Oncorhynchus keta (chum salmon): 118384075
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Entry
118384075 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118384075
04120 Ubiquitin mediated proteolysis
118384075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118384075
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118384075
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118384075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
FANCL_C
zinc_ribbon_16
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118384075
NCBI-ProteinID:
XP_052373198
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All DBs
Position
4:79679717..79692157
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AA seq
677 aa
AA seq
DB search
MHITNTKQQTNIQTSALTQQTGREYLHIKINFQFVKYFCAVDTAYTMVRAGLVTATSLAL
TGAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMRKIFFGQLRAAEM
EHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLAEDRVDFMERSPNIS
WVFHFRVFSLMVLLGILDFLFVNHACHSIITRGASVQLVFGFEYAILMTMVLTTFIKYTL
HTVHLQSDNPWDNKAVYMLYTELFTGFIKVLLYMVFMTIMIKVHTFPLFAIRPMYLAMRQ
FKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVTGAKKLPCNHIFHSS
CLRSWFQRQQTCPTCRMDVLRASNPNQPPTPAPAQPPAPAAPANAPVPGPPGNVGPGMMP
HFPPGLFPFWGPFPGAAPPAGAPGAPGATDTPGATETAQTQGAGTSHSTGASTVGAAPAP
GGPMPGFPFPSFPPPPFPSAPWLTMPPPPPPFVSSMPPPPPALSTMSEAELRELEQEGRR
GLEARLQCLHNIHTLLDAAMLNIHHYLTTVATLTPPQSETSSAAGEASGSSPPSTSAETQ
ENQENDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDQRDEEEGDGEEVGEDGEPNPSEL
RRRRLRKLETTPPPPDH
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcacataacaaatacaaaacaacaaacaaatatacaaacgagtgcattaacccaacag
acagggagggagtatttacatatcaagattaattttcaatttgttaaatacttttgtgct
gtagatactgcctacaccatggtgcgtgcaggcctggtgactgccaccagtctggctctg
actggagctgtgattgcccatgcctactttctcaaacaccagttctaccccactgtggtc
tacctcactaagagtagccccagtatggcagtgttgtacatccaggcgtttgtgttggtg
ttcctgttgggaaagttcatgcgtaaaatcttcttcggacaactgagagctgcggagatg
gagcatctgatagagcgatcctggtatgctgtcacagagacgtgtctggcctttaccgtg
ttcagggatgacttctctccccgcttcgtaggcctcttcaccctgctgctcttcatcaag
tgcttccactggctggctgaggacagggtggactttatggagagaagtcctaatatatcc
tgggtcttccacttcagggtgttctctctcatggtgttgctgggaatcctggacttcctg
tttgttaaccatgcctgtcacagtatcatcacccgaggggcctctgtccaactagtcttt
ggatttgagtatgccatcctgatgacaatggtgctcaccaccttcatcaagtacaccctc
cacactgttcacctccagagtgacaacccctgggacaacaaagcagtctacatgctctac
accgagctcttcactggtttcatcaaggtcctcctgtacatggtgttcatgaccatcatg
ataaaggtgcacaccttccccctattcgccatccggcccatgtacctggctatgaggcag
ttcaagaaagcagtaacagatgcaataatgtcacggcgagccatccgcaacatgaataca
ctttacccagatgccactcctgaagatctgctggcttcagacaacgtgtgtatcatctgt
cgtgaagagatggtgactggagccaagaaacttccctgcaaccatatcttccactctagt
tgccttcgctcctggttccagagacagcagacgtgtcctacatgtcgtatggatgtcctc
cgggcctctaaccccaatcagccccccaccccagcgcctgcccagccccctgccccagca
gcacccgccaacgcccctgtccctggtccacctgggaacgttggccctggaatgatgccc
cacttccccccagggctgtttcctttctgggggcccttccctggagcggccccccctgct
ggtgctcccggtgccccaggggccacagacacccctggggccacagagacggctcagact
cagggcgctggtaccagtcattccacaggggccagtacagtcggtgctgctcctgctcca
ggaggccctatgcctgggttccccttcccctccttcccacccccgccgttcccctcagct
ccgtggctgactatgccaccaccacctccaccgtttgtgtcatccatgccccctcctccc
ccggccctgtccaccatgtcagaggctgagctgagggagctggagcaggagggccgtaga
ggcctggaggccagactgcagtgtctccacaacatccacactctactggacgctgccatg
ctcaacatccaccactacctcactaccgtcgccacgctcactcctcctcagtcagaaacc
agcagcgctgctggagaggccagcggatcatctcctccctccactagtgcagaaacccag
gagaaccaggagaacgactctcagagcagtacagccgctgaacctgaagctgtgaatggg
gccacaggtttctcccagccagactctaccacgttgggcgacagtgaagaccagcgggat
gaagaggaaggagatggagaggaagtcggcgaagacggagagcccaacccttcagagctg
aggcgccgtcgtctccgcaaactcgagaccacaccccctcctcctgaccactga
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