Oncorhynchus keta (chum salmon): 118384384
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Entry
118384384 CDS
T09424
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118384384
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
118384384
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
Motif
Other DBs
NCBI-GeneID:
118384384
NCBI-ProteinID:
XP_052317334
LinkDB
All DBs
Position
1:complement(77184993..77265139)
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AA seq
1516 aa
AA seq
DB search
MAQCLQSVQEFIQDSFVPMVAVLCSEDAEKMTRKNNLNFSELLRPFCRLTSEGHMRDPNN
QVQVVKNLRISVNNVVKRPSVPTSGVHSPAQRRLLNEVVLASQPAEGGVANAITAGDYDL
NISDRSVKASVPWYSDWRDTLTELSTSKHYTATTPWFEAYRESFLQSMPASDHEFLNHYL
ACLLVVSSSEAVPVEQFLKLSQEQHMIQHNGEYTNPKWFIPNTLKYYVLLHDMSQGDEQR
ADSVYEDMKQRYGSQGCYLLKINSRTAAAGRDEQIPDPWSQYLNKSSLQSQDQSEEPAPT
PVVVNNTAVENNIGGAPEMDGAPEMDGHDSAENDGVFVNSLDNTHPLQLETAIDMPGSLD
SLRAVAMETKTTPVYTGVAAGTSHGACLTLNDHNRLRLFIQEFTFRGLLPHIEKNIRQLN
DQLVSRKGLSRSLFSVTKKLFGGGKVPEKSIAELKNTSGLLYHPEAPELQIRKMADLCFL
VQHYELAYSCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQGGAPRPYPAHYMDTAIQTY
RDVCKNKVLAERCALFSAEVLKSQAKYSDAATLLIKMTSEDSDLCSALLLEQAAHCFINM
RNPMVRKFAFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSF
TLRQPENAVLAFRHILTNDSQQTATQQGAFLREYLYVYRNVPGVCEVALPQLPLPCINSS
ATRVYFGHERRLAEGEKQAATHVSLDQEFDQDLAAVWQDLEEQVVAAANRGVVPSTFYPT
QCCLNSQTDNLHFPLAVVEEPIIVEVAFRNPLKVPLVLSDLSLLWKFTLKDFSRPQPQDV
MVGDAVTITNEKEAIAPRTVQKDGIITTEVIPEFFMSPEETRVARLKLLPRQTGQLTILG
LVYNLASTPSTGDSTINSNSFSQNQGPSATAGTLVRGRQDLEIQGPRLNQTKEEKTSVSH
GPDRRLDPTITPPMPLLEVFFLQFPTALLCGEIRKAYVEFCNVSHVPLCGLRVASTHPDF
FTFGSSSLATPLTPLSPSSFENCSAYKTLATPPGATPGSVTAVTLVSAADFGSGGGVVSG
TGGKRVAEIPLGEGTLTPGESTQVPLWLRGPDQEGVHEINFLFYYEGAEKGGKISHRVLR
HTVFICASRSLSVRATACHSNTLPEEEGRNGSMLVFIDVENINTSEAGVREFHIAQVSSS
SKQWRLHKCINPAENKDCKLTTRERGKLCFRATRCKPHEATSKSLEKYTFADLSLGNEQI
ISSTTPCADFFFRRCQPLESWRQLIAVETQGRHSRSQGAGPGGGAEDITGVVRKCNEVDL
DIIVLWKAYVVEDNKQVILEGQLHVALQTIGKEACSLRQKEEAQEMVLLKFKPELPPPIT
RPSMEQLSHLIKTNLHYPESYSHSFVQKSLCMVPVILTLSNCSLAQVDAIIDLRHKTTSP
ESLEVHGPFTWLGQTQYKLQLRAQEVMRLPLRAGFLYAGVYNLGTARVFAKLADQGAMCE
TSQQTATPALIIINST
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcctacagtctgtgcaggagttcatccaggactcgtttgttccaatggtg
gctgtcctgtgcagcgaagatgcggaaaaaatgactcgtaaaaacaaccttaatttctcg
gagctgttaagacctttctgccggttaacctccgaaggtcacatgagggaccctaacaac
caggtgcaggtggtgaagaaccttcgcatcagtgtaaacaatgtggttaaacgcccgtct
gtccccacctccggcgtccatagccccgctcagcgacggctcctcaacgaggtggtgttg
gcgagccaaccagcagaggggggtgtggccaatgccatcaccgctggagactatgacctt
aatattagtgatcgctctgttaaagctagcgtcccctggtacagtgactggagggacaca
ctaacggaactcagcacctccaagcattatacagccacgactccctggtttgaggcgtac
agggagagcttcctccagtcaatgcctgcctccgaccatgagttcctcaaccactacctc
gcctgtctgttggtggtgtcgtccagtgaggctgtaccagtggagcagttcctcaagctg
tctcaggagcagcacatgatccagcacaatggagagtacaccaaccccaagtggttcatc
cccaacacactcaaatactacgtcctcctgcatgacatgagccagggggacgaacagaga
gctgactctgtgtatgaggatatgaagcagaggtatggttctcagggttgttaccttctg
aagatcaactctcgtacagcagcagcaggaagagatgaacagataccggacccatggagc
cagtaccttaacaagagcagtctgcaaagccaggatcagtctgaggagccagccccaacc
cctgtagtggtgaacaacacggctgtagagaacaacataggaggagcacccgagatggac
ggagcaccagagatggatggacatgactcagcagagaatgacggagtctttgtaaacagt
ctggacaacacccaccctctccagctggagactgccattgacatgcccggtagcctggac
tccctcagggccgtcgccatggaaaccaagactacgccagtctacacaggagtggcggcg
ggcaccagccatggggcatgtcttacgctgaacgaccacaaccgcctaagactattcatc
caggaatttaccttcaggggactactacctcacatagagaagaacatcagacagctcaat
gaccagctggtctccaggaaaggcttgagtcgctctctgttctcagtcactaagaagttg
tttggaggagggaaagttccagagaagagtatcgctgagctgaagaacacttccggcctt
ctctatcatccagaagcccctgagctgcaaatcaggaagatggctgacctgtgtttcctg
gttcagcactatgagctggcctacagctgctaccacacggccaagaaggacttcttatct
gaccaggccatgctctatgccgctggagcgctggagatggcagcagtgtctgcgtttctc
caaggtggggctccacggccgtatccagcacactatatggacacggcaattcagacctac
agagatgtgtgcaagaacaaggtcctagctgagcgttgtgctctgttcagtgctgaggta
ctgaagagtcaggccaagtactctgatgctgctaccctcctcatcaagatgaccagtgag
gattctgatctgtgttctgccctcctattggagcaagcagcccactgcttcattaacatg
cgaaaccccatggttaggaagtttgccttccacatgatcctggcaggacaccgcttcagc
aaggcaggacagaagcgtcatgcattgcggtgttactgccaggccatgcaggtgtataag
ggtaaaggctggtccctggctgaggaccatatcaacttcactatcggccgccagtccttt
acgctgcgccaaccagagaacgctgtcttagccttcagacacatcctcaccaacgacagc
cagcagaccgccacacagcagggagccttcctccgggagtacctctatgtctacaggaat
gtgccaggggtgtgtgaggtggcactaccccagctacccctaccctgcatcaacagctct
gctaccagggtctacttcggccacgaacgccgcctggcagagggtgagaagcaggctgcc
acccatgtgtccttggaccaggagtttgaccaggacctagctgccgtgtggcaggacctc
gaggaacaggtggttgccgccgccaaccgtggggttgtcccgtcaacgttctaccctacc
cagtgctgcctcaacagtcagacggacaatctccacttcccgctggctgtagtagaagaa
cccatcatagttgaggtggcgttccggaaccctctaaaggttccgctggttctctcagac
ctctcgctgctctggaagttcacgctcaaagacttctctcgaccacaaccgcaggacgtc
atggttggagacgctgtcaccatcaccaatgagaaggaagccatcgctcccaggacagtg
cagaaagatggcatcatcaccacagaagtcatcccagagttcttcatgagccccgaggag
acaagagtggctcgtctgaagctgcttcctcgccagactggtcagctcaccatcctgggt
ctagtctataacctggcctccaccccttctactggagactctactattaacagcaacagt
ttctcgcagaaccaaggtccctcagcgactgcggggacattggttcgtggtcgacaggac
ctagagattcagggaccgcggttaaaccagaccaaagaggagaagacctctgtcagccac
ggtcctgaccgacgtcttgaccccaccatcacccctcccatgcccctgctggaggtattc
ttcctccagttccctactgccctactatgcggtgaaatcaggaaggcctacgtggaattc
tgtaatgtgagtcacgttcccctgtgcggcctgcgggtggcgtccacgcacccagacttc
tttaccttcggaagctcctccctagccacacccctcacccccctcagcccctcctccttt
gagaactgctctgcctacaagaccctggccacacccccaggagccacacccgggtcggta
accgcggtaacgctagtgtcggcggctgactttgggtcgggaggaggagtagtgtctggt
acggggggtaaaagggtagcagagatccctctaggagagggaacgctaacgcctggagaa
tctacccaggtgcccctgtggctaagaggaccagaccaggaaggagtccatgagatcaac
ttcctgttctactacgagggcgctgagaaaggaggaaagatcagtcacagggtgctgcgt
cacacagtatttatctgtgccagtcgttctctgtcggtccgggccaccgcctgccatagt
aacacactgcccgaggaggaggggaggaatggcagcatgctggtctttatcgatgtggag
aacatcaacacaagtgaggctggggtgcgtgagttccacattgcacaggtctctagcagc
agtaaacagtggagactacacaagtgtataaacccagcagaaaacaaagactgcaaactc
accaccagagagaggggcaagctgtgcttcagagcaacacgatgcaaaccccacgaagct
acctcaaagtcactagagaagtacacctttgcagacctgagccttggaaatgaacagatc
atcagctccaccactccgtgtgcagacttcttcttccggaggtgtcagcccttggagtct
tggagacagcttattgccgtggagacacaggggagacattccaggagtcagggggcgggt
cctgggggtggggctgaggatataacaggtgtggtcaggaagtgcaacgaggtggacctc
gacatcatcgtcctctggaaggcatatgttgttgaagacaacaagcaggtgatcttggaa
ggacagcttcatgtggcactacagaccattgggaaagaggcctgctccctcagacagaaa
gaggaggctcaagagatggtgctgctgaagtttaaaccagagcttcctcctcctataaca
cggccctccatggaacagctctcccacctcatcaagaccaacctgcactaccccgaaagc
tacagccactccttcgtacagaagagtctctgtatggttccagtcattttgactctatct
aactgctccctggctcaagttgatgccatcattgaccttcgacacaaaactaccagtcct
gagtctcttgaggtgcacggtccatttacatggctgggccagactcaatacaagctgcag
ttgagggcacaggaagtgatgaggctgccgctgagagccggcttcctgtatgcgggcgtc
tataacctgggaactgcacgggtcttcgccaagctggcggaccagggagccatgtgtgag
accagccagcagacggccacgcctgcactaatcatcattaacagcacctga
DBGET
integrated database retrieval system
