Oncorhynchus keta (chum salmon): 118383983
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Entry
118383983 CDS
T09424
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118383983 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
118383983 (lrit3a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_1
Ig_2
LRR_5
ig
fn3
LRR_14
C2-set_3
LRRNT
V-set
New_glue
C2-set_2
Motif
Other DBs
NCBI-GeneID:
118383983
NCBI-ProteinID:
XP_035626243
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All DBs
Position
4:complement(58667639..58679985)
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AA seq
641 aa
AA seq
DB search
MHLLLYAHVFLCCFSVAHSFCPSQCTCVYHGRSDGTGTRSVLCDDPDMSDIPVNVPVDTV
KLRVEKTGVRRIPTEAFYYLNDLRYLWITYNSISSVDAAAFYNLKVLHELRLDGNLISTF
PWESLKEMPSLRTLDLHNNRLTSVAMEAIPYLVNITYLDISSNKLTTLSSDLVDIWPPFN
GKPVSSSLSQKVVLGLQDNPWICDCRISKLIELSKMSDTSVVLMDQFLSCSGPENLAGVM
FQRVELDQCLKPSVMMSATKITASLGSNVLLRCDATGYPTPTLIWTTSDGSPVNNTVVQE
SPGEGVRWSIISLNGISYKDDGEYSCKAKNFAGNAEAAISLSVAGYVATTMPPQRSNGET
GGSSPSTTSSAPTTDFSNSPSTLITTTTPATTTLPPVPTKKKLMPSNVQQKAPPKPSKIQ
QGSDRMLAADQSKKKDASKSIQDLEIVEETADSAVLLWTADGLPSDAPLTVVYSTYDDED
DSKRTMDTDAGSGKVLLEGLTSGMRYQVCLVAKGSAAGIDPCINFFTLDIVEDDAENQLL
MLISGIACAVALPVIGLLVYKILSLYCQGSVPGLDDELSEDTYLKFETLSMKQRTFNANP
SELWAHRQTEESQERMLLFSRSSIDSQMTYRSDSSRSEFLC
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcttctctacgcccatgtcttcctgtgctgcttcagtgttgcccattccttc
tgtccttcccagtgtacctgtgtttaccatggacggagtgatggaacggggaccagatct
gtgctgtgtgatgacccagacatgtccgacatccccgtaaatgtccctgtggatacggtc
aaactgcgggtagagaagacaggcgtgaggcgcatccccaccgaggccttctactacctg
aacgacctgcgctacctgtggatcacctacaactctatctcctctgtggacgctgccgcc
ttctacaacctcaaggtcctccacgaactgcggctggacgggaatctgatctccaccttc
ccctgggagtccctaaaggagatgcctagtctgaggacgctggatcttcacaataaccgc
ttaaccagcgtggccatggaggctatcccgtacctagtcaacatcacctacctggatatc
tccagcaacaagttgaccactctgtcttcggacctcgtggatatctggccgccgttcaat
ggaaagcctgtctcctccagcctgtcccagaaagtggtgctcggtcttcaggacaacccg
tggatctgcgactgcaggatctccaagctgatcgagctctccaaaatgtctgacacatca
gtggtactaatggatcagttcctgtcttgcagtgggcctgagaacctggccggcgttatg
ttccaaagggtggagctggaccaatgtctcaagccgtctgtcatgatgtcagccacaaag
attacagcctcgttgggcagcaatgtgcttctgcgctgtgatgccacgggttaccccaca
cctaccctaatctggaccacttcagatggctcacctgtcaacaacacagttgtccaggag
tctccgggagaaggtgtccgatggtcaatcatcagcctaaatgggatctcgtacaaagac
gacggggagtacagctgcaaggctaagaacttcgccggtaatgcagaggctgccatcagc
ctgtctgtggcaggttatgtcgctacaaccatgcccccacagaggtccaatggagagact
ggagggagtagcccatccacaacatcctctgctccgacaactgacttctccaactcccct
agcaccctgattaccaccaccaccccagccacgaccacactgccacccgttcccaccaag
aagaaactcatgcccagcaatgtgcagcagaaagccccacccaaaccatccaagatccag
caaggcagcgacaggatgctggcggcggatcagagcaaaaagaaggacgcttccaagtcc
atccaagatctcgagattgtggaggaaacggcggacagcgcggttctactctggacggca
gacggtttgccgagcgatgcccctctcaccgttgtgtactctacttacgacgatgaggac
gactccaaacggacaatggatactgatgccgggagtggcaaggtccttcttgaaggctta
acttctggaatgaggtaccaggtttgtctggttgccaagggaagtgcggcggggatagac
ccctgcatcaacttcttcaccctggacattgttgaggacgatgccgagaaccagctgctg
atgctcatcagcggcattgcctgcgccgtggctttacctgtcatcggtttgctggtctac
aagatcctctcactctactgccagggcagtgtgccaggtttggacgacgagctgtctgaa
gacacgtatttgaagtttgagacgctgtcgatgaagcagaggaccttcaacgctaatccc
agtgaattgtgggcccacaggcagaccgaggagtcccaagagaggatgctcctcttctcc
aggtccagcattgactcacaaatgacatacaggagtgacagttccaggtcagaatttctg
tgctag
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