Oncorhynchus keta (chum salmon): 118384583
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Entry
118384583 CDS
T09424
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118384583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118384583
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118384583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
Tim54
CPSF100_C
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
118384583
NCBI-ProteinID:
XP_035627129
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All DBs
Position
5:complement(16897434..16902894)
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AA seq
636 aa
AA seq
DB search
MGLRNCLELQVPCVPRQPWSSKCLNVRTERETACVTDSAVLETTSYTQKFRICVLMATDA
VAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNTYGVEA
AQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLSDNAFG
PDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPLGLKVF
IAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRVLNLND
NTFTKKGAIAMAQALKHLRSIQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNLSFGEI
TGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDDLREVMDGLNMGDLLGSLSDDEGEPE
EEDDEDEEEDDEDEEEGDEDEEEGDEDEENDEDDVEEEEYSSVNQVSSPPSVPRSPDAAS
FLCFPSPDKLLKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEEDEQVKSAVLDSID
AILRKAFASPSFQGYNFVSSLLVMLGLLKSEDKVKPVHVVPGHLQALEYVVRQDYFPQDH
IAVLEAFMSRHVQALESCSSARNILKSTLEHFRPEN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggggctacgaaactgcctggaactacaagtcccgtgtgtcccgcgtcagccatggtcc
tcgaagtgtttaaacgtcagaaccgagcgggagacagcttgtgtgacagatagcgctgtt
ctggaaacaactagttatacgcagaaatttcgaatttgtgtcctgatggcgacggatgct
gttgcacagttggccgactctctggccaaaactcaggtgactgagggagagttgagttat
aaaggccaaggacgcaaatttgacaatgcacaatctgtggaagagatggtgaaagagatc
caggagttcaaggggttgcaagcactcaggctggaggggaacacttatggggtggaggca
gcacaggccatcgctaaggccctggagacaaagagtgaatttaagtactgttactggagt
gacatgtttactgggcgactgcgttctgagatccctccagccctgaactccctgggtgcg
gcgctaatgacagcaggcgccagactgaccgtgctggacctcagtgacaacgcctttgga
ccagacggggtgaagggcatcgagaagttgcttaagagcactgcctgtcacacactgcag
gaactgaggctcaacaactgcggcatgggcattggtggaggcaagatcttagctgcggca
ttgacggagtgctataagcagtccagtgcacagggcaccccccttgggctaaaggtgttc
atcgcaggcagaaaccgtctggagaacgatggggccactgcccttgcccaggccttccag
ctgatgggtagtctggaggaggtgcatgtgccccagaatgggatcaaccaccctggggtg
actgctctggccactgccatgcaacacaacccccagctccgggtcctcaacctcaacgac
aacaccttcaccaagaaaggagctatcgccatggcacaggctctgaaacatttgcgcagt
atccaggtgataaactttggagactgtctggtgcgttccgagggggctatagccatcgca
gaggcagtcactgaggggcttcccatcctcaaggagctgaatctgtcatttggggagatc
acaggagaagctgcactgctggtggcacaatcagttgagggcaaagccacactggagaaa
ctggacctaaatggtaactgcctgggggaggagggctgtgatgatctcagagaggtaatg
gatggcttgaacatgggagacctgctgggatcactcagcgatgatgaaggggagccggag
gaggaggatgatgaagacgaggaggaggatgatgaagacgaggaggagggtgatgaagac
gaggaggagggtgatgaagatgaggagaatgatgaagatgatgtggaggaagaagagtac
agcagtgtgaatcaggtttcctctcctccgtcagtgccccgatccccagatgccgcctcc
ttcctctgcttcccctcccccgacaagctgctcaaactgggcaccaagagggccctgctc
tttgaacagcaggtagatgtggctgatgctggtaagacagcggaggctttcctgaaaatc
tcctctgtgtacaatgaggaagatgaacaggttaagagtgctgtcctagacagtattgat
gcaattctcaggaaagccttcgcaagcccctccttccaaggttacaactttgtatcatcg
ctgttagtaatgctgggactcctcaagagtgaggacaaggtgaagccagtacatgtggtg
cctggtcatttgcaggccctggagtacgttgtgcgtcaggactacttcccccaggaccac
atcgctgtgctggaggccttcatgtcccgacacgtccaggccctggagtcgtgcagtagc
gccaggaacatcctcaagtccacgctggagcatttcaggcctgagaactga
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