Oncorhynchus keta (chum salmon): 118384506
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Entry
118384506 CDS
T09424
Name
(RefSeq) F-box/LRR-repeat protein 20
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118384506
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118384506
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
F-box
LRR_At5g56370
LRR_8
LRR_RPS2
LRR_EndoS
F-box_4
Motif
Other DBs
NCBI-GeneID:
118384506
NCBI-ProteinID:
XP_035626992
LinkDB
All DBs
Position
5:10771090..10790902
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AA seq
436 aa
AA seq
DB search
MGKEVNGVSRSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLAL
DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFSQNCRNIE
LLSLNGCTKITDSTCNSLSKFCPKLKHLDLASCTSITNLSLKALSEGCPLLEQLNISWCD
QVTKDGIQALVRCCPGLKGLFLKGCTQLEDEALKHIGAHCPELVTLNLQTCSQITDEGLI
TICRGCHHLQSLCVSGCANITDAILHALGLNCPRLRILEVARCSQLTDVGFTTLARNCHE
LEKMDLEECVQITDGTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGSGPCAHDRLEVIE
LDNCPLITDASLEHLKTCHSLDRIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP
SVGGSRQRFCRCCILL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaggttaatggtgtttcgcggagccggtttgagatgttctcaaacagcgac
gaggccgtcatcaataagaagctgcccaaggagctgttgctacgaatcttctcctttctg
gatgtggtgacactctgtcgctgtgcccaggtctcacggtcgtggaatgtgctcgccctg
gacggcagtaattggcagaggattgaccttttcgactttcagagagatattgaggggcga
gtggtggagaacatctcgaaacgatgtgggggattcctgaggaagttgagtctgcggggc
tgtctgggggtgggggacagcgctctgagaaccttctcccagaactgcaggaatatcgag
ctgcttagtttgaatggctgcaccaagattactgacagcacatgtaatagcctaagtaag
ttctgtcccaagctcaagcacttggacctcgcctcctgtacctcaatcaccaacctgtca
ctcaaagcactcagcgagggctgtcctctgttagagcagcttaacatctcgtggtgtgac
caggtgactaaggatggcatccaggccttggtacgatgctgtcccggactcaaaggcctt
ttcctcaagggctgcacacagttggaggatgaagcactgaagcacattggtgcacactgt
ccagagctggtcactctcaacttacagacgtgttcgcagatcacagacgaaggtctcatt
actatatgccggggctgtcaccatctgcagtcgctgtgtgtctcaggttgtgccaacatc
acagacgccatcctccatgccttgggactgaactgcccgcgcctcagaatattagaggtg
gctcgctgctctcagctcacagatgtgggcttcactacactagcaaggaattgtcatgag
ctggaaaaaatggacctggaagagtgtgtgcagatcacggacggcacacttatccagttg
tccatccactgccctcgtctgcaagttctgagcctgtctcactgtgagctgattactgac
gatggcatcagacatctgggaagcgggccctgtgcccacgaccggctggaggtgatcgag
ctggacaactgccccctgatcacggacgcctcgctggagcacctgaagacctgccacagc
ctggaccgcatcgagctctacgactgccagcagatcacccgcgcaggcattaagagacta
aggacccatctacctaacatcaaagtgcacgcgtatttcgcccccgtcaccccacccccc
tcggttggggggagtcgccagagattctgtcgctgctgtatcctgctatga
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