Oncorhynchus keta (chum salmon): 118384050
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Entry
118384050 CDS
T09424
Name
(RefSeq) integrin alpha-6-like
KO
K06485
integrin alpha 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04382
Cornified envelope formation
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04514
Cell adhesion molecule (CAM) interaction
oke04518
Integrin signaling
oke04810
Regulation of actin cytoskeleton
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118384050
04514 Cell adhesion molecule (CAM) interaction
118384050
04518 Integrin signaling
118384050
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118384050
09142 Cell motility
04820 Cytoskeleton in muscle cells
118384050
04810 Regulation of actin cytoskeleton
118384050
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118384050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118384050
04515 Cell adhesion molecules [BR:
oke04515
]
118384050
04090 CD molecules [BR:
oke04090
]
118384050
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118384050
Exosomal proteins of breast milk
118384050
Cell adhesion molecules [BR:
oke04515
]
Integrins
Integrin alpha subunits
118384050
CD molecules [BR:
oke04090
]
Proteins
118384050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
118384050
NCBI-ProteinID:
XP_052368978
LinkDB
All DBs
Position
4:complement(66397054..66414441)
Genome browser
AA seq
1066 aa
AA seq
DB search
MSIQWLGLLVDLWFLLSCLPFHISAFNLDTDTKHVLRKNGDPGSLFGFSLALHHQLNPVN
KKLLLVGAPRAKSFTKIEVTGGIYQCELTTDSKSCERVKLDNYEFVKSKDVKDQWMGVRV
TSQGPGQSVMTCAHRYQEWSTNPDTPNLVFGQCYILGEDLHKSDAHRIWRRVICDDRKHI
KDKPKNPDWFGYCQQGHSAAFAKDNTSLLFGGPGAYQWKGIVRMESLDNLEVSNEEPCET
GDVDRLDRDLIPLLNNSYLGFSIDSGMALTKKGQLTIVSGAPRGGFSGEVAFLKRDPLAE
RSLSVENILKGPGLASSFGYDIAVVDLNADGWDDLAVGAPEFFLKEGVVGGAVYIYINNR
GRQWEKIEPVRLDGNKDSMFGLAVENIGDVNQDGYEDIAVGAPYDGVGRVYLYYGSSGGI
HKKTAQIITAESYNIRQFGFSLTGKIDMDGNHYPDLAVGSLSDSIFVYRARPVVNIREDL
RITPSTINMVAEHCDKHKCTFKARACFTYTAQPPSYNPKLTVNYAFEADAETRKQRRSSR
MAFLFQSQGVLELAGQGKEKCTETQLKLLGDIKDRLHSIPISVSVSLLNDSKTESKSPLP
ALTPILSLYEQSTATSEVIFINKGCGSDNICQSNLELQHRFCSRQKLLGQDVFTPLPSER
GIPVISAGDEDIALEVNVTNREGDDAHQSHLIIKLPDSLSFSSLYFNHISEVLVKCNPND
NGTLTDCELGNPFKRDAEVTFYVILSTSRISLSTTDVNVTLQLETTSVQKIQASEAKAKV
VFELHLQVFGLARPSQVSFGGAVKGESAMKSEDDIGTLVEYEFRIWNLGRPLKSFANASL
NIYWPKENAVGKWLLYLVQIHSEGIQNVPCSPLTEISPVQHIKGSRDNSRKRRDAHQEAF
SSEDGFSFLSKKRKYKTLTCSDELKCVEIRCPLLGLDSTAVVFLQARLWNSTFLEDYSSL
NYLDIVLDATLSLTDSAENIGLRKTEKSGTQVRLTVFPERKAAIWAKVAWWVIFLSVMVG
LLLLALLGFLLWKCIKYPVAKKYYVMQKNTEERHPIRGDSSLGPTA
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattcaatggttgggcctcctagtggacctgtggtttcttttgtcctgcctacca
tttcacatctcagctttcaatctggacacagacacaaagcatgttctgaggaaaaatggt
gatccaggaagcctgtttggattctccctggcactgcaccatcaactgaatcctgtcaat
aagaaactattgctggttggagcaccacgcgccaagtcatttaccaaaattgaagttacg
ggaggaatctaccagtgtgagctcaccactgattctaagagctgtgagcgtgtcaagctt
gacaattatgagtttgttaaaagcaaggatgtcaaagaccaatggatgggtgtacgagtg
acaagccaaggccctggtcaaagcgttatgacctgcgcacatcgataccaggagtggagc
accaatcctgacacccctaacctcgtattcggtcagtgctatatcctgggggaagatctc
cacaagagtgatgcccatagaatctggaggagggtgatctgtgatgacagaaaacacatc
aaggataagcctaagaatcctgattggttcgggtactgtcaacaaggtcattctgccgcc
ttcgccaaggacaacacatctctgctgtttgggggccccggagcttaccagtggaaagga
attgtgagaatggagtccctagacaaccttgaagtgtcaaatgaagagccctgtgaaact
ggggatgtggacagacttgaccgtgacctcatccctctccttaacaacagttatctagga
ttctcaatcgactctggaatggccctcaccaagaagggccagctgactatagtgtctggg
gcaccacgaggcggtttcagtggggaggtggcatttctgaagagagacccattggctgaa
agaagtctatctgtggaaaacatccttaaaggcccaggcctggcctcctcctttggctac
gacatagccgtggtggacctcaacgctgatgggtgggacgaccttgctgtgggggcaccc
gagtttttcttaaaagaaggggtggtcggaggggcagtgtacatctacatcaacaacagg
ggaagacagtgggagaagattgagcctgtccgtctggatgggaacaaagactccatgttc
ggtctcgcagttgagaacattggagacgtcaatcaggacggttatgaagatattgctgtg
ggggctccctatgatggtgtaggtcgagtgtacctttactatggttcctcaggtggaatc
cacaaaaagacagcacagattataacagcagaatcgtataatataagacaatttggattt
tctctgactggcaaaatagacatggatggcaatcattaccctgacttggctgttggatca
ctctcagattccatatttgtctacagggcaaggccagtagtcaatatcagagaggactta
cgaatcaccccaagtacaatcaatatggtggcagagcactgtgacaaacacaaatgtaca
ttcaaggcacgggcatgctttacctacacagcacagccgccatcctacaaccccaaactg
actgtcaactatgccttcgaggctgacgctgagacgaggaaacagaggcgttcctccagg
atggcgtttctgtttcagtcccagggagtcctggagctagcagggcagggcaaagagaag
tgcactgagacccaactcaagctattgggtgatatcaaggacagactgcacagcatcccc
atctctgtctctgtgtccttactgaatgacagtaagacagaaagcaagagtcccctgcct
gcacttactccaatactcagcctctatgagcagagtacagccacctcagaggttatcttc
ataaataaaggttgtgggagtgataacatttgccaaagtaacttggagctacagcacagg
ttctgttccagacaaaaactactgggtcaagatgtattcaccccactgcccagtgaaaga
ggtattccagtaatctctgctggagatgaggacatagctttggaggtcaatgtgaccaat
agggagggtgatgatgcccatcagagtcatctgatcatcaaactccctgactctctttca
ttctcatcattatacttcaaccacatttcagaagtactagtgaagtgcaaccccaatgac
aatggtacactgacagactgtgaactgggaaacccattcaaaagagatgctgaagttact
ttctatgtaatattgtccacttcccgcatctctctgagcacaactgatgtaaatgttacc
ttgcagcttgaaacgacaagtgtgcagaagatacaagcaagtgaagcaaaggccaaagta
gtttttgagctgcacctacaagtatttggactggccaggccctcccaggtcagctttgga
ggagctgtaaagggagagagcgccatgaaatcagaggacgatattggaacccttgtggag
tatgaattcaggatatggaatttgggcaggccactgaaatcctttgccaatgcgtcactg
aatatctactggcccaaggagaacgcagtggggaaatggctgctgtacctggtgcagatc
cacagtgaaggcatacagaacgttccctgctctccgctaacggagatcagtccagtccaa
catataaagggctctcgtgataattcaagaaaaagacgagatgctcatcaggaagcattc
tcatctgaggatggattctccttcctgtcaaagaaaagaaaatacaaaactctgacatgc
tcagacgagttgaaatgtgtagagatacggtgccctctgctgggtttggacagtactgca
gtggtgtttcttcaagctcgcctttggaacagtactttccttgaggactacagttcatta
aactacctggacattgtgctggatgccactctcagcttgacagactctgcagagaatatt
gggcttaggaagactgagaaatctggaacccaggtgaggctgacagtgttccctgagagg
aaggctgccatctgggctaaggtcgcctggtgggtcatcttcctctctgtaatggtagga
ctgctacttctggctctgctcggctttctgctgtggaagtgcatcaagtaccctgtggct
aagaagtactacgtcatgcagaagaacacagaggaacgtcaccccattagaggagactca
tctttgggtccaactgcatag
DBGET
integrated database retrieval system