Oncorhynchus keta (chum salmon): 118384263
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Entry
118384263 CDS
T09424
Symbol
rnf25
Name
(RefSeq) E3 ubiquitin-protein ligase RNF25 isoform X1
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118384263 (rnf25)
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118384263 (rnf25)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118384263 (rnf25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RWD
zf-RING_11
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
VPS18_RING_C
zf-ANAPC11
zf-C3HC4
DUF1644
Motif
Other DBs
NCBI-GeneID:
118384263
NCBI-ProteinID:
XP_035626532
LinkDB
All DBs
Position
5:complement(2590271..2596727)
Genome browser
AA seq
544 aa
AA seq
DB search
MCDRQYTIEEEEEVVPVGRTKMAAESDVLSEIEVLQSIYLDELQINRRDWGWEVSLVLYP
STGEDSLSQFVRLTLTLTLDLQYPSSPPSISIHNPRGLSDDKLCSVQKCLQTEAESCLGS
PVLYQLIEKAKEILTESNIPHGNCVICLYGFKDGEAFTKTRCYHYFHSHCLGRYITHSET
ELQEREKELEQDKTRERTDDEELTVVCPVCREPLTYNVAQLLSNPAPSFPELEGAVIGVE
FRQKWAELQNLLECQKAKGGIIDTEAESNRFLIHINEPPPDLDNVTTDGNASPSQSLLSL
PPASTNQITAPKLQHAGHSHRRGRPGHQYWHQGPQGHFRGLRRGGRGRPHTHPGTPVPPT
DYLDKLSLSSEKHDNFHSAPPANSHDAPIKARLQENSSHPELGQAQLSQLEKEEGEGRTE
LGQQEAPVPKDGQPISKSSLDTPKMDIPPSNGMEMEPGRGHRERGRRRGPRGSAQQPDQW
QERYFRGTDQWDARGGRHHRYWDGRGQRSRGGANYPRGRAHMAGGRGFHQRVVEGEVERE
GAAL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgatcgccaatataccatagaagaagaagaagaagtagtcccggtcggcagaacg
aagatggcagctgaaagcgatgtgctgtctgagattgaggttctccagtccatctatctg
gatgagctgcagattaacaggagagattggggatgggaggtgagtctggttctatatccc
tccacgggtgaagattccctctctcagtttgtgcgactcaccctaactttgactctcgac
ttgcagtatccctcctctcctccctccatttccatccacaaccctcggggtctttctgat
gacaagctgtgcagtgtgcagaaatgtctgcagacagaggcggagtcctgcctgggttcc
cctgtgttgtaccaactcattgagaaagccaaagagatcctgacggagagcaatattccc
catgggaactgcgtcatctgcctttacgggtttaaggatggggaggcgttcaccaagacc
agatgctaccactacttccactcccactgcctaggccgctacatcacccactctgagact
gagctccaggagagggagaaggagctggagcaggacaagacacgggagaggaccgacgat
gaggagctaaccgttgtgtgtcccgtgtgtagagaacctctgacttacaatgttgcacag
ctcctgtccaatcctgcccctagctttccagagctggagggagcggtgataggggtggag
ttccggcagaagtgggctgagctccagaaccttttggagtgtcagaaagcaaaaggcggg
attattgacacagaggcggagtctaaccgcttcctcatacatattaatgagccgcctccc
gacttggacaacgtcaccactgacgggaatgcctctcccagccaatcactgctctccctt
ccccctgcctccaccaatcagatcacagcaccaaagctgcagcacgccggccactcgcat
cgcaggggaaggccaggtcaccagtactggcaccaagggccacagggccacttcaggggc
ctgaggaggggagggagaggcaggccccacacccacccagggacacctgtcccccccact
gactatctggacaaactctccctgtcctcagagaaacatgacaacttccacagtgctcct
cctgccaactctcacgacgcaccgatcaaagccagacttcaggagaactctagccaccca
gaactgggacaagcacagttaagccaattggagaaggaagaaggggagggacgtacggag
ctaggccaacaagaggctccagttcctaaagacggtcagccaataagcaaatcaagcctg
gacactcctaaaatggacatcccacctagcaacggcatggaaatggagcctgggcgaggc
catagggagaggggaaggaggagaggccctcgcggttcagcgcaacagcctgaccaatgg
caagagcggtatttcagaggaacggaccaatgggatgctcgggggggcaggcaccatcgc
tactgggacggacgaggtcagcgaagcaggggaggtgccaactacccccgtggcagagct
cacatggctggtgggaggggcttccatcagagagtggtagagggagaggtggagagagag
ggtgctgctctatga
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integrated database retrieval system
