Oncorhynchus keta (chum salmon): 118385149
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Entry
118385149 CDS
T09424
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118385149
04082 Neuroactive ligand signaling
118385149
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118385149
Ion channels [BR:
oke04040
]
Ligand-gated channels
GABA-A
118385149
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Zip
Motif
Other DBs
NCBI-GeneID:
118385149
NCBI-ProteinID:
XP_052377011
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Position
6:complement(18415405..18554332)
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AA seq
476 aa
AA seq
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MAATLQKLAVFVSGIWICLLLLNPFPQTGAVVGHREPMPDDSRDNITIFTRILDRLLDGY
DNRLRPGLGAESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLP
LNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLED
FPMDTHACPLKFGSYAYTNNEVVYLWTKGDEGSVVVADDGSRLNQYDLLGHVIGKESMIS
STGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEAQE
MRRRESASLSKKANNTFNIVGTTYTLNEAKDPGLTTVSRSATTATHHQHHHHHHHHSHKV
PKMDDNYVEAIKSYNRVSRVDKISRIIFPVLFFIFNLVYWATYINSKPPPKSTAHN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactctccagaaacttgcagtattcgtgtcgggcatatggatctgcctcctg
ctcctcaacccctttccacaaaccggggcagtggttgggcacagagagccgatgcctgac
gacagtagagacaacatcactattttcacccggatcctggacagacttctggatggctac
gacaaccggcttcgccccggactaggagcagagagtgtgacggaggtgaggacaaatatc
tacgtgaccagctttggaccagtgtcagacacagacatggagtacaccatcgatgtgttc
ttccgtcagagctggagggatgagaggctgaagtttgacgggcccatgcaggtcctgcct
cttaataacctcctggccagtaaaatctggactccagacaccttcttccacaacggaaag
aaatctgtggcccacaacatgaccacgcccaacaaactgctacgactggtggacaacggt
accctgctttacactatgaggctgaccatccacgctgagtgtcccatgcacttggaggat
ttccccatggatacacacgcctgccctctgaagtttgggagctatgcgtatacaaacaat
gaggttgtctatctctggaccaaaggagatgagggctctgtagtcgtagcagatgatggg
tcaaggctaaaccagtatgacctactgggccacgttattgggaaagaatctatgatttcc
agcacaggagaatatgtagtgatgacaacgtatttccatttgaaaaggaaaattggctat
tttgtgattcaaacctaccttccgtgcatcatgactgtcatcctgtctcaggtctccttc
tggctaaacagagagtcggttcccgcccgcactgtattcggtgtcaccacagttctaacc
atgacaaccctgagtatcagtgccaggaactccctgcctaaggtggcttatgccacagct
atggactggttcatggcggtatgctatgcctttgtcttctctgccctgatagagtttgcc
acagtcaactactttaccaaacgcagttgggcgtgggatggcaagaaagaggcccaggag
atgaggagaagagaatctgcctctctttccaaaaaggccaataacacattcaacattgtt
ggaactacatacaccctcaacgaggcaaaggacccaggtttaaccaccgtctccaggagt
gccactacagctacacaccaccaacaccaccaccaccatcaccatcacagccacaaggtt
cctaaaatggacgacaattacgtggaagccataaagtcctacaaccgtgtcagcagagtg
gacaagatctctcgcatcatcttccctgtgctgttcttcatattcaacctggtctattgg
gccacgtacatcaacagcaagccgcctcccaagtccaccgcccacaattaa
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