KEGG   Oncorhynchus keta (chum salmon): 118385159
Entry
118385159         CDS       T09424                                 
Name
(RefSeq) period circadian protein homolog 1-like isoform X1
  KO
K21944  period circadian protein 1
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oke03400]
    118385159
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    118385159
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 118385159
NCBI-ProteinID: XP_035627950
LinkDB
Position
6:18832273..18841966
AA seq 1488 aa
MSDENAYTTSVNDTSGVGVEENVVGLKAGCQSPESGQSQTGSSGSSNGKRTRSGGKSSPK
SSNSDDTDAHSSGNDSAEREVEGHMGRETSTCSSSHNGKDSAMETTESKSANSHSSSPPN
SSMVYSLLSGSSEQDHPSTSGCSSDQPARLQTQRELLMALKELKIRMPADHGAKGRSSTL
ASLQYALNCVKQVRANQEYYHQWSVEESHGCSLDLSAFTTEELDNITSEYTLQNTDTFSV
GVSFLSGKVVYISPQASPMLRTKPNRLQGTLFSELLAPQDVSTFYSSTAPCRLPPWASCT
GSMTSPVDCTQEKSMFCRISIGRDSDGEVRYYPFRMTPYQLTLRDSDMSQPQPCCLLIAE
KVHSGYEAPRIPADKRIFNTSHTPGCLFQEVDERAVPLLGYLPQDLVGTPVLMYLHPDDR
PVMVAIHKKILQSAGQPIEHSPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRHKVR
TSPLNEDVFTPSMEVEVRAMSPEIPRLSEQIHRVLVQPVHSGVSQGYCSSHGSQPHRPSP
GSSGSSSPSTKGIIQMTIQRPQQMTFQQMCKDVHMVKTNGQQVFIKSRNRPPLRKHASAG
DLVTPENLNKDLGPIGALGPTKTLASVQSRKDPSANYSYQQINCLDSIVRYLESCNVPNT
VKRKCGSSSCTTSSTSDDDKQRELSGTAKDLEGSQGKEGSKGGPQMSPLALHCKAESVVS
LTSQCSFSSTIVHVGDKKPPESDIIMMMEETPPTTTPPAINNAITTAVTPRPSTFPSPAT
PSPALPERDSRRSAGCSGSLGLTKEVLSAHTQQEEQVFLSRFRDLGQLRMLDPGSPLRGH
TTTPKGVHTSKDYPAGGNGRRRGRGAKKPKHQQEGSQHGGRPKTGSGMNRSSRREGQGHQ
GPMFPMGQPLMRQGPLTSSSSWPTSVASLPPAVSQYPPGVLPFFPLYPNVQQQLLAHTGV
NPNAMQMGYPSPQPGFQYPLHANQISMPMAPPMMVVLPNYMFPQLNGGVPQLNQLNTAMP
QYNTAMPHLNPSIPGMAQLNQALPQFNQAIPLPQLNPVLAQFNPSGTQMNGMPLAQHNPS
QVHPALQVHPALSMIPQDFHNPNQTLPFPNPIPVPGLPCFALPRIDPTFFPRGNSRSSTP
QSTCQSPLEGTNSPLFQSRCSSPLNLLQLEELPGNRQEGMSTGAQQTPPPPGSSSQVGGQ
GSVNRSSNMKGDAKEYDNADVDNQDAMSTSSDLLDLLLQEDACSGTGSAASGSGSSGSGS
SGSNGCSTSGSDTRSSNTSKYFGSVDSSENDHKQAAGGAEEAQLMKYVLQNPIWLLMANT
DDKVMMTYQMPTRDRETVLRQDRMVLRAVQKRQPHFTEEQKRELIQVHPWMGTGRLPQAI
NNPTCTGCGSPPATSAPRTFDVELQDMDLTGVLQLQEEATAHTETHVTTATDTSISPPQA
PQTETKGGEAERQGEQEGNCKDTRVKELEVTSSSSVTEKGDSVAVNGN
NT seq 4467 nt   +upstreamnt  +downstreamnt
atgagtgatgagaatgcatataccacttctgtaaatgacactagtggagtaggtgtagaa
gaaaatgtggtgggactgaaggcgggctgccagtcccctgagtctggacagagtcagact
ggcagctctggtagctccaatggaaagagaactcggtctgggggcaagtcctcccccaag
tcctcaaactccgatgacaccgatgcccactcgagtgggaacgactcagccgaacgagag
gtggaaggtcacatgggacgtgagacatcaacctgcagcagctcccataacgggaaggac
tctgccatggagacaacagagagcaaaagcgccaactcccacagctcttcccctcccaac
agctctatggtctacagcctgctgagtggcagctcggagcaggaccacccgtccaccagc
ggatgcagcagtgaccagccagcccggctgcagacccagagagagctgctcatggctctg
aaggagctaaagatccgcatgcctgcagaccacggggcgaaaggccgctccagcaccctg
gcttccctgcagtatgctctcaactgtgtcaaacaagtccgagcgaatcaggagtattat
caccagtggagtgtggaagagagccacggttgcagtctggacctctctgccttcaccaca
gaggaactggacaacattacttctgaatacacactccagaacacggacacgttctcagtg
ggagtgtccttcctctctgggaaggtggtgtacatctccccccaggcctctcccatgctg
cgcactaagcctaatcgactccaggggacactcttctctgagctgttggccccccaggac
gtcagcactttctacagcagcactgctccctgccgcctgcccccctgggcctcctgtact
ggttccatgacctcccctgtggactgcacccaggagaaatccatgttctgccgtatcagt
attgggagggacagcgacggggaggtgcggtactaccccttccgtatgaccccctaccag
ctaaccctacgggactccgacatgtcccagccacagccctgctgcctgctcatcgctgag
aaggtgcactcaggatacgaagctccccgcatcccagcggacaagaggatttttaacact
agccacacccccggctgtctctttcaggaagtggatgaaagagctgtgccgttgctaggc
tacctgccccaggacctggttgggactcctgtcctcatgtacctccaccctgatgacagg
cctgtcatggtggccatacacaagaagattctccagtcagcggggcagcccattgaacac
tctcctctgcgtatgtgtgcccggaacggggagtatctcaccatagataccagctggtcc
tccttcgtcaacccctggagccgcaaagtggccttcatcgtgggtcgacacaaagtcaga
acgagtcccctgaacgaagatgtgtttacccctagtatggaggtggaggtgcgggccatg
tctccagagatccctaggctcagtgagcaaatccaccgtgtgctggtgcagcctgtccac
agtggtgtctcccagggctactgcagctcccatggatcccagccacacaggcccagcccg
ggctcctcaggcagcagcagcccctccactaagggtatcatccagatgactatccagaga
ccacagcagatgacattccagcagatgtgtaaagacgtccacatggtgaagaccaatggt
cagcaggtcttcatcaagtcccgcaaccgcccaccgctccgcaaacacgccagcgctgga
gacctcgtgacgccagagaatttaaacaaagacttgggacctattggcgctctggggcca
actaaaaccctggcctctgtgcagtcaaggaaagatccgtcagccaactactcctaccag
cagatcaactgtctggacagcatcgtacgctaccttgagagctgtaacgtccccaacaca
gtgaagaggaaatgtggctcctcctcctgcaccacatcatcaacgtcagacgatgacaag
cagagggagttgtctggaacagctaaagatctcgaagggtcacagggtaaggaagggtct
aaaggggggccacagatgagtcctctggcgctgcactgcaaggctgaaagtgtggtctcg
ctcacgtcccaatgcagcttcagcagcaccatcgtccatgtaggggacaagaagccccca
gagtcagatattatcatgatgatggaggagacaccacccaccaccacccccccagccatt
aacaacgccatcaccacggcagtgaccccccgtccctcaacctttcccagcccagcaaca
cccagccctgccctgcctgagagggatagccgcaggtcggctggatgctcaggcagcctg
ggtctgaccaaggaggtgctgtctgcacacacccagcaggaggaacaggtgttcctgagc
cggtttagggacctgggacagctccgcatgctggaccccggttctcctctgagaggacac
accaccacacccaaaggagtgcacacctcgaaggactacccagcaggtggtaacggacgg
aggaggggccggggggccaagaagccgaagcaccagcaggagggctcccagcacgggggc
cgtcccaagacaggctcagggatgaacagaagttccagaagggaagggcaggggcaccaa
ggccccatgttccccatgggtcaacccctaatgagacagggacctctgacctcgtcctct
tcctggcccacctctgtggccagcctccctcctgccgtgtcccagtaccctccaggagtc
ctgcccttcttccccctctaccccaacgtgcaacaacaactcctggcccacaccggggtg
aaccccaatgccatgcagatgggttaccccagcccccagccaggcttccagtaccccctg
catgccaatcagatttccatgccaatggctcccccgatgatggttgttctgcccaactac
atgttccctcaactcaatggaggtgtaccacagctcaaccagctcaatacagccatgcct
cagtataacacagccatgcctcaccttaaccccagtatccctggtatggcacaacttaac
caggcactaccacagttcaaccaggctattccactaccacaactcaatcctgtcttggct
caattcaacccttctggaacgcagatgaatggcatgcctctagctcaacacaacccgtca
caggtccatcctgcattacaggtccatcctgctttgtcgatgatcccacaagattttcac
aatcccaaccaaacattacctttcccaaatcccattccggtgcccgggcttccttgcttt
gccttacccaggattgatcccacttttttcccacgtggcaactctcgctccagcacccct
cagtccacatgccaatcccccctggaggggaccaactcgcccctcttccagtcacgatgc
tcctcccccctcaacttgctgcagctggaggagttgccaggcaacaggcaggagggcatg
tcaacaggggcgcagcagaccccacccccacctggctcgtcgtctcaggtcggaggtcaa
ggctctgttaaccgcagcagcaacatgaagggtgatgccaaagagtacgataatgctgat
gttgataaccaggacgccatgtccacctccagtgacctgctggaccttctgctgcaagag
gacgcctgctcaggcactggctcggctgcctctggctccgggtcctctggctccgggtcc
tctggctctaatggatgcagcacctcagggagtgacacaagaagcagcaacaccagcaag
tactttggcagcgttgactcatcggagaacgaccataagcaggcagcaggcggggctgaa
gaggcccagctcatgaagtatgtccttcagaaccctatctggctcctcatggccaacacg
gatgacaaggttatgatgacgtaccaaatgcccaccagggacagggagactgttctaagg
caagatcgtatggtactgagggcggtgcagaaacggcagccgcacttcactgaggagcag
aagagagagctgatccaggtccacccctggatgggcaccggacgcctgccacaggccatc
aacaaccctacttgtaccgggtgcggttctcctccagctacctccgccccccggaccttt
gatgtggagctgcaggacatggatctgactggggtcctccagctacaggaagaggctacc
gcacacacagagacacatgttaccacggcaacagacacttccatctctccaccacaagcc
ccccagacagagactaaggggggtgaggctgagaggcaaggggagcaggaaggaaactgt
aaggacaccagagtgaaggagttggaggtaacatcctcatcatctgtaacagagaaaggg
gactctgtggctgtaaacggcaactga

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