Oncorhynchus keta (chum salmon): 118384058
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Entry
118384058 CDS
T09424
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04810
Regulation of actin cytoskeleton
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118384058
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118384058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118384058
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118384058
Factors involved in mRNA localization
Other mRNA localization factors
118384058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
118384058
NCBI-ProteinID:
XP_052370443
LinkDB
All DBs
Position
4:70597178..70652273
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgctctgtctaatgttgatctgttggaggagctg
cccctccctgaccagcagccctgcatcgaacctccaccttcatccatcatgtaccaggct
aatttcgacacaaactttgaggacaggaatgcgtttgtgacggggatagctcgctatatc
gagcaggctactgtccactctagcatgaatgagatgctggaggagggccatgagtacgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaacgag
cagcccaacagggtggagatctatgagaagactgtggaggtgctggaaccagaggtcacc
aagctcatgaagttcatgtacttccagcgtaaggccatcgagcgtttctgcggggaggtg
aagcgtctctgccacgctgagcggaggaaagactttgtctctgaagcctacctcctcacc
ctgggcaagttcatcaacatgttcgctgtgctcgacgaactcaagaacatgaaatgcagc
gtcaagaacgaccactctgcctataaaagggcagctcagttcctgaggaagatggctgac
cctcagtccatccaggagtcacagaacctctccatgttcctagccaatcacaacaggatc
actcagtgtctgcagcagcagttggaggtgattcctggctatgaggagttgttagcagac
attgtcaacatcagtgttgattactatgagaacaagatgtacctgacgcccagcgagaaa
cacatgctgctcaaggtgatgggttttggtctctatctgatggacggtaacgtcagtaac
atctacaaactagacgccaagaagaggatcaacctgggaaagatcgacaaattcttcaag
ctgcaggtggtgcctctgtttggagacatgcagatagaactatcacgttacatagagact
agcgcccactacgaggagaacaagtccaagtggacgtgtacccagagctccatctctccc
cagtacaacctgtgtgagcagatggttcagattcgtgatgaccacatccggttcatctct
gagctggctcgctacagtaacagtgaggtagtgaccgggtcaggcctggacagtcagaaa
tcagatgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtactcgtggaagttggtccacccgacagataag
ttctgtaacaaggactgtcctggcacagcagaggagtatgagagagctacacgttacaac
tacacctcagaggagaagtttgccctggtcgaggtcatcgccatgatcaagggactgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctgcaggactttgcccagatgaccctcagagagcctctacgtcaggccgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcaatccgtaagaccatctgtgactgggag
ggggctcgggagcctcccaatgacccctgtctcaggggggagaaggaccccaagggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccctcgagcacacagctgtacatggtt
cgtaccatgctggagtcgttgatagctgataagagtggttctaagaagactctacgcagc
agtctggatggacccatagtactggctatagaagacttccacaaacactccttcttcttc
acacacctgctcaacttcagcgaggcgctgcagcattgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagttgaccatgggtcgcaggatccagttccccatcgagatg
tccatgccctggattctcacagatcacattctggagaccaaggagccatccatgatggag
tatgtgttgtaccctctggacctctacaatgacagtggctactacgctctgaccaagttc
aagaaacagttcctctacgatgagatagaggctgaggtgaacctgtgcttcgatcagttt
gtctacaagctggctgaccagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggacaagcgtttcagggcagagtgtaaaaactatggtgtgatcatcccctaccccccc
tccaaccgttatgagacgctgctcaaacagagacacgtacagctcctgggtcgctccatc
gatctgaaccgtctgatcacccagaggatctcagcagccatgtacaagtctctggaccag
gccatcagtcgctttgagagtgaagacctcacctctattgtggagttggagtggctgatg
gacatcaacagactgactcatcgtctgctctcgaagcacatgaccctggacagcttcgac
gccatgttccgcgaggccaaccacaatgtgtctgccccctacggacgcatcacgctccac
gtcttctgggaactcaactttgacttcctccccaactactgctacaacggctccaccaac
cgcttcgtgcggactgccatcccctttacccaggagcctcagcgagacaagccggccaac
gtgcagccgtactacctgtatgggtctaagcctctgaacattgcctactcccacatctat
agctcctacaggaacttcgtaggcccgccccacttcaaaaccatctgccgtctccttggt
taccagggcatcgccgtggtgatggaggaactgctcaagatagtcaagagcctgttgcag
ggcactatcctgcagtatgtgaagactctgatcgaggtaatgcccaagatctgtcgcctg
ccgcgccacgagtacggatccccaggtatcctggagttcttccaccaccagctgaaggat
attatagagtacgcagagctgaagacggatgtcttccagagtctcagagaggtggggaac
gccatcctcttctgtctgctcatcgaacaagctctgtcccaggaggaggtgtgtgacctg
cttcatgcagctcccttccagaacatcctccccagggtctacatcaaagagggggagcgt
ctggaagtcaggatgaagaggctggaggctaagtatgctccactccatctggtgcccctc
attgagaggctggggacccctcagcaaatagctatagcccgtgagggggatctgttgacc
aaggagcgtctttgctgtggcctgtccatgttcgaggtgatccttacgaggatccgtagt
ttcctgcaagatgccgtgtggcgaggcccgccccccaccaatggcgtgatgcacgtggac
gagtgtatggagttccaccgcctctggagcgccatgcagtttgtttactgcatccccgtc
ggcactcacgagttcaccgcagagcagtgttttggtgacgggctgaactgggcaggctgc
tccatcatcgtgctgttgggtcagcagcgccgcttcgacctgtttgacttctgctaccac
ctgctcaaggtgcagaggcaggacggcaaggatgagatcatcaagaacgtgccgctgaag
aagatggctgatcggatcaggaagtaccagatcctgaacaatgagatctttgccatcctt
aacaagtacatgaaggctgtggagaccgatagttccaccgtggagcatgtccgctgcttc
cagccacctatacaccagtccctggccacaacgtgctga
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