Oncorhynchus keta (chum salmon): 118385148
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Entry
118385148 CDS
T09424
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03440
Homologous recombination
oke04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118385148
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118385148
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118385148
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118385148
03036 Chromosome and associated proteins [BR:
oke03036
]
118385148
03400 DNA repair and recombination proteins [BR:
oke03400
]
118385148
Peptidases and inhibitors [BR:
oke01002
]
Metallo peptidases
Family M67
118385148
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118385148
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
118385148
BRISC complex
118385148
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
118385148
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
118385148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF7385
Motif
Other DBs
NCBI-GeneID:
118385148
NCBI-ProteinID:
XP_052377008
LinkDB
All DBs
Position
6:18298201..18337392
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSSAATEAERLADMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRKIHSLTRLDPITKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNR
QSVIELQLVKERLTQELATM
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcgcagttcacctcgaatcagatgcctttttggtttgcatgaatcatgca
ttaagtaccgagaaggaggaagtaatgggactctgcatcggagaggtggacaccaaccgc
atcgtccacattcactctgttattattctgcgacgctcagacaagaggaaggatcgcgtg
gaaatctcgcctgagcagctatcttcagctgctaccgaagctgagaggttggctgatatg
actggacggcctatgcgtgtagttggttggtaccactctcacccccacatcactgtgtgg
ccatcacatgtggatgtaaggacacaggccatgtaccaaatgatggaccagggctttgtt
gggctgatattctcctgtttcattgaggataagaacacaaaaactggtcgagttctctac
acctgcttccagtctgtacaagcccagaaaggatctgagtacgagagaattgagatccca
attcatgtggtcccgcatgaggccattgggaaagtgtgccttgaatcagcagtggagctc
ccaagaatcctctgccaggaagagcaggatacctacagaaagattcacagcttaactcgc
ctggatccgatcacaaagatacacaatggctcagtgttcactaagaacctgtgcagtcag
atgtctgctgtgagtggtcccctgctgcagtggctggaggaccgtttggagcagaacaga
cagagcgtcattgagctgcagctggtgaaggagagactaactcaggagctggcaaccatg
tga
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