KEGG   Oncorhynchus keta (chum salmon): 118383344
Entry
118383344         CDS       T09424                                 
Symbol
sde2
Name
(RefSeq) splicing regulator SDE2 isoform X1
  KO
K25059  replication stress response regulator SDE2
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118383344 (sde2)
   03032 DNA replication proteins [BR:oke03032]
    118383344 (sde2)
   03400 DNA repair and recombination proteins [BR:oke03400]
    118383344 (sde2)
Spliceosome [BR:oke03041]
 Complex C
  Other components
   Complex C specific factors
    118383344 (sde2)
DNA replication proteins [BR:oke03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    118383344 (sde2)
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    118383344 (sde2)
SSDB
Motif
Pfam: SDE2 SDE2_2C Sde2_N_Ubi_vert Exonuc_VII_L NtrZ
Other DBs
NCBI-GeneID: 118383344
NCBI-ProteinID: XP_052383359
LinkDB
Position
10:complement(59029626..59058045)
AA seq 403 aa
MELFLSGPLLHFCNASFPTGASVRDLVDIFTKEKGIPSSDLYVKNNGRLSELDEKLQAGA
VYRLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKEMAEWLKKQA
DREAEKEQRRLERLQRKLAEPKHHFTDPEYEKQCHDLSERLEDSVLKGMQASSSGLVKVD
EAPKRKKSPPNKGQGKSKKKCFWTGVGGLDDLDSSEDDNDSSDSGNSPSTSASGSGVPDC
PVTGATSAHTSASQSRAEQTATPEAPRASSNSISGPSSPESPAEVQTQSQAEAAAFATSG
SGEQKEVVPTEETFPKTDNLSVAQSSVNQAACEDGPLDLQAVHSHKELETLGLDRLKAEL
IARGMKCGGTLSERAARLFSTVGLSAEDIDPALLAKPSKGKKQ
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggagttgtttctttctggtccacttcttcatttttgcaacgcttcttttcctactgga
gcatctgttcgtgatctagttgatatttttacgaaagaaaagggaatcccatcatcggat
ctctatgtcaagaataatggacgactatcagagcttgatgagaaattgcaggctggagcg
gtgtatcgactggagcctcgtctctgtggagggaaaggaggctttgggtctatgcttagg
gctcttggggcacaaattgagaagactacaaaccgcgaagcctgcagagacctaagcgga
aggagactaagagatgtcaaccatgagaaagagatggcagagtggcttaagaagcaggca
gaccgcgaggcagagaaagagcaaaggcgtctggagagactgcagaggaagctggccgag
cccaagcatcactttacagacccagagtacgagaagcagtgccacgatctctcagaacgc
ctggaggactccgttttaaaaggaatgcaagcctcttccagcgggctagtgaaagtagac
gaggcaccgaaacgcaaaaagtcacctccaaacaaaggccaagggaaaagcaagaagaaa
tgcttttggacgggtgttggtggcctggatgacctcgacagctctgaggatgacaatgat
tcaagcgacagcgggaactctccctccacatctgcttccggttcaggggtacccgattgt
cccgtaacgggagcaacgtcagctcacacatcagcctctcagagcagagcggaacaaacg
gcaactccggaagctcctagggcaagcagcaactccatctcaggacccagctctccagag
agcccagccgaggtgcagacacaatctcaagcagaggcagcagcttttgctaccagtggt
agtggggagcagaaggaggtggtccccacagaagaaacattcccaaagaccgacaatcta
agcgtagctcaaagtagcgtcaaccaagccgcttgtgaagatgggcccttagacctccag
gcagtgcactcacacaaggagttggagactttggggttggacaggctaaaggcggaactg
attgcacgggggatgaagtgtgggggaaccctgtccgagcgcgctgctcgccttttctcc
accgtagggctttctgcagaggacatcgatcctgccctgttggccaaacccagcaagggc
aagaagcagtga

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