Oncorhynchus keta (chum salmon): 118384801
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Entry
118384801 CDS
T09424
Symbol
pecam1a
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04148
Efferocytosis
oke04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118384801 (pecam1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118384801 (pecam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oke04090
]
118384801 (pecam1a)
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118384801 (pecam1a)
04091 Lectins [BR:
oke04091
]
118384801 (pecam1a)
CD molecules [BR:
oke04090
]
Proteins
118384801 (pecam1a)
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118384801 (pecam1a)
Lectins [BR:
oke04091
]
I-type lectins (Siglecs)
118384801 (pecam1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
Ig_C17orf99
I-set
V-set
Zwei_Ig_N
C2-set_2
AcfD_helical
Motif
Other DBs
NCBI-GeneID:
118384801
NCBI-ProteinID:
XP_052375000
LinkDB
All DBs
Position
5:20702795..20711006
Genome browser
AA seq
779 aa
AA seq
DB search
MDSPPLYLPLLLLTCLLTLWQGAGAQSLFTIDSVTLKLDPSGEVTSGTLMNLNCEVSVSH
DQSHPMTHSFNFLRDDVLVYSKNTTEFAALHQLNPARAANSGTYKCQVIVQDKSKSSRTH
RLTVTGLQTPVLQVTSQILFEGDEVAATCSAPDESGSLLFHFYQDQDKIKQVRAIGNSVG
TRLELKHAGDKHLRCYFEITMLPDAGRSNNSNTVKVMVKELFITPVMNILPGKDVIEGDI
VEFVCRVVNPPSNVTVFLNKDKRVLKTASISLSHSLRVLAEDSGEYVCKVERGNVQKEAY
ESIKVKELFSKPVLVMKPREVFETERFTLNCYTDRYSHERINIEDVKYSLYRNQVLLTSG
GNYSATAHPSLNGNYSCQAQAQGRGQTKKIFKNSTQIVLKAKVPVSVPLLSVVGGRLILG
KPFQLQCQSDNGSLPITYTLLSPHRQAEFRVVRRPWDLALFNITSIHRSSDIHSFSCKAE
NNPSQPYMESSGDHLRRTATIIEPVSRPVLTLTPKMGDVAEGEDLTLTCTVQRGTPPITY
TWYHTKSALPLLSKTTNDMRLSHSVQGVSREHGGGYYCVTNNPSNDSQRSAMVTVGVKLA
GWKKGLIAAFCILLTVSLIIIILVKKCLLPFRREGTVELSVKPASTKTDETLRLTHGEVN
EAANVTPGVMGRSVWSDHVSGSESDDQTSEETTEVPEPQYTEVHPQEVDPTRAPVKKGTD
TVYSEVRNSNQGESASEQADGQGSVEYAQLNHNDHESEEPEHEPRPEPEPEPEQGSERD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggactccccaccactctacctgcctctgctgctgctgacctgtctgctcaccctctgg
caaggggcaggagctcagtcattattcaccatagatagtgtgacactcaaactggaccca
agtggtgaggtaaccagtggaaccttgatgaacctgaactgtgaggtcagcgtcagccat
gaccagtcccaccccatgacacacagcttcaacttcctgcgagacgatgtcctggtctac
tccaaaaacaccaccgaatttgcggcacttcaccaactcaacccggccagggctgccaac
tctggcacttacaagtgccaggtcatagttcaagacaagagcaaaagcagcagaacccac
agactcacagtcacaggcttgcagacgcctgtgctgcaggtgacctcccagatcctgttt
gagggggatgaggtggcagctacctgcagcgccccagatgagtctggctccctgctcttc
cacttctaccaggaccaggataagatcaagcaggtgagggccattgggaactcagtgggg
accaggctggagctgaagcatgctggggacaaacacctgcgctgttactttgaaatcacc
atgctgcctgacgctgggaggtccaacaacagtaacactgtcaaggtcatggtcaaagaa
cttttcatcacacctgtcatgaacattcttcctggtaaagacgtgattgagggtgacatt
gtcgagtttgtctgtcgagtggtgaaccccccatccaatgtgacggtcttcctgaacaag
gacaagagggtgcttaagacagcctccattagtctcagtcattcgctcagagttctggca
gaggactctggggagtatgtgtgcaaggtggaaagaggcaatgtgcagaaagaagcctat
gagagcatcaaagtcaaagagttgttttccaagccagtcctggtgatgaagcccagagag
gtgtttgagacagagcgcttcacactgaactgttatactgaccgctattcccatgagaga
atcaacattgaggacgtgaagtactccctgtacaggaaccaagtcctactgacatcagga
gggaactacagtgccacagcacacccctcccttaatggaaattactcctgccaggcccaa
gcccaaggaagaggccaaaccaaaaagatcttcaaaaacagcacacagattgtcctcaag
gcaaaagtgcctgtgtcagtccctcttctgagcgtggtagggggcaggttgatcctgggc
aagcccttccagctccagtgtcagagtgacaatggtagtctgcccattacctacaccctg
ctgagcccccacagacaagctgagttcagggtggtccgcagaccctgggatctggccctc
ttcaacatcacctccatccacaggagctctgacatccacagcttctcctgcaaagccgag
aacaaccccagtcagccctacatggagagctcaggagatcacctccgacgcactgccacc
atcatagagccagtgtccaggccagtactgaccttgacacccaaaatgggggacgtggct
gagggggaggacctgaccctaacctgcactgtccagcggggcacgccccccatcacctac
acatggtatcacacaaagagtgccctgcccctgctgtccaagaccaccaatgacatgcga
ttatcccactcggttcaaggtgtcagtagagagcatggaggcggatactactgcgtcact
aacaacccatccaatgacagccagaggagtgccatggtcactgttggagtgaagttggct
ggctggaagaaggggctgatcgcagcattctgcatcctgctcacagtgtctctcatcatc
atcatcctcgttaagaaatgccttcttccattcagaagagagggaacagtggaactgtca
gtgaagccagcaagcactaaaacagacgagactctgaggctgacccatggagaagtcaat
gaggctgccaatgtcactcctggggtcatgggaaggagcgtctggagtgatcacgtctca
ggctcagagtctgacgaccagaccagcgaggaaactactgaggtacctgagccacaatac
actgaggtccatccccaggaggtagaccccaccagagcccccgtgaagaaaggcacagac
actgtgtacagcgaagtgcggaattcgaatcaaggtgagtcagcgtccgaacaagctgac
ggccaaggctcagttgagtatgcccagttaaaccacaatgaccatgagtcagaagaacca
gagcacgaaccccggcctgaaccagagccagaaccagaacaaggatcagaacgagactga
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