Oncorhynchus keta (chum salmon): 118384568
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Entry
118384568 CDS
T09424
Name
(RefSeq) zinc finger BED domain-containing protein 6-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118384568
04121 Ubiquitin system [BR:
oke04121
]
118384568
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
118384568
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118384568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Gly_radical
DUF659
DBD_Tnp_Hermes
zf-C2H2_12
DUF5371
Motif
Other DBs
NCBI-GeneID:
118384568
NCBI-ProteinID:
XP_035627094
LinkDB
All DBs
Position
5:16253837..16258770
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AA seq
648 aa
AA seq
DB search
MTEFKRAFSLVWDHFTLVTPNKVQCALCSQRLSFNKNTSAMLRHLRSRHPSEAWYSNSTS
GAHSSTSNSTSGVHSTFSNSIISSAGVHSSFSGTTGLNSMFTNNAAAGHHIQVRTTRQED
LDDALVNMLVKDTQPFSVVEEEGFAAFVQKLDPSYNLPNKQALKKMVGSRCEFINDNVVS
QMVISDFVSLTSDMWTSIDKHSYISVTGHLVAENAQLSTFLLGISKLPENHKVIHIEEAK
NQLVASWGLHSRVAAFVTENSENMVATVQKLGILQLPSFAHVLNLVIKRSMEATLELQDI
RSQARAIVSFFKSNQNAEMRLAEVQGQLGRPEQKLIQEVDSRWNSSFSMLERVFDQRESV
AAALSTLDTDIIPLGSADYEVIHQCLGVLGSFNQATAELASEKRVSASKVIPLVRMLKIT
LEKKHGAIIHPTATQLASNLQRELQTSCSMVETEPILALSALLDPRFKMLAFGNQGYAQE
AVKLLTSECASLIRINPDKDDTLPPSTTGSTTPSPTSPHTSWAMETASISMATSPSKSHD
GGLWEMFDSKVGETQSVQSSTADAAVEVQHYLSDPYLNRVENPMHYWEKHSKVYPHLFQL
ARKYLSVPASSVPCERIFTKAGDVFNKKRSCLSMKAVEQIMLLNKGLV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtttaagagagccttctcactggtgtgggatcacttcactctagtgacaccc
aataaggtccagtgcgccctctgttcacaacggcttagcttcaacaaaaacacctccgcc
atgttaaggcacctacgatcaaggcacccaagcgaggcctggtacagcaactcaacatct
ggagcccactcaagcacaagcaactcaacatctggagtccactcaacgttctctaactca
ataattagtagtgctggagtccactcatcgttctctggtactacaggactaaactcaatg
tttacaaacaatgctgctgctggacaccacatccaagtcaggaccaccagacaagaagac
ctggatgatgccctagtcaacatgttggttaaagacacccagccattttcagtagttgag
gaagagggattcgctgctttcgtccaaaagctagacccaagctacaatcttccaaacaag
caagcgctaaagaaaatggtggggtctcggtgtgaattcatcaatgataatgttgtatct
cagatggtaatttctgactttgtcagcctgacttcggacatgtggacatctatagacaag
cacagttacatttcagtgacggggcatttggtagcagaaaatgcccagttatccactttc
ctccttgggatttctaagctgcctgaaaaccacaaagtgatccacattgaggaggccaaa
aaccaactggtagcgagctggggcctccacagcagggttgctgcatttgtcacagagaac
agcgaaaatatggtagccacggttcagaaactaggaatcctccagttgccctcttttgca
cacgtcctgaaccttgtgattaagaggtccatggaggctactttggagctgcaggacatc
cgctcccaagcgcgggctatcgtgtctttcttcaagtcgaatcagaacgcagagatgagg
ttagccgaggtgcaggggcagctaggcaggccggagcagaagctgatccaggaagtggac
tcgagatggaacagtagcttttctatgctggaacgcgtctttgatcagagggagtctgtg
gctgctgctctcagcaccctggacacggacatcatccctctgggatctgctgactacgag
gtcatccaccagtgtctcggagtgttgggttccttcaaccaggccacagctgagctcgcc
tcagagaaacgcgtctcggcctccaaggtcattcctcttgtccggatgctgaagataacc
cttgagaagaagcacggtgcgatcatacaccctacggcaacacagctggcgtctaacctg
cagagggagcttcagacgagctgcagtatggtggagaccgagccaatcctggctctctct
gctctcctagacccgcgcttcaaaatgttggccttcgggaaccaaggctacgctcaggag
gcggtgaagctcctcacgtccgagtgcgcttcgttaatccggataaatccggacaaggat
gacactcttccgccgtccaccaccgggtcaacgacgccctccccgacatcaccccacacc
tcctgggcaatggaaaccgcttccatctccatggcaacatctccgtctaagtcccacgat
gggggtctgtgggagatgtttgacagtaaagtgggtgagacacagagcgtccagagcagc
acggcggacgcagcggtggaggtacaacactacctcagtgacccgtacctgaaccgagtg
gagaaccccatgcactactgggagaagcactccaaggtgtacccgcacctgttccagctg
gctcggaaatacctcagcgttcccgcctcgtctgtgccatgcgagcgcatattcaccaaa
gctggagatgtgttcaataaaaagaggagttgcctcagtatgaaggctgtagagcagata
atgctgttgaataaaggtctcgtatag
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