Oncorhynchus keta (chum salmon): 118384654
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Entry
118384654 CDS
T09424
Name
(RefSeq) cysteine protease atg4da-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04136
Autophagy - other
oke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118384654
04136 Autophagy - other
118384654
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118384654
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118384654
03029 Mitochondrial biogenesis [BR:
oke03029
]
118384654
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
118384654
Membrane trafficking [BR:
oke04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
118384654
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118384654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
118384654
NCBI-ProteinID:
XP_035627249
LinkDB
All DBs
Position
5:19344620..19351366
Genome browser
AA seq
482 aa
AA seq
DB search
MAIRKRPPDSWTSPVVMNPSSPCEGQCPEGDPPDDWFHLSTMSLGTQGSDGSQDDPEEPE
ERGRLKSKLVSAWNNVKYGWSFKSKARFSKTSPLTMLGQSYLLSHGVERECFRQAFATLL
WLTYRRGFPQLDGSSLTTDSGWGCMLRSGQMLLAQGLLLHLLPPGWTWLSANHVSKDDME
VQESRSLGPEVTKKGRRKSIVSFLESRTEVTHRRVVSWFGDHPIAPFGLHQLVEQGTSAG
KKAGDWYGPSIVAHILRKAVDAASAEVSNLTVYVAQDCTVYIDDVVRLCERPLSEGSTGP
SPAWKSVIILVPVRLGGEVLNTTYIKCVKNLLRLECCIGIIGGKPKHSLFFVGYQDEQLL
YLDPHYSQSTVDITQDNFPLESFHCKCPRKISFSRMDPSCTIGFYAKSQKEFELLCSTVS
TALSSSTEKYPIFTIAEGQGQDGGQEDESDAPPNSITHILTKDKARLRRTNNSNSMDEFV
LL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaataaggaaacgacctccagacagttggacaagcccagtagtcatgaaccccagt
tctccctgtgagggccagtgccctgagggtgaccctccagatgattggttccacctttcc
accatgtctctgggaactcagggctctgatgggagccaggatgacccagaggaacctgag
gagagaggcagactcaagtccaagttggtgtcggcatggaacaatgtcaaatatggctgg
tcgttcaagtcaaaggcccgcttcagcaagacctctcctctgaccatgcttggacagtct
tatctgctcagtcatggagtggagagggagtgctttcgccaggcctttgccactctgctg
tggctgacgtacaggcggggcttcccacagctggatggttcctctctgaccacagacagt
gggtggggctgcatgctgcgcagtggacagatgctgctggcacaggggctgctgctacac
ctgctgccgccaggctggacctggctctctgccaaccatgtgtccaaagatgacatggag
gtacaggagtctcgctccttgggtccagaggtgactaagaagggaaggaggaagagcata
gtgtccttcctggagagccggactgaggtcactcacagacgggtggtgtcctggtttggg
gaccatcccatcgccccgttcgggctgcaccagctggtggaacagggcacaagcgcaggg
aagaaggcaggggactggtacggcccctccatcgtagcacacattcttcgtaaggctgtt
gacgcagcatcagcagaggtgtccaatctgacagtgtatgtagcacaggactgcactgtg
tacatagatgatgtggtgaggctgtgtgagagacctctatctgagggctccacaggaccc
agtccagcctggaagtctgtcatcatcctggtccctgtgcgcctgggaggagaagtcctc
aacaccacctacatcaaatgtgtcaaaaatctcctgaggttagaatgctgcattggaatc
attggtggcaaacccaagcactctctgttcttcgttgggtaccaagacgaacagctgctg
tacttggacccccactacagccagtccacagtagatattacacaggataacttcccctta
gagtcgtttcactgtaagtgtcccaggaagatctccttcagtcgcatggatcccagctgc
actataggcttctatgccaagagccagaaggaatttgagttactgtgttcaactgttagc
acggctctctcatcatcaacagaaaagtaccccatcttcaccattgcagagggtcaggga
caggatggggggcaggaggatgagagtgatgcacccccaaactctatcacccacatcctg
accaaggacaaggcgaggctgagaaggaccaataacagcaacagcatggatgagtttgtg
ttattgtga
DBGET
integrated database retrieval system
