcaagaacgaccactctgcctacaaacga
gctgcccagttcctcaggaaaatgtcagaaccctcatccatccaggaatctcagaacctc
tccatgtttctggccaaccacaacaagatcactcagtctctgcagcagcagttggaggtg
attaacggccacgatgagctgctggctgacatagtcaacctgtgtgttgattactatgag
aacaggatgtacctgacccccaacgagaaacacatgctgctcaaggtgatggggtttggt
ctgtacctgatggatggcagtaacagcaacatctacaaaatggacgccaagaagaggatc
aacctgacaaagattgacaggttcttcaagcaactgcaggtggtgcctctgtttggtgac
atgcagattgagctgtccaggtacatcaagaccagcgcacactttgaagagaacaagaac
aggtggtcctgtacctcaacaggcagcagtcctcagtataatatctgtgagcagatggtt
cagatcagggaagaccacatgaggttcatctctgagctggctcgctacagtaacagtgag
gtggtgacggggtccggtcgtcaggaggcccacaagacagaccatgagtacaggaagctg
tttgacttggcactgcaggggatgcagctactgtcccagtggagcgcacacgtcatggaa
gtgtactcgtggaagctggttcatccaacggataagtactcgaacaaggagtgtcctgac
aacgcggaggagtatgaacgagctacacgatacaactacaccatcgaggagaagtttgcc
cttgtcgaggtgatggccatgataaagggtttacaggtcctgatgggtcgtatggagtcg
gtgtttaaccacgctatccgccacaccatctactcggccctgcaggacttcgcccagctc
accctgagagacccgctacggcaggccatcaagaagaagaagagcgtggtgcagagtgtc
ctgcaggccatcaggaagaccatctgtgattgggagacagggcgtgagccccacaatgac
cctgccctgcgaggagagaaagaccccaagggaggctttgacatcaaggtcccccgccgt
gccgtcggcccctccagcacacagctgtacatggttcgtaccatgctggagtctctgata
gctgataagagtggttctaagaagactctccgcagctgtctggagggacccaccatcatg
gatatggagaagttccacagagagtccttcttctatactcacatgctcaacttcagcgag
accctacagcagtgctgtgacctgtctcagctgtggttcagagagttcttcctggagctg
accatgggtggcaggatccagttccccatcgagatgtccatgccctggatcctcacagac
cacattctggagaccaaggaggcctctatgatggagtatgtgctgtatcctctggacctc
tataatgacagtgcccactacgccctgaccaagttcaagaagcagttcctctacgatgag
atagaagcagaggtcaacctgtgttttgatcagtttgtctacaagctggctgatcagata
tttgcctactacaagattctagctggaagtctgttgctggacaagcgtctgagagcggac
tgtaagaaccagggagccaacatcccctggcctgcgtccaaccgctacgagaccctgctg
aaacaacgccatgtacagctcctgggtcgttccatagacctgaaccgtctgatcactcag
agagtgtctgctgctctctacaagtctctggagctggccatcaaccgctttgagagcgag
gacctcacatccatcgtggaactagaaggtcttatgaacatcaaccgtatgacccacaag
ctgctgtctaagttcctgacgctggacagtatggacgccatgttccgggaggccaatcac
aatgtctccgccccctacggacgcatcacactccatgtcttctgggaactcaactacgat
ttcctccccaactactgctacaatggatctaccaacagatttgtccgcacggtcctgccc
ttctctcaggagttccagagggacaagccacccaacgcccagccccagtacctgtatggg
tcaaaggctctgaacctggcgtacagcagtatctttggtttctacagacactttgttggt
cctcctcacatcaaggccatgtgtcgtctgctggggtaccagggcatcgctgtggtcatg
gaggaactgctcaaagtggtcaagagcctgggcaccatcatgcagtatgtgaagaccctg
atggaggtgatgcctaagatctgccgtctccctcgccacgagtacggctcgccgggtata
ctggagtttttccaccaccagctgaaggacatagtagagtacgccgaactgaagaccgtc
tgcttccagaaccttagggaggtgggcaatgcactgctcttctgtctgctcagcgaacag
agcctgtctcaggaggaggtgtgtgacctgctacatgctgcaccattccagaacattctt
cccagggtccatgtcaaggagggtgagcgtcttgatgccaagatgaaacgtctggagact
aaatacacagccctgcacctggttcctctgatagaacgcctgggaaccccacagcaaata
gccattacccgtgaaggtgacctgctgaccaaagagcgtctgtgctgtggcctgtccatg
ttcgaggtcatcctcacacgtgtccgcggtttcctggacgaccccatctggcgcggcccg
ttgcccagcaacggcgtgatgcacgtggacgagtgtgtggagtttcaccggctgtggagc
gccatgcagtttgtttactgcatccctgtaggagcacacgagttcaccgtggagcagtgt
ttcggggacggtctccactgggctgggtgtatgatcatctccctactgggtcaacagaga
cgctttgacatcctggacttcagctatcacctgctgaaggtgcagaaacacgatggaaag
gatgagatcatcaagagtgtgcctcttaaaaagatggtggacagaatccacaagttccag
gttctcaacgatgagatctacgccattctgaacaagtacctgaagtcaggcgatggggag
aatatgcctgtggagcatgtccggtgtttccagcctcctatccaccaatccctggccagc
aactga
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