KEGG   Oncorhynchus keta (chum salmon): 118384526
Entry
118384526         CDS       T09424                                 
Symbol
pnkp
Name
(RefSeq) LOW QUALITY PROTEIN: bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118384526 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oke01009]
    118384526 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oke03400]
    118384526 (pnkp)
Enzymes [BR:oke01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     118384526 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     118384526 (pnkp)
Protein phosphatases and associated proteins [BR:oke01009]
 HAD phosphatases
  Other HAD phosphatases
   118384526 (pnkp)
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     118384526 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6
Other DBs
NCBI-GeneID: 118384526
NCBI-ProteinID: XP_035627035
LinkDB
Position
1:38059828..38065821
AA seq 601 aa
MQQCTLVSASGARVPLADGRAVILGRGPETGVIDKKCSRHQVKLVACYADKEVLVTQLGP
NPSSLGSESLGRGQSGRLTQDRTLYLVNQSHPFRVQFSASNETSSSSSAQKGKAVERLKA
LDKTKGGKNDRGREVQSTVPKRSIQDFFASSPKKASKRPHSSEEXPQEKRRRTTGSDSGG
EDEAEKLAEEKLRQLQEMSKSASGASRDCVQQQASVSACSRSHWQQIGNLMLYTAVGVTG
STKIAGFDIDGCIITTNSGKVFPTSPDDWRILFPEIQPKLASLLKKGYKVVFFTNQMGIS
RGKLKPEDFKSKVETILKTLQLPVQVFVASGPGIYRKPVMGMWEHLCEKDNGGVAVDKSQ
SLYVGDAAGRPVNWAPGKKKKDFSCSDRLFALNLGLQFHTPEEFFLGWKDAPFSLPPFDP
RKCDSNARLYDPPSACLTSTKQEVIIAVGFPASGKSTFFHTHIVPKGYVYVNRDTLGSWQ
SCVSACERALKEGRSVVVDNTNPDLESRKRYVDVSQSLGVSCRCFNFSASLEQAKHNNRF
REMAPSTTKHLKVNDMIFHSYKKKFVAPSLSEGFSEILQIHFVPTFTDSQSEALFRQFSE
G
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgcagcagtgcacattagtcagtgcatccggcgctcgtgtcccactagccgatggccga
gccgtgatcctaggtcgtggtccagagactggagttattgacaagaagtgctcccgacac
caggtgaagctggtggcctgttatgcagacaaggaggtacttgtaacacagcttggcccc
aacccttcatccttgggcagtgagagtcttggtagaggccagtctggccgactgacccag
gaccgcaccctctacctggtcaaccagagccaccccttcagagtgcagttctctgcttcc
aacgaaacctcctcatcctcctctgcccagaaggggaaggctgtagaaaggttgaaagca
ttggataagacaaaaggaggaaagaacgacagagggagggaggttcaaagcacagttccc
aaacgcagcatccaagacttttttgcttcctctcccaagaaggcatccaagaggccacac
agttctgaggagnccccgcaggagaagcgtaggaggactacaggctccgacagtgggggc
gaggacgaggctgagaagcttgctgaggagaagctccgacagctccaggagatgtcaaag
agtgcttcaggggctagcagagactgtgtccagcagcaggcatcagtctcagcctgttct
cgaagccactggcagcagattggaaacctcatgctctacactgctgttggcgtcactgga
agcaccaagattgctggattcgacattgacgggtgtatcatcaccaccaattctggcaaa
gtgtttcccaccagcccagatgactggaggattctctttcccgagatccaacccaaactg
gccagcttattaaagaaaggctacaaggttgtgtttttcaccaatcagatgggtatatct
agggggaaactgaagcctgaggatttcaagtccaaagtggagaccattctgaagacatta
cagctccccgtacaggtctttgtggcgtctggtcctgggatctacaggaagcctgtgatg
gggatgtgggagcacctgtgtgagaaggataatggcggcgtggctgtagacaaaagccag
agtctctatgtgggagatgcagcgggacggcctgttaactgggctcctggcaagaagaag
aaggacttctcctgcagtgaccgactgtttgctctgaaccttggactgcagttccacact
ccagaggagttcttcctgggctggaaggacgcccctttcagtcttcctccatttgaccct
aggaaatgtgactctaacgcccgtctatatgacccgcccagtgcctgcctcacctccacc
aagcaggaagtaatcattgccgtgggtttccctgcttccgggaaatcaacctttttccac
acacacattgtccccaaaggttacgtgtacgtgaaccgggataccctgggctcttggcag
agctgtgtttcggcctgtgagcgggcattgaaggaggggcgcagcgtggtggtggataac
accaacccagaccttgagtctcgcaaacggtatgttgacgtcagccagagtttgggggtg
tcctgtcggtgcttcaacttctctgcctccctggagcaggccaagcacaacaacagattc
cgtgagatggccccctccaccaccaagcacctcaaagtcaatgacatgatcttccacagt
tacaagaagaagtttgtggcgcccagtctctcggaaggcttttcagaaatcctgcaaatt
cattttgtcccaacctttacagacagccaatcagaggccctcttcaggcagttctctgaa
ggctga

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