Oncorhynchus keta (chum salmon): 118383457
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Entry
118383457 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118383457
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118383457
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
U-box type E3
118383457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
U-box
zf-C3HC4_3
zf-CCHC_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
118383457
NCBI-ProteinID:
XP_052361413
LinkDB
All DBs
Position
Unknown
AA seq
1665 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLAELKRQIMGRERLKATDCDLQITNAQTREEYTDD
ICCSMSVVVVACCCSNLLSSPCLWWLLTCRCCLFCSDRSDMAAGSSRPTDSSPSVSLAQL
SKTANLAEANASEDDKIRAMMSQSSSEYDPIHYSKKAIGPPPAHYTCYRCGKNGHYIKHC
PMQMDKSVEAPKPIRTSKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYALGKKER
PPFVPREASSSEDEADPIPDELLCPICNDLMNDAVVIPCCGNSYCDDCIRTSLLDSEEHT
CFTCKQSDVSPDALIANKFLRQAVNNFKNESGYTKPARNKTLQQSAPPPARPQPFRTLGS
RQQDPLLASTRQQDPVLASTRQQDPLLASTRQQDPLLASTRQQDPLLASTRQQDPYWPAL
RQQDPLLASTRQQDPLLASTRQQDPLLASTRQQDPLLASTRQQDPLLANASRPPASLTPP
VTLTQSLPIQTPPMGPPEVSISPDPAPEPHRAEPRHLANHNEPPPPGEMEAGPYMVSEPP
IRSADSGPQGYHMPMIGHPPPIRPSHPSGPPPQPSHSHRGGPRPPWDRPYRPLSDHIPPP
RHTLPSAPGPAPHLYPGPNLYHPPPNPHSIPPQSYPPPYSTGPPPPVNYPPQPLYPHGQM
PPGVNAPWVPPPNTQPHSLGPPPLLPSGPPLSKEDFYRQRRLQQEQVTSKLDEFTKDFAK
ELMEYRPAPKRRRRSYSRSRSYSRSPFSRSPYSRSPRSRSRSYSYTPSRSRSRSRSYGRS
PFSRRNGGRGGRSRSYGRSPRSRSRSRSYGYRRSGSPRSPPPYRGGGGGGGGWEGGDGAE
GGGGGGYRPRSRSPGGYRRSRSPGGVRGHHKPPPREPAPYEPKGGPDLSPGGRERWERDS
YRQWEKEYRDWYNKYYKDYSTQHASVHHRGGRGSRERDRLTPPPRDYSPQGRVRRGERGG
PPGPHRTHHALSALPSASIRGGGSKERTQGGTKTSEGGTKTLKGKKLKKKKNGEEPDSAD
QSLDRGDATPVRDEPMDDLHTLTPSKAPPTSTKVSSNKAALLSAKTPPTSSGQSEKSRKE
KVGKVKVKTEGKVKGEKVKRKTGGEATVTASKVKESSAAKPIKASKVKPDEPIRREKGRS
TPTVRGGLAKLPCPCPAPSPITPTTSLNTWATPGGGGEIPFTVSGYAPLVAPSSLHLPPQ
QRRGGGWRKGGGGWTGGWGGPRLSSAAPRVRIPREDFLPSLPSVKPFPQRRIKLNRDLGR
NSSMARPEERPAPAANITTTITSTGERPAGPERGGAERDGGTERVAVMVERRSSGERSEV
RSVRSERPSSGERLPERGGGGGGGRSVSLDRMTIAERSAIAKKPDAEPEPGCCVKTPGPQ
TQRRPSPVQFPSPGRERRDRGTGGVLIQPPPRSKWEREEEEEEEEQHSASRENGALAVSS
SVPRDALRREVSPAPPSGQSREVQGSVSKTANTEGRRGREEGTRRREEGRGLKKGQVNFR
KPAKTESRGVKEEGRGGVGREESRGAGPEPRRQRLCSDLGRETDEAAFVPDYSEGEGSDG
ERGSGLSHSPSHNTQSPASQSPGGSPSNHSGSTATDKKKKKKHKKHKKHKKHKKHCADVE
PPVEGRKEHKHKSKKKKHRKTKEEEGGGGGGGEAEEKTGQESATI
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcattataaattctcgtccaaactggactacaacaccgtgacctttgac
gggctgcacatcaccctggccgagctgaaacggcagattatgggcagagagcgcctcaaa
gccaccgactgcgacctgcagatcaccaacgcacagacccgtgaagagtacactgatgat
atatgctgttccatgtctgtggtggttgttgcatgttgttgttctaacctgttgtctagt
ccatgtctgtggtggttgttgacatgtcgttgttgtttgttttgtagtgaccgttctgac
atggctgctggatcctccagacccaccgactcttcaccgtccgtctccctggcccagctc
tctaagactgccaacctagctgaggccaatgcgtcagaggatgacaagatcagagccatg
atgtcccagtccagcagtgaatatgaccccatacattactctaagaaggccataggaccg
cctcctgcacattacacctgctatcgctgtggcaagaacggacactacatcaaacactgc
cccatgcagatggataagagcgtagaggctcctaagccaatcaggaccagtaagggaatc
cctcagagctttatggtgaaggctgaaccaggaacgaaaggagccatgttgaccagcact
ggagaatatgctattcctgctatcgacgcggaggcctatgctctgggtaagaaggagcgt
ccccctttcgttcctcgtgaagcgtcatcgtctgaagatgaggctgatccaatccctgat
gagctgctctgccccatctgtaacgacctgatgaatgatgctgtggtcataccctgctgt
ggtaactcctactgcgacgactgtatcaggaccagtctgctggactcagaagaacacacc
tgtttcacctgcaaacagtcagacgtctcacctgacgctctcatcgctaacaagttccta
cgacaggcagtgaataactttaagaatgagtctggttacaccaaaccagcacgaaacaaa
accctgcagcagtctgccccgcccccagcacggcctcagccattcagaaccctcggctca
cgccagcaggaccccctattggccagcactcgccagcaggaccccgtattggccagcact
cgccagcaggaccccctattggccagcacccgccagcaggaccccctattggccagcact
cgccagcaggaccccctattggccagcactcgccagcaggacccctattggccagcactc
cgccagcaggaccccctattggccagcactcgccagcaggaccccctattggccagcact
cgccagcaggaccccctattggccagcacccgccagcaggaccccctattggccagcact
cgccagcaggaccccctattggccaacgcctctcgccccccagcctccctcactcctcct
gtcaccctgacacaaagcctgcccattcagaccccaccgatgggaccgcctgaggtgtca
atctctcctgaccccgcccctgaaccacaccgggcggagccacggcacttggccaatcac
aacgagccaccgccgccaggtgagatggaggcggggccttacatggtgtcagagccacca
atcagatcagccgacagcggacctcagggataccacatgcctatgattggtcaccctcca
cccataaggccctcccacccatcaggtccacctccacagccctcccattcccacagagga
ggacccagaccaccttgggacagaccctacagacctctttctgaccacatccccccccca
cgccacacccttccttccgccccaggcccagcccctcacctctacccgggccctaacctc
taccaccctccccccaacccccactccatcccgccccagtcctacccccctccttattcc
accggaccccctccccctgttaactacccccctcagcccctctacccacacggccagatg
cctccgggggttaatgccccctgggttccccctcccaatacccagccccactcgctgggc
cccccgcccctcctaccctccggaccccccctctccaaggaggacttctacagacagagg
agactccaacaggaacaggtaacgtccaagctggatgagttcactaaagactttgccaaa
gagctgatggaatacagacctgctcccaagagacggagacgctcctactccaggtctcgt
tcctacagtcgttctccgttcagccgttccccctactcccgatcccctcgctcccgctcc
aggtcttactcgtacacccccagtcgctcccgctcccgttccaggtcttacggacgctcc
cccttctccagacgcaacgggggccggggaggacgcagccgctcctacggccgctcgcca
cggtcccgctcacgctcccgttcctacggctaccgtcgctccggctctcctcgctcccct
ccgccttaccgaggtggtggtggtggtggggggggctgggaaggaggagacggagctgaa
ggaggaggaggaggggggtatcggcccaggtctcgctccccggggggctacaggaggagc
aggagtcctggaggggttagaggtcaccataagccccctcctcgagagccggctccttac
gagcctaaaggcggacctgacctgtctcccggcggcagggagcgctgggagagagacagc
tacagacagtgggagaaagagtacagggactggtacaacaagtactacaaagactacagt
acccagcatgcctcggtgcaccaccgcggtggccggggcagcagagagagggaccgcctc
acccctccgcctagagactactccccccaggggcgggtgaggaggggtgagcgaggggga
cctcccggaccccacagaactcaccacgccttgtccgctctgccctctgcctccatcaga
gggggcggaagtaaggaacgcacgcaggggggaaccaaaacgtcagagggcggaactaaa
actctgaaagggaagaaactgaagaaaaagaagaacggggaggagccggattcagccgac
caatcgctggacaggggagacgccacacccgtcagggacgagccaatggacgatctccac
accctgacccctagcaaagccccacccacctccaccaaggtctcgagcaataaggcagcg
ctgctgtccgctaaaacccctcccacctcgtccggccaatcagagaagagcaggaaggag
aaggtgggtaaggtgaaagtaaagacggagggaaaggtgaaaggagagaaggttaagaga
aagactggaggagaggcgacagtcacagcctctaaggtcaaagagtcttcagccgctaaa
ccaatcaaagcatccaaggtcaaaccggacgagccaatcaggagagagaaggggcggagc
acccctactgttcgaggaggtttggctaaactcccctgcccctgccccgccccctccccc
atcacccccacgacctccctaaacacctgggcgacgcccggggggggaggagagatccca
ttcacagtgtcggggtacgcccccctggtcgccccctccagcctgcacctccctccccag
cagagaagaggaggagggtggaggaaagggggagggggatggacagggggatgggggggc
ccccggctaagctccgccgcgccgagggtccgtatccccagagaggacttcctgccaagc
cttccctccgtcaaacccttcccccagaggagaataaaactgaacagagacctggggagg
aacagcagtatggcccgcccagaggagagaccagctccagctgctaatatcaccaccact
atcacctctactggagagagacctgctggtcctgagagaggaggagcagagagggacgga
gggacggagagggtggcggtgatggtggagcggaggtcgtctggcgagaggtcagaggtc
aggtctgttaggtccgagaggccgtcgtcaggggaacgtttgccggagagaggaggagga
ggaggaggaggaaggtcagtctctctagaccgcatgaccatcgcggaacgctcggccatc
gctaagaaacctgatgccgagccagagccagggtgctgtgtcaaaaccccgggaccccag
acccagaggagacccagtcccgtccagttccccagcccaggcagggagaggagggaccgt
gggaccggaggagtcctcatccagcctccaccccggtccaagtgggagagagaggaggag
gaggaggaagaggagcagcactcagcgtccagggagaatggggcgttggcggtttcctcc
tccgtgcccagagacgctctgaggagagaagtctcaccagcaccgcctagtggccaaagc
agggaggtgcagggtagtgtctctaaaacagccaacacagaggggaggagagggagggag
gaggggactagaaggagggaggaaggcagagggcttaaaaaggggcaggtgaacttcaga
aaaccagctaagaccgaatccagaggagtgaaggaggaaggaagaggaggggtagggagg
gaggagagtcgaggggcgggaccagagccaaggcgacagcgtctgtgttctgacctgggt
agagagacggacgaggcagccttcgtccccgactacagcgaaggggaggggtcagacggg
gagcggggcagtggcctgagccatagcccctctcacaacacccagagccccgcctcccag
agccccggcggctcccctagcaaccacagcggctccacggcgacggacaagaagaagaag
aagaaacacaagaaacataaaaaacacaagaagcacaagaagcattgtgccgacgtcgag
cctcccgtcgaaggaaggaaggaacacaaacacaagagcaagaagaagaagcacaggaag
actaaagaggaagagggaggaggaggaggaggaggggaggcagaggagaagactgggcag
gagtcagccaccatctga
DBGET
integrated database retrieval system
