Oncorhynchus keta (chum salmon): 118385295
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Entry
118385295 CDS
T09424
Name
(RefSeq) far upstream element-binding protein 3 isoform X6
KO
K13210
far upstream element-binding protein
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118385295
03041 Spliceosome [BR:
oke03041
]
118385295
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118385295
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118385295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
KH_Vigilin
FUBP_C
Motif
Other DBs
NCBI-GeneID:
118385295
NCBI-ProteinID:
XP_035628213
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All DBs
Position
6:26529787..26557007
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AA seq
560 aa
AA seq
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MMMMAELVQGQASVAQPGTKADGFADALHRARQIAAKMGGDQMPHMNNSSPVLDPSLYGY
GGQKRSMDDGVGNQLGGMVHQRAIMTEDFKVPDKMVGFIIGRGGEQITRIQLESGCKIQI
AADSGGMMDRACTLTGSPENIEQAKRLLSQIVDRCRNGPGFHSEMDSNSAIQEILIPASK
VGLVIGKGGDTIKQLQERTGVKMMMIQDGPMPTGADKPLRITGDPYKVQQARELVVEIIR
DKDQGDFRASRGDFGSRLGGSSLDVAVPRFAVGIVIGRNGEMIKKIQNDSGVRIQFKPDD
GISPDRIAQVMGQSDRCQHAVHLINELVQTAQERDGFGSPVGPRGRGRGRGDWNMGAPGG
LQEVTYSIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIFSIRGTHQQ
MEMARQLIDEKIGASGMGGNSSFGLNPFGQGPTTPHQNGPQTFLTGGWGTTYQTWQAPGQ
QDPSQQSQAQSSGSDYSKAWEDYYKKQSQAAGPGSQQSSPPDYSAAWVEYYRQQGAYYGQ
GAQQTPAPGLQRGHPLVEDF
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagttggtacagggacaggcctcggtggctcagcctggaacgaaa
gcagatggcttcgccgacgctttacaccgggcccgacagattgcggcgaagatgggaggt
gaccagatgccccacatgaacaactcttctccagtcctagacccctctctctatggctac
ggaggccagaagcgctcaatggatgatggagtaggtaaccagctgggtggaatggtacat
caaagggctattatgacagaagacttcaaagtgcctgataagatggttggattcatcatt
ggaagaggaggagagcagatcacgagaattcagttggagtcaggctgcaagattcagata
gctgcagacagcggcggcatgatggacagggcctgcaccctaaccggaagtccagagaac
attgagcaggccaagaggctgctgagtcagattgtggaccggtgtcggaacggcccgggg
ttccacagcgagatggacagcaacagcgccatccaggagatcctcatccctgccagcaaa
gtgggcctggtcattggcaagggaggggacaccatcaaacaactgcaggagagaaccggt
gtgaagatgatgatgatccaggatggccccatgcccactggagcagacaaacccctgaga
atcactggggacccctacaaagtccagcaagcacgagagctggtggtggagatcatccgg
gacaaggaccagggagacttccgggccagcaggggagactttggatccagactgggggga
agcagtctggatgtggcagtccccaggtttgctgtgggcatcgtcattggcaggaacgga
gagatgatcaagaagatccagaatgactctggggtcaggatccagttcaaaccagatgat
ggcatcagtcccgaccggattgcccaggtgatgggccagtctgaccgttgccagcatgca
gtgcatctcatcaacgagctggtccaaacggcacaggagagggatggctttgggagtccc
gtggggcccagaggccggggcagaggccgcggagactggaacatgggtgcgcctggtggc
ctgcaggaagtgacgtactcgatacctgccgacaagtgtggcctggtgattggaaaaggt
ggcgaaaccatcaagaacatcaaccagcagtccggagcgcacgtggagctgcagagaaac
ccgccacctaacactgaccccaacgtgcgcatcttctccatccgcggcacccaccagcag
atggaaatggcccgccagctgatcgatgagaagattggggcctcaggaatggggggcaac
agcagttttggtctgaacccatttggacaaggaccaactaccccgcatcagaatggaccc
cagacattcctgacgggaggatggggcacaacatatcagacatggcaggctccgggccag
caggaccccagtcagcagagccaagcccagagcagtggctctgactacagcaaagcatgg
gaggattactacaagaaacagagccaggcagcaggccccggctcccagcagagctcccct
ccggactacagtgctgcctgggtggagtattacagacagcagggggcctactatggccag
ggtgcacagcagacaccggccccaggccttcagagaggacaccctttagttgaagatttt
tga
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