Oncorhynchus keta (chum salmon): 118385208
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Entry
118385208 CDS
T09424
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118385208 (smarcad1b)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118385208 (smarcad1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HHH_3
PRM2
CUE
Phage_N4_Gp2
T2SSK
Motif
Other DBs
NCBI-GeneID:
118385208
NCBI-ProteinID:
XP_035628049
LinkDB
All DBs
Position
6:20242985..20257862
Genome browser
AA seq
943 aa
AA seq
DB search
MNQRRFINHNTDSVNEDLTGQQTHDTVVPETPELKRPPGPGSVRGMESVVLDSDSDEEIS
GSSMMLSGKSLEKEPVMGSVIILSDEEGEEMKTTPRRNGSQLPQNIPGSQDPDRKRRLEV
CDSSQQSGASNSSKKPALEEDSVTDDSEDEGPEPSWKSQEDMVRKLQTKFPRLVKEELRE
VLLEQDWHFEDTLEALRMFSDEGERSSQGDTQASSSASSAPQASAHQAGPAAKPPGCPTS
LPHKPPSGTADKTISRLTKGADRRRRVIPESGTSSEDEASDDFDDSAEGVELNSDGSDQE
VGTGSLVKGQILRFFQEASLDELSLISGCSVKKAQRIVELRPFNEWENLLDALDKGNGLS
TDLVQGCRVVLREWDVVRSLMTKCEKIANKMMQDVTQVVERDKGSQKQPEILNGKYQLKP
YQLIGQNWLTLLHQNNLSGILADEMGLGKTIQAISFLASLYQEGNKGPHLLIVPASTLDN
WVRELNLWCPRLKVLVYYGSVEDRKYLRYDILNRQVDYNIIISTYALTTSNDNDRSLFRK
LKLEYAVFDEGHMLKNMSSLRYRHLMAINAKYRLLLTGTPVQNNLLELMSLLNFIMPDMF
SSSTAQLANMFAMKSSEERSSFEMERISHAKLIMKPFILRRVKSEVLKQLPAKEEKVEFC
AMSDQQQQLYNALMQKLKGSTNGEKRELTNVMMQLRKMANHPLLHREHYTTTKLAAMSQL
MLKEPTHCEADPALIKEDMEVMTDFELHRLCLQYPSVQDYQLNTDMLLDSGKLSLLTQLL
ASLKNMGDRVVLFSQFTMMLDILEVFLKHLKHHYIRLDGSTPMSDRIVLIDQYNTELDIF
VFLMSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRTVKVIKLISKDSI
EDGMLRIGQKKLKLEQDMTASQDGDEDSIPEDMASLLKASLGL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaagaagatttatcaaccataacacagactcagtgaatgaagatctcacgggg
caacaaacacatgatactgttgtcccggagaccccagagctcaagcgtcccccagggccc
ggctcagtgagaggcatggaaagcgtggtactagactctgattcagatgaggagatatca
gggtcttccatgatgttgtcggggaagagtctggaaaaggaaccagttatgggttctgtt
atcatactgtcagatgaggagggagaggagatgaaaactactccacggagaaatggcagc
cagctcccccaaaacataccaggaagtcaagacccagaccggaagaggagactagaggtg
tgtgacagctcccagcagagtggggcatcaaactccagcaagaaaccagcccttgaggag
gattcagtgacagatgattctgaggatgagggtccagagcccagctggaagagccaggag
gacatggtgaggaaactgcagactaagtttccccgtctggtcaaggaggagcttagagaa
gtgcttctcgagcaggattggcactttgaggacaccctagaagcactgcgcatgttttca
gatgagggggagaggtccagtcaaggggatacccaggcatcatcatcagctagttcagcc
ccccaagcctcagcacatcaggcaggcccagcagccaaaccccctggttgtcccacatca
ctacctcacaagcctcccagtgggaccgcagataagaccatcagtaggctgaccaaagga
gcagacagaaggaggagggtgataccagagtcaggcaccagctctgaagacgaggccagt
gatgactttgatgactctgctgagggcgtggagctgaactcggatggctcagatcaggag
gttggaacagggtctcttgtgaagggccagattctcaggttcttccaggaggcatcgctg
gatgagctgtctctcatctctggctgctctgtgaagaaggcccagaggattgtcgagctg
cgcccatttaacgagtgggagaatctgttggatgctcttgacaaagggaacggcctctcc
actgacctggtgcagggctgccgtgtggtcctaagggaatgggacgttgtgcgcagcctc
atgaccaagtgtgagaaaatcgccaacaagatgatgcaggacgtgacccaagtggtggag
agggacaagggctcccagaaacagcctgagatcctcaacgggaaataccagttgaagcct
tatcagctcattggtcaaaattggctgaccctgctccatcagaacaacctgagtggaatc
cttgctgatgagatgggtttggggaagaccatccaggccatctcgttcctagccagcctg
taccaggagggcaataagggcccacatctcctcattgtacctgcctccacactggataat
tgggtgcgggagctgaatctgtggtgtcccaggctcaaagtcctggtgtattatgggtct
gtggaggatcgcaagtaccttcgatatgatattctcaacagacaggtcgactacaacatc
atcatttctacgtacgctctgaccaccagcaacgacaacgaccgcagcctgttccgaaag
ctcaaactggagtacgccgtgttcgatgagggccacatgctgaagaacatgagctcgctg
cgctaccgccacctcatggccatcaatgctaagtaccgtctgctgctgactgggactcca
gtgcagaacaacctcctggagctcatgtccctgctcaacttcatcatgcccgatatgttc
tccagcagcactgcacagctcgccaacatgtttgccatgaaatcatcagaggagcggagc
agctttgagatggagaggatctctcatgccaaactgatcatgaaacccttcatcctcaga
cgtgtcaagagtgaggtgctgaagcagctcccagccaaagaggagaaggtggaattctgt
gccatgagtgaccagcagcagcagctctacaatgccttaatgcagaagctcaagggatcc
accaatggagagaagcgagaactgaccaatgtgatgatgcagttgaggaagatggcaaat
cacccactgctgcaccgggagcattataccactaccaaactggctgctatgagtcaactc
atgctcaaggagccgacccactgtgaagcagacccagcactgatcaaggaggacatggag
gtcatgacagactttgagctgcatcgactttgtcttcagtacccgtccgtacaagactat
cagctgaacacagacatgctcctggactcagggaaactcagcctgctcacacagcttctg
gcctctctcaaaaacatgggggatagagtggtgctcttcagccagttcaccatgatgctg
gacattctagaggtgttcctgaagcacttgaagcatcactacattcgactggatggatca
acgcccatgtctgacagaatcgtgctgattgaccagtacaacacagagttggacatcttt
gtgttcttgatgtctactaaggctggtggcctgggcatcaacctgacctcagccaatgtg
gtcatcttgcatgacattgactgcaacccctacaatgataagcaggccgaggaccgctgt
caccgtgtcggacagacgaggactgtgaaggtgattaagctgatcagtaaggactctata
gaggatggcatgctccgcatcggtcagaagaaactcaagctggagcaggatatgactgct
tcccaggacggagatgaggactcgataccagaagacatggcctcccttctgaaggcgtca
ctggggctgtga
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