Oncorhynchus keta (chum salmon): 118384945
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Entry
118384945 CDS
T09424
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118384945 (cdx1b)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
118384945 (cdx1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Alveol-reg_P311
Motif
Other DBs
NCBI-GeneID:
118384945
NCBI-ProteinID:
XP_035627557
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Position
6:11495804..11502590
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AA seq
249 aa
AA seq
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MYVSYLLEKDTSMYPNSVRHPSLNLNHQNFVPAPPQYTDFSGYHQVPGINNDPHHSQTGA
WNPVYAPPTREDWSPYGPGTGPSTSNPGAIGYSPPEFSPVPQPGLLPSSINSSVGQLSPI
SQRRNPYDWMRRSAPPANLGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELA
TSLCLSERQVKIWFQNRRAKERKVNKKKMQQPQAASTTTPTPPSNVAMVTSSSGGLVSSS
LQMTIKEEY
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttatcttttggagaaggacaccagcatgtacccaaattcagtgcgacat
cccagcctaaacttgaaccatcagaactttgttccagcacctccgcagtatacggatttc
agcggataccatcaagttcctgggattaacaatgaccctcaccacagccagactggggcc
tggaaccccgtttacgcaccgccgacccgggaagactggtcgccctatgggccaggtaca
ggaccgtccacatcgaatccgggagcaattggctatagccccccagagttctctccagtc
ccacaacccgggcttctcccgtcgtctatcaactcatctgtaggtcagctctctcccatt
tctcagcgcagaaacccttatgattggatgaggcggagcgcgccaccggcaaatttaggt
ggtaagacacgaacgaaagacaagtaccgggtggtgtacacagatcaccagcgcttggag
ctggagaaggagtttcactatagccgctacattaccatcaggaggaaagcagagttggcc
acctctctctgcctctcagaacgacaggtgaaaatctggtttcagaatcggcgtgccaaa
gagaggaaagtgaacaagaagaagatgcaacagcctcaggcagcgtccacaacaacacct
actccacccagtaatgttgccatggtgaccagcagcagtggcggcctagtgtcttcatcc
ctacaaatgactatcaaagaagaatactga
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integrated database retrieval system
