Oncorhynchus keta (chum salmon): 118384952
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Entry
118384952 CDS
T09424
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118384952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118384952
Membrane trafficking [BR:
oke04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
118384952
Endosome - Golgi transport
Arf GTPase associated proteins
118384952
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
118384952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
Extensin_1
PH_6
Zf_1st_IFT121
Motif
Other DBs
NCBI-GeneID:
118384952
NCBI-ProteinID:
XP_035627565
LinkDB
All DBs
Position
6:complement(11805560..11827298)
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AA seq
1155 aa
AA seq
DB search
MSAPLGPDMPVPVPKPRTRYKRAGGSPQIQLSSDRDLIHDTPDTGIHSRGIPPANDLLAE
KEDNPAIILNKPAITSPAEQNPSQCNFLLFRSDSGVTPSYPVLDSNGLCPSVWLSFSPHS
PAVDTDPYISPAVDTDPYISPAVDTDPYISPAVDTDPYVSPAVDTDPYISPAVDTDPYIS
PAVDTDPYISPAVDTDPYVSPAVDTDPYISPAADTDPYISPAADTDPYVSPAADTDPYVS
PAADTDPYVSPAADTDTYISPAVDTDPYITDVADWEKCPGSGSESSNDDNAVTEEIKNTS
HMNNVASGHVCIGVVPSGKPPVEKESMQTRPLKQKIPRAATIRVSRRKQAAVSGGATQAA
ESSRRENVVSRSSWLDVWKGRRHNVLWATLDGPLVSFWKKRTDKFTDLVFHVSSITNVCK
QDKGRFSLYFCKKHFEFMAHNKAVQEGWVTSLLASRGWDPPAPPEQHGALTMKDPRSNRV
YAAICGHNLWIYNNKDDFQLGVGLTYVSMNVASVKQTGRHNFSLITPYKNFNFSTDSSRE
LAVWLGSLNQVILSALSCSEVAHRLWASPWNKVCADCGSANPEWASVNLLVVVCEACAGQ
HRSLGIHVSKVRSLKLDSKVWTEPLILLFVYYGNKAANDVWGHNVPGAEQILPDSSVDQR
GDFIRAKYTKGRYRFTHPLASSQRLLNQRLCEVVCGPNVPETMSLLCSGARVLCHSGDSQ
CPTPISLAERAGQAMQTELLRHNEYTDAPAYVHQVTGSLLGTSDPPSAAGEEELHGKLEE
DRFLFSQENDSAACDVLDLREVISIFHSPNGSTHEFEMVTLTDELVCNADTEEGLLNHLL
HILRVVLPEPIDEEELDGVFAVSRVSLREGGGLQHTEVWAVLRGGQVLVYPTDQQRHRER
LTLNPETQYKIDSSENTIELVTGERTMSMQFERDHSCQSWHSLLKRAVTTKRKQRPSLYE
LPPNAIGNVPPAIERCISHITQYGLKVDGLYRRCGLATKVSSLVEALSRSPKTAPLEKDE
QGLLDAAGALKQYVRQQVVLIPQTQRELWVKAAAHREENLRLATYRRLLKKLPPDNRITL
NALCGHFYIVQLYSVENRMTAQNLALVFVPTLFQELAMNTNMVRLTRELIIHHTLIFLGK
EQESDMESEELITKL
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccccctcggtccagacatgcctgtgccagtacccaaaccacggactcgctac
aagcgggctggagggagcccacagatccagctctcttctgatcgggatttgatacatgat
acacctgacacaggaattcatagcagaggtattccacccgcaaatgatttgctggcagaa
aaggaagacaaccctgccattatcctaaataagcctgccattaccagcccagcggagcag
aatccaagccagtgtaacttccttctcttcagatctgattctggagtgactccatcttac
ccagtactggacagtaatggactctgtccatctgtctggttgtccttctctccacacagt
ccggctgtggatactgacccctacatcagtccggctgtggatactgacccctacatcagt
ccggctgtggatactgacccctacatcagtccggctgtggatactgacccctacgtcagt
ccggctgtggatactgacccctacatcagtccggctgtggatactgacccctacatcagt
ccggctgtggatactgacccctacatcagtccggctgtggatactgacccctacgtcagt
ccggctgtggatactgacccctacatcagtccggctgcggatactgacccctacatcagt
ccggctgcggatactgacccctacgtcagtccggctgcagatactgacccctacgtcagt
ccggctgcggatactgacccctacgtcagtccggctgcggatactgacacctacatcagt
ccggctgtggatactgacccctacatcactgacgtagctgactgggaaaaatgccctgga
tctggatctgaatcgtccaatgatgacaatgccgttactgaagaaataaagaacacatcc
cacatgaacaatgtggcgtcagggcatgtttgtattggtgttgtccccagcgggaaacct
cctgtggaaaaggagtctatgcagaccagacctctcaaacagaagatcccacgtgcggcc
accatccgtgtcagcaggagaaaacaggcagcagtgagcggtggtgctacccaggcagca
gagtcctctcgtagggagaatgtggtgtcccgatccagctggctggatgtatggaagggc
cgcaggcacaatgttctgtgggccaccctggatggaccgttggtatcattttggaagaaa
cgcacagacaagttcacagacctagttttccatgtgtcaagcatcaccaacgtctgcaag
caggacaaaggacgcttctccctttacttctgcaagaagcactttgagttcatggcgcac
aacaaagcggtgcaggagggctgggtgacgtctctcctggcctctcgtggatgggacccc
ccagcccctccggagcagcatggagccctgaccatgaaggaccctcgcagcaacagagtg
tacgcggccatctgtggacacaacctatggatctacaacaacaaagatgatttccagttg
ggggttgggctgacctatgtgtccatgaacgtggcgtcagtgaagcagactggccgtcat
aacttcagcctcatcacaccgtacaaaaacttcaatttctccacagactcatcgagggag
ctggcggtgtggctggggagtctgaaccaggtgatcctcagtgccctgtcatgcagcgag
gtggcccaccgactctgggccagcccatggaacaaagtgtgtgccgactgtggcagtgcc
aaccccgagtgggcctcagttaacctgctggtggtcgtctgtgaggcctgtgcaggtcag
catcgctctttgggcatccatgtctccaaagtgagaagcctgaagttggacagtaaagtg
tggactgaacctttgattctgctatttgtctattatgggaacaaagcagccaatgatgta
tggggtcacaatgtgccaggtgcagagcagatcctgccagactcctctgtggatcagagg
ggggacttcatcagggccaagtacaccaagggccgatacagatttacccatcctcttgcc
tccagccagagactgctcaaccagaggctgtgtgaggtggtgtgtggccctaatgtccca
gagaccatgtcattgctgtgctcgggggcccgggtcctgtgccactcaggggactctcag
tgccccacgcccatctccctggcagagcgggctggacaggccatgcagacggagctgctt
agacacaacgaatacacagatgcccctgcctatgttcatcaggtcacagggtctctgctg
ggcacctctgaccctccttctgctgcaggagaggaggagctccatgggaagttggaggag
gaccgcttcctgttctcccaggagaatgactctgcagcctgtgatgttctggacctgagg
gaggtcatctccatcttccacagccccaacggatcgactcatgagtttgaaatggtgact
ctgacggacgagttggtgtgcaatgccgacactgaagagggtctactgaatcacctgctt
catattctcagggtggtgttgcccgagcccatagatgaggaggagctggacggggtgttt
gctgtgtcccgggtgtctctgagggagggaggaggcctgcagcacactgaggtctgggca
gtgctccgtggaggtcaggtcctcgtctatcctactgaccagcagcgccacagagagagg
ctaacactcaaccctgagactcaatacaagatagattcctctgagaacaccatagagctg
gtcactggagagagaaccatgtccatgcagtttgaacgagaccacagctgtcagtcctgg
cacagcctactgaaacgggcagtgaccacaaagaggaagcagcgcccatcactgtacgag
ctgccacccaacgccattggcaatgtgccccctgccattgagaggtgtatctcacacatc
acacaatatggcctgaaggtggatgggctgtaccggcgctgtggcttggccactaaggtc
agcagtctggtggaagccctcagcagatcacctaaaactgcccctctggagaaagatgaa
cagggtctcctggacgctgcaggggccctgaagcaatatgtccgccagcaggtggtgctc
atccctcagacacaaagggaactgtgggtcaaggctgcagcccacagagaagagaacctt
agactggccacctaccgcagactcctgaagaagctgccccctgacaacagaatcacactc
aacgccctgtgtggacacttctacatagttcagctgtacagtgtagagaaccgtatgaca
gctcagaacctggcgctggtgtttgtcccaacactgttccaggagctggccatgaacaca
aacatggtgcgtctcaccagagaactcatcatacaccacacactcatcttcctgggtaaa
gaacaagagtctgacatggagagtgaagaactcataacaaaattatag
DBGET
integrated database retrieval system
