Oncorhynchus keta (chum salmon): 118385305
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Entry
118385305 CDS
T09424
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118385305
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
118385305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
118385305
NCBI-ProteinID:
XP_035628231
LinkDB
All DBs
Position
6:complement(27135255..27235490)
Genome browser
AA seq
2156 aa
AA seq
DB search
MTTAANWVANGASLEDCHSNLFSLAELTGIKWRCYSFRGGGEYGPVISAPAQDDPVLRSF
IRCVQANLLCVWRRKVKPDAKELWIFWWGDEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKDFVRIGKWFVKPYELEEKHMGTSEHLSCSFTFFLHGESNVCTS
VEVAQHQPAYHITDDHTRLAQISSAPVQVILSPYGLAGSLTGQAYKMSDPAVRKLMEEWS
YFYPMVLQRHREGGAGTGGMGAEREGTDRPYDPHSHVAVEVIVGGVRMIYPAAFVLVAQG
DLPVEEPPPAPGAQGGSRDPSHCSIPLTPPTSPEQPCSADSGFVTTVSSVLPAQESAMGV
TNSPKHSGKKLTNQVVHQAWKECYLNQLQHKCSGPSSVTPKKEAPNGVPTWDFTDPEERA
PCSCSRLKQQKQQQQTNTSSANPLSGANPTPSSGPALPPPSLPKHKATDKPEKADKQPKR
AATMTPFHHRLSVGQEACLEQDSSGGSQLGLVSLDPPLDPMPSCKYPKPLSAGRKAPESL
LHSPVSPLPPTLSPHPRGGQDPEVLDTSVGMAPCPDGASGMGGMEPSETALYAAPLGPRE
REAGAGWWRGFRTPRDDKAEFRPPELPSDRVEVKTETQATEGVALKRLFMQTQKRFKISE
ECVRAHIQTLGLLHQPGDPGDDPYDFKEGDIEYSFPTSKRLKGQGRDPSKRGPKGEEISN
GALPDGKDAMSIFSSAPKADDDSPQDDDAAAKAQNPSLTRETDLVVLISDLENIFDEDEE
ELRTACPNQHTARVLVSGSEDRREGRVAVPYPSTVDLQRMFPTPPSLEQHPAFSPIMTYR
DTPSQEPPAPSVGSDHPLGPLSSTQLQEYRMEVEEGMASPKPEDIKDFSFVYRVPSVQPQ
MGCSMFAPLRTLPSQCLPPLKLPDQCYYRPSWALLPKMEHYSSLPPSHHTPFIRDGYVNI
PSVGDQEYAQLSASALSVGTTGGILPSPSPATPRFSVPTPRTPRTPRGVGTASGQGSVKQ
EGTGTELSSPTSTPSTSLPMSSVAEPHTSSPPIPEAHSLYAALLLSDSVLNVFKDRNFDS
CCICACNMNVKGADVGVYIPDSTLEDQYRCMCGFSAIVNRRLAHGTGLFLEDELDIFGRG
SEVGQAAERRLALCRRDPPMGDPRAKRPQDSSPAPSSVMVLLQQQCSQPISSLASMHLPP
SCSCNGRQGALLQSWMADKQWADGSDACVECYNALVQGQQYVDNPAGGKVDPAVVRSSTL
HSWPHTNMLDISMLSSQDVVRMLLSLQPYLQDAIQKKRMGRTWENIQHVQGPLTWQQFHK
MAGRGSYGSEESPEPLPIPTLLLGYYDYYDRNFLALSPLALPFWEKLLLEPYGGQRDVAF
LVLCPNSDTLLAGAQVFFQELSAVYETCRLGKHRPLAKVSRDGLVRVGAVDTETETEKEK
EKERQEEEQIDQWFTGPWAGQQHIDNLRKLQLYARACRRQLGPQLSALSLDSSLFIPPKH
QPPLATTPSSAQPAPSSSQLPSGPGAPAEGELAAAPSSGSTPTPTAAASDQPGPAEITQG
GAAEAKTNPNATPPPPSQPAETPESLAERERIGIPTLADSADSHAHPPAIVIYVVDPFLC
SGGARDGGGGGEEEEGEEVEAGSVWLLGLMRCYTEMLKTLPESMRPALVLQVVPCQYLLQ
PASGESPLYLQHLRSLAFSAYSQCRRLLPTKTHIKSLTGFGPASTLESVLKSPEHPSPLQ
GYSPPYILGPTRAKMPEPGEVWAEITPRYNVLFVGYCLSHDQRWILVSCTDQQGELLETC
IINIDVPNRVRRPKVSARKMGLQKLWDWCVGIIQMTSLPWRIVIGRLGRLGHGELKDWSV
LLGEHSLHSISRQLKEACRMCGISSADSPSILSACLVAMEPQGSIVVMPDAVTMGSVFGR
STALNLQTSQLNTPQDASCTHILVFPTSATTQLAASSYPTEDNADDMFDLPFPDELENDI
GHDILNLHPSPNTSPVPSPGSPSGMGGSSHFQHNRSQGERLLSRENPPEELKQQPLALGY
YVSTAQADSLPHWFWASCPQAQNQCPLFLKASLHHHISIATAQSDEPTQTSSDKTAKRTP
HPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHLAVLTQMYNAILNML
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcagcgaattgggtggctaacggggcaagccttgaagactgccactccaac
ctcttctctctggcggagctgacgggcatcaaatggcggtgctacagcttccgcggcggt
ggcgaatacggaccggtgatctcagcgccggcacaggatgacccggtgctgcgcagcttc
atacgctgtgtgcaggccaacctgctgtgtgtatggcgccgcaaagtcaagcctgacgcc
aaggagctgtggatcttctggtggggcgatgagcccaacctctccgacgtcatccatcac
gagctggaagtggctgaggagggactatgggagtgtgggctgtcatatgaatgccggacc
ctcctgttcaaggccattcacaacctgctggagaggtgtctgatggacaaggactttgtg
cggattgggaagtggtttgtcaagccatacgagctggaggagaagcatatgggcaccagt
gagcacctgtcgtgctccttcaccttcttcctgcatggggagagtaacgtgtgcaccagc
gtagaagtcgcccagcaccagcctgcctaccacatcactgacgaccacacccgcctggcc
cagatctcctcagcccctgtacaagtgatcctgagtccgtacggtctggcgggctccctg
actggccaagcctataagatgagtgacccagctgtaagaaaactgatggaggagtggagc
tacttctaccccatggtgcttcagcgccacagagaagggggcgcaggcacggggggcatg
ggcgccgagagggagggcacagaccgaccttatgacccacacagccatgtggccgttgag
gtcatcgtaggtggtgtgaggatgatctacccagcagcctttgtgctggttgcccaaggc
gacctgcctgtggaggagcccccacctgcaccgggagcccaggggggcagtagagaccca
tctcactgcagcattcccctcacaccccccacttcacctgaacagccctgctcagcggac
agtggctttgtgacaacggtgtccagcgtcctccctgcccaggagagtgccatgggggtc
accaatagcccaaagcattctgggaagaaactgaccaatcaggtggtgcatcaggcgtgg
aaggagtgttatcttaaccaactgcaacacaaatgcagtgggcccagtagcgtgacgcca
aagaaggaggcgccaaatggggttcccacctgggacttcaccgacccagaggagagggca
ccatgcagctgctccaggttaaagcagcagaaacagcagcagcagaccaacacctcctct
gccaaccctctgtctggtgccaaccccaccccctcctctggcccggccctcccccctccc
tccctgcccaagcacaaggccacggacaaacccgagaaagccgacaaacagccgaagaga
gccgccaccatgacccccttccaccaccgcctctctgtgggccaggaggcctgcctggaa
caagactcatctggagggtcccagctcggcctagtcagcctggaccctcccctggatccc
atgcccagctgcaagtaccccaagcccctttccgccggcagaaaagctccagagtccctg
ctccactcccctgtctccccattaccccccacactcagcccccatccacgggggggacag
gaccctgaggtactggacacctctgtgggcatggccccctgtccggatggggcgtcaggg
atgggggggatggaacccagtgagacggctctgtatgcagcccctctggggcccagggag
agggaggctggggcaggctggtggaggggcttcaggactcccagggatgataaggctgag
ttcaggcctccagagctccccagtgacagagtggaagtaaagacagagacgcaggccact
gagggagttgcactgaagagactattcatgcagacacagaagcgcttcaagatctcggag
gagtgtgttagggcccacatccagaccctgggtctcctgcatcagcctggggaccccggg
gatgacccctacgacttcaaggagggagacatcgagtacagcttccccacctccaagaga
ctgaagggccagggcagagaccccagcaaaagaggccccaaaggagaggagatcagcaac
ggtgcactgcctgatgggaaagacgccatgtccatctttagctctgctcccaaagctgat
gatgactcaccgcaggacgatgatgcggcggccaaagcccaaaacccttctctaaccagg
gagactgatctggtggtcctcatctcagacctggagaacatcttcgacgaggatgaggag
gaacttaggactgcttgccccaaccagcacacagccagggtcctggtatcaggaagtgaa
gatcggagggaagggagggtggctgtgccctatccttcaacagtagacctccagcgcatg
tttcccacacccccttccctggagcagcacccggccttctcccccatcatgacataccgc
gacacccccagccaggagcccccagccccctcggtgggctccgaccaccccctgggcccc
ctgtcctccacccagctccaggagtaccggatggaggtggaagagggcatggccagtccc
aaacctgaggacatcaaggacttctcatttgtgtaccgtgtcccctccgtccagccacag
atgggctgctccatgtttgctccgctgcggaccctccccagccagtgtctgccccccctc
aagttgcctgaccagtgttactaccggccttcctgggccctgttgcccaagatggagcac
tactcctccctgccgccctctcatcacaccccattcatcagagatggatatgtcaacatc
cccagtgttggggaccaggagtatgcccagttgagtgccagcgccctgtccgtgggcacc
accggtggcatcctcccctcaccctcccctgccaccccccgcttttctgtccccacccct
cgtaccccccgcacccccagaggcgttggcacggccagcgggcagggctcggtgaagcag
gagggcaccgggacagagctgagctcccctacctccacgccttccaccagcctgcctatg
agctcagtagctgagccccatacgtccagccccccaatacccgaggcccacagcctgtac
gccgcccttcttctctctgactcagtcctcaatgtcttcaaagaccgcaactttgacagc
tgctgcatctgcgcctgcaacatgaatgtgaagggcgccgacgtgggcgtgtacatcccc
gactccacgcttgaggaccagtaccgctgcatgtgcggcttcagcgccatcgtcaaccgc
cggctggcccacggcacgggcctcttcctggaggacgagctggacatctttgggaggggc
tcagaggtgggccaggcggctgagaggagactggcgctctgccgcagagacccacccatg
ggagacccccgagccaagcgcccccaggactcctcccctgccccttcctctgttatggtg
ctcctccagcagcagtgctcccagcccatctcctccctggcctccatgcacctccctcct
tcctgctcctgcaatggccgccagggggccctgctccagagctggatggctgacaagcag
tgggcggatggcagtgatgcgtgtgtggagtgttacaacgcgctggtacagggacagcag
tacgtggataaccccgccggagggaaagtagatccggctgttgtgaggagcagcactcta
cattcctggcctcacaccaatatgctggacatcagtatgctgtcatcccaggacgtggtg
cgtatgctgctgtcgctgcagccctacctccaggacgccatccagaagaaacggatgggc
cggacctgggagaacatccagcacgtacaaggaccgctcacatggcaacagttccacaag
atggctggacggggctcctacgggtccgaggagtcgccagagcctctgcctattcccacc
ctgttgttgggctactacgactactacgaccgtaacttcctggcgctgtcgcccctggcg
ctgcccttctgggagaagctgctgttggaaccgtacgggggacagagagacgtggccttc
ctggtgctctgccccaactctgacaccctactggctggggcacaggtcttcttccaggag
ctcagcgctgtctacgagacatgccggttggggaaacacagacccctggccaaggtgtcc
agagatggcctggtgcgtgtgggggcagtggacacagagacagaaacagagaaggagaaa
gagaaggagaggcaggaggaggagcagatagatcagtggttcacagggccctgggctgga
cagcaacacatcgacaacctcagaaaacttcaactctatgcccgagcctgcagaaggcag
ctaggtccacagttgtctgccctgtctttggacagtagtctgtttataccccccaagcat
cagcctcccttagccactacgccctcctcagcccagcctgccccctcctccagccagctc
ccctctggccccggggcccctgctgagggagagctagcggcagcccctagctcaggaagc
acccccacccccacggcagcagcctcggaccaaccaggcccagcagagattacccaagga
ggggccgctgaggccaagactaaccccaatgccacaccaccaccacccagccagccagca
gagacccctgagagtttggcggagcgagaacgaatcggcattcccacgctggcggactcg
gccgatagccacgcccaccccccggccatcgtgatctatgtggtggaccccttcctctgc
tcaggcggagcgagggatggcggaggaggtggagaggaggaggagggagaggaggtggag
gcgggcagtgtgtggttactagggctgatgcgttgctacacagagatgctaaagacattg
ccggagagcatgagaccagctctggtgttacaggtggtgccttgtcagtacctgctccag
ccagccagtggtgagagccctctgtacctgcagcacctgcgctccctggccttctcagcc
tactctcagtgcagacgcctcctacccacaaagacacacatcaagtctctgaccggtttc
ggccccgcctccaccctagaatctgtgcttaagagcccagagcaccccagccctctacag
ggctactctcccccgtacattctgggtcctacccgtgccaagatgccggagccaggggag
gtgtgggcagagatcactcctaggtacaacgtgctgtttgtgggctactgcctgtcccac
gaccagcgctggatcctggtctcctgcaccgaccaacagggagagctactggagacctgc
atcatcaacatcgacgtgcccaacagagtgcggcggcccaaggtctcggccaggaagatg
gggctgcagaagttatgggactggtgtgtcggcatcatccagatgacctcactgccctgg
aggatcgtgattggtcggctgggcagactaggacacggggaactgaaagactggagcgtt
ctcctgggggagcactccctccactccatcagtcgccagctgaaggaggcgtgtcgtatg
tgcggtatctcctccgcggactccccctccatcctcagtgcctgcctggttgccatggag
ccccagggctccatcgtggtgatgccagatgcggttacaatgggttcggtgtttggtcgc
agcacggccctcaacctgcagacgtcccagctgaacactcctcaggatgcttcctgtaca
cacatcctggtattccccacctccgccaccacccagctggccgccagctcctaccccaca
gaggacaacgccgatgacatgttcgacctgcctttccccgatgagctggagaatgacata
ggacatgacattctcaaccttcacccttcccccaacacctccccagtaccctcccctggc
tccccctctggcatggggggaagctcacatttccagcataacaggagtcagggagagagg
cttctgtccagggagaaccctccggaggagctgaagcaacagcctcttgcccttggatac
tacgtctccactgcccaggccgacagcctgcctcactggttctgggcctcctgccctcag
gctcagaaccagtgtccactcttcctcaaggcatcgctacaccaccacatctccatcgcc
acagcccaatcagacgagcccactcagacgagctcagacaagaccgctaagaggacgcct
caccctctggactccaagaccacctctgacgtgctcaggtttgtgttggagcagtacaac
gccctctcgtggctgacgtgtaaccctgccacccaggaccgccgctcctgcctgcccgtc
cacctggccgtgctcacacagatgtacaatgccatcctcaacatgctctag
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